Eriocheir sinensis (Chinese mitten crab): 126997418
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Entry
126997418 CDS
T08870
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
esn
Eriocheir sinensis (Chinese mitten crab)
Pathway
esn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126997418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esn03019
]
126997418
03012 Translation factors [BR:
esn03012
]
126997418
Enzymes [BR:
esn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126997418
Messenger RNA biogenesis [BR:
esn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
126997418
Translation factors [BR:
esn03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
126997418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
AAA_14
nSTAND3
ATPase
ABC_tran
AAA_19
NB-ARC
IGF2_C
TsaE
AAA_16
PhoH
NACHT
NPHP3_N
PTPlike_phytase
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
126997418
NCBI-ProteinID:
XP_050714457
LinkDB
All DBs
Position
12:complement(12890919..12931389)
Genome browser
AA seq
1090 aa
AA seq
DB search
MYGASRGDGGGGSSQGGGSWRDDRGGSWRDDRGGRKGGGGGGGGGGGGGGRGRGGGGGGG
GGGGKGRGRGRGGMRHPPGLTGREIGLWYAKKGREKAEKSEEHNLPSISMNANQVHNVGR
TLDSLDGGGGSGARHNHPPSRDDQLGQEWDQRLSFIKKLDFDEGYDVGAGSSHANVKQEL
HVKQELHVKQEVDVFSNPDSWMQENAQKRKRSSGEFERKQRGDSLTEQLNNIQESDFKRA
YLANVYGNQLRDSGGLEAMKEGSRALHRRSDVDERLYEDLLAQRNSQMYQRMLEVRKKLP
SYEMRDEIVNTINSNQVVVLSGETGCGKTTQVAQFIQEDAISSGHGSVCRIVCTQPRRIS
AISVAQRVADERGEKLGRSVGYQIRLEAVLPRNEGSILYCTTGIVLQWLQSDPLLAQVSH
LVLDEIHERDMLSDFIICIAKDLIKVRPNLKVILMSATLNAEQFSEYFGGCPMIHIPGFT
YPVKEYYLEDVIETTKFKFQDKKELPIWKRRSNNNQKSKSFEEMITPYLRDLDKRQQYSY
QTLQELYKPASEELNLELVLELLRHISRQPMGAVLVFLPGWDMISKLHNMIQDDTMFNSR
NYLVIPLHSMMPTVSQREVFNTPPKGVRKIVLATNIAETSITIDDIVYVIDGGRIKMKNY
DKEANLVTLLAEWVTLANARQRRGRAGRVQAGICYHLYSRAREALLEDYPLPEIQRTRLE
EIILHIKILKLGSVRPFLSKVMMPPDSSVVEISLQMLQAINALDRDENLTPLGFHVARLP
VDPLTGRMLLMGAIFSCISPVLTVAASLSFKDPFVTPLGKERQVDEIKRKLCKSMRSDHL
LLVKVFEGWEQACQHRDERNYCWDNFLSGSILNQLKNMRRQFMGHLYDNKFVNTTNPNGA
EVNRNSENTALVRAIITAGLYPNVARILPHKGKPKPNKPLRIRTAQERSVVLHPKSVNEQ
EREFDYPWLMYREKIKSTKVFIHDSSMVPNYPLLFFGEKLNYNHKESVINVDGFVRVRSS
SHVAQLVQSLRNELDHLLEYKISHPGITRWDRNSKEGMLLNTIVDLISSERGTSQDTCYY
DSDDQDDDGN
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgtatggggcatctaggggcgatggtggtggtgggagttcccaaggtggtggaagctgg
agagatgatagaggtggaagctggagagacgatagaggtggaagaaaaggtggtggtgga
ggaggaggaggaggaggaggaggaggagggagaggaagaggaggaggaggaggaggagga
ggaggaggagggaaaggaagaggtaggggaaggggaggaatgaggcatccacctgggcta
acaggcagagaaataggcttatggtatgccaagaaaggccgtgaaaaggcagaaaagagt
gaggaacataatttaccatcaatttctatgaatgccaaccaagtgcataatgttggacgc
acactagactccctggatggtgggggagggtcaggtgctagacataaccatcctccctct
agagatgatcagctgggccaggagtgggaccaacgcttgtcttttattaagaaactggat
tttgatgaaggatatgatgtgggtgctgggagcagtcatgcaaatgtcaagcaagaattg
catgtcaagcaagaattgcatgtcaagcaagaagttgatgtcttttctaacccagatagt
tggatgcaagaaaatgcacaaaaacgtaagagatcatcaggggagtttgagagaaagcaa
cgtggagactccttgacagagcagctgaacaatatccaagagtcagatttcaagcgggcc
tatcttgccaatgtctatggcaatcagttgcgtgatagtgggggcttggaggccatgaag
gaaggatcacgggccttgcatcgacgatcagatgttgatgaacgtttgtatgaagatctg
ttggctcagaggaatagccagatgtaccaacgtatgctggaggtgcgtaagaaactccca
tcctacgagatgagggatgagattgtcaacaccattaacagtaaccaagttgtggtgctg
agtggagagactggttgcggcaaaacaacccaggttgctcagtttatccaggaagatgca
atatcatcagggcacggttcagtctgtcgcattgtatgtactcaaccccgccgcatctct
gccatctctgttgctcagcgggtggcagatgaacgtggggagaagctggggagaagcgtt
ggctatcagatcaggcttgaggcggtgttgccacgaaatgaagggtccatcttgtactgt
accacaggcattgtgctccagtggcttcagagtgacccactgcttgctcaggtgtcacat
cttgtgctagatgagatacatgagcgagatatgttgtcagattttattatttgcattgcc
aaagatctcatcaaagtgcggcccaatttaaaggttatactaatgagtgctacactgaat
gctgagcagttctctgaatattttggaggatgcccaatgatccacattcctggctttaca
taccctgtcaaagaatattatcttgaagatgtaatagaaactaccaaatttaaatttcaa
gacaaaaaggagttacctatttggaaaagaaggagcaacaacaatcaaaagagcaaaagc
tttgaagaaatgatcacaccctacctcagagatcttgataagaggcagcagtattcttat
cagaccttacaagagttgtacaagccagcaagtgaagagctgaatttggagttagtgttg
gagctgctgcggcacatcagcaggcagccgatgggagcagtgctggtgttcctgccgggc
tgggacatgatctccaagctccacaacatgatacaggatgacacaatgttcaactcacgg
aactacctggtaattcccttacactccatgatgcccactgtaagtcagcgtgaagtcttc
aacactccacccaaaggtgtaagaaaaattgtccttgctactaatattgctgaaaccagt
ataaccattgatgacatagtgtatgttattgatgggggccgtatcaagatgaagaattat
gacaaagaggctaacttggtaacattgctagcagagtgggtcacccttgccaatgccaga
caaaggagaggacgggctggcagagtgcaggcgggaatatgttaccacctgtactctcgg
gcacgagaagcgttgttagaagattacccactgcccgagattcagcgtacccgccttgaa
gaaattatcttgcacataaaaattctcaaactgggttctgtgagacccttcctgtctaag
gttatgatgcctccagattcatctgttgtggaaatttccctccagatgctgcaagccatc
aatgcactggacagagatgagaacttgaccccacttggctttcatgttgcacgtttgcct
gtggaccctctcactggccgcatgctgctcatgggtgccatcttttcctgcatttctcca
gtcctcactgtggctgcttctctgtccttcaaggatccttttgtgactcccttgggcaaa
gagcgtcaagtggatgaaatcaaacggaaattgtgcaagagtatgcgaagtgaccacctg
cttctggtgaaggtgtttgaaggatgggagcaggcatgccagcaccgtgatgaaaggaat
tattgctgggacaatttcctgtctggttcaatattaaaccagctgaagaacatgaggagg
cagtttatgggtcacctgtatgacaataagtttgtcaacacaactaaccccaatggagct
gaggtcaatagaaactctgaaaacactgcactggtacgagccatcatcactgcaggcctt
taccccaatgttgccaggattttgccccataagggtaagccaaaaccaaacaaaccactc
aggattcgaacagcgcaggagcgaagtgttgttctccatcccaagtcagtcaatgagcag
gagagggaatttgattacccatggctcatgtacagggagaagataaagtctaccaaggtg
ttcatccatgatagttcaatggttccaaactatccacttctcttctttggggaaaagctg
aactacaaccacaaagaaagtgtgatcaatgtggacggctttgttcgtgtccgcagctcc
agccatgtagcccagcttgtgcagagtttaagaaatgagttagatcaccttcttgagtac
aaaatcagtcaccctggcatcacccgctgggatagaaacagcaaggagggcatgctgctg
aacaccatagttgacttgataagcagcgagcgaggcacctctcaggacacctgctactat
gactctgatgaccaagacgatgatggcaattaa
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