Eriocheir sinensis (Chinese mitten crab): 126997877
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Entry
126997877 CDS
T08870
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
esn
Eriocheir sinensis (Chinese mitten crab)
Brite
KEGG Orthology (KO) [BR:
esn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esn03019
]
126997877
Messenger RNA biogenesis [BR:
esn03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
126997877
3'-5' decay
Other 3'-5' decay factors
126997877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
UvrD-helicase
ResIII
zf-CCCH
PAM2
zf-C2H2_jaz
Peptidase_M35
AAA_22
zf-C2H2_2
MOV-10_Ig-like
DUF4187
T2SSE
Zn_ribbon_TOP3B
Motif
Other DBs
NCBI-GeneID:
126997877
NCBI-ProteinID:
XP_050715047
LinkDB
All DBs
Position
13:complement(3050552..3127465)
Genome browser
AA seq
1743 aa
AA seq
DB search
MDRAKKMPFQEVSDQAQVSPASLSPPASSRQKGRRKKRDSVMDPQKASNPHSPKSDSSEG
DSITTTIANANSSADGEATESTRLHGGEGEEEGSTSPSSASGIPQRLHCVYCNVYYSTKA
DLQTHCRSQDHQMTIMSDEGRDWSHRPPPRGLGAEDYSLCPTYRAAQTCRMGDQCVEAHS
EAELAEWQERFEYRAMKLERAREKQLHGASYADHLLERLSLTQQQDTLITEKTDGIISHL
NPEPNLRVSQKPSSREWVISLQPPSPLRVVSLLHDAHRNHFSISDVTFLDVHRQLQWSCV
PENSQEWTSTEQDPQAGPDLKYKVTISFRTAIYGTFRQAVVFDYGVEPVAMQRLCVDVIP
LEDLGALEETKRTVLTRSERWCEENVDIVPFDRKPHDLSPDDRSILASYPPPTNENFVFT
QTSMERFPTKNNYRSRMHDLLNIEELAQFDLVSRFNIKTTLQITSGYMLLPSTVSTAKYS
RPGELFGKLELSSEISEDSHHGRLVLSNCNSMLVATVSETSQSSADSERGQGGNTSKPRR
CIHEVLIEDKTKKEIYLRFSERSVAALNLKDDEEATVEVQFQLNRLPLCEMHAALDRLPS
LDMIFPDVTVEPTIPWSPIKQWGETLDAKLNPKQKEALVAITAPYGLILPPILIIGPYGT
GKTHTLAQGIKQILRQPNTRILICTHSNSAADLYIKDYLHPYVKAGHSEARPLRIYYRNR
WVTTVHPDVQEYCLIETDVNVRRFVTPTEEEILAHRVIVATLNTSRIIASLKFEKGVFTH
ILIDEAAQAMECETLMPMALAKPDTRLVLAGDYMQLSPEVFSPFCEERGLGTSLLERLYD
LYPADSPCKIMLVENYRSHSAIIKYTSDLFYEGRLVASGKQTAHPKFFPLTLFTARGEDF
QDPSSTAFHNNSEVYEVCERVGEIISHWPKSEWGPVGESSIGVVTPYADQMVRIRAELRK
RKLYKINVERVLNVQGKQFRVIILSTVRTRHTCKAGDEGLDFGFLSNAKLLTTAITRAQS
LVAVVGDPVSLCSVGKCRKLWERFVQLCSEAGSLYGISWSALRSQLDGVELKKTYILNPL
APEFIPRYLCYPSLRPLPVVPAVPPYINIYPPYNSYISTNYQVHPMVGPQALQYLPQASS
LASHWSPMPYGPMPKPQIVRPAPTRLGQPLIAAPHPLRQAVVTTATAAPFLEASGYGYSL
PPAVVPMYPYQSGGGPNHRLPLIRRPTDLDPVSRSLYMTALPAHYQHLKQTGQPPGMLAH
QASLRGTRFTRAIHMPPVQRGMRLPTQTEGEKTYQFLNNVHFPERQLTANPSPLIRLPQS
RAESESPMSTQSWESSHSSPNDGGLSSRLQTIPHPPPPPHPPPHPPHPPPAPPPSHPLPN
LPYPNPHYTHHPRLPAHCDLHPSMAFHHFPHPQPTHPAPKTQPQSNGRIPREEQPPDIPD
VVRAIDELIGDLPSSKQTPWPAFECDAEEGRGSTRVSSPPLDSWQGNMSVRPPTHMPPPP
VSPWSASSSSSSSAIKIDVGKMVTVQELEASLHSRHQNNTSALTPPVLSRAPGGPLGNAK
DFERPMDAARGPVRSPTEAEDLQGKGNCTSIPPPPGFSGINRLVDPISRLDLSETAPGYR
TPSLPLYLRRGSREASSRGLPPGGEAPDRTVYSLRDNLRMSTTTHGELGLKNMAQSIDSF
GFTGSIDVDRRDSKTYAGVLRSSLQPPAAGSEANKGEETVYSQNELGGKNLLSGNSPFYQ
YFP
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atggacagagccaagaaaatgccattccaggaagtcagtgatcaagcccaggtctccccc
gcctccttatctcctccggcttcctcccggcagaaggggaggagaaaaaagagggacagt
gtcatggatccacagaaagcatctaacccccacagccccaagtcagactcatctgaagga
gactcaatcaccaccaccattgccaatgccaacagttctgcagatggcgaggctacagag
tcaacccgtctccatggtggtgagggggaggaagaggggtccacatccccatcgtctgcc
tcgggcatccctcagaggctccactgcgtgtactgcaatgtttactatagtaccaaggca
gacctccagacccactgtcgcagccaagaccaccagatgaccatcatgtcagacgagggg
cgggactggtcccatcgtccgcctccccgtggccttggtgcggaggactacagcctctgt
cccacgtaccgtgctgctcagacctgccgcatgggggaccagtgcgtggaggctcacagc
gaggcagagctggctgagtggcaggagcgcttcgaataccgtgctatgaagctggagcga
gcacgagaaaaacaacttcacggtgcctcgtatgctgaccatctgctggagcgactctct
ctcacgcagcagcaggacaccctcatcacagagaagacggacggaatcatcagtcatctg
aaccctgagcccaatctccgagtttctcaaaagccaagcagtcgtgagtgggtcatctcc
ctgcagccgccctctccgctgcgagttgtgtctcttctccacgatgcccaccgcaaccac
ttcagcatctcagatgtcaccttcctcgacgtgcatcgccagctgcaatggtcctgcgta
cctgaaaactcccaggaatggactagcactgagcaagatcctcaggcagggccagacctc
aaatacaaagtgaccatcagtttccgcacggcaatctatggcaccttccggcaggccgtt
gtgtttgactatggtgttgagcctgtggcaatgcagaggctgtgtgtggacgtgatcccc
ttggaggatcttggggccctagaggaaaccaagcgcactgttcttactcgaagtgagcgc
tggtgcgaggagaatgtagatatagtgccgtttgaccgcaagcctcatgacctcagccct
gacgaccggagcatcctggcttcctacccgccccccaccaacgagaactttgtcttcacg
cagacctccatggagcgcttccccacaaagaacaactacaggagtcgtatgcatgacttg
ctcaacattgaagaacttgctcagtttgatctggtctctcgttttaacatcaaaactacg
cttcaaatcaccagtgggtacatgcttctgccttctacagtctccacagccaagtactcc
cgcccaggcgaactctttgggaagctggagctctcctcggagatttctgaagactcccac
catggccgtttggtgttgtccaactgcaattctatgcttgtcgcaactgtgagtgaaacc
agccagtcttcagccgactcagaaagaggtcaaggtgggaacacttccaagccccgaagg
tgtatccatgaggttctcattgaggataaaaccaagaaagaaatctacctcaggttctct
gaacgttctgtggcagccctcaatctgaaagatgatgaagaggccacggttgaagtccag
tttcagttgaatcgcttgccactctgtgagatgcacgctgccctcgaccgcctgccatca
cttgacatgatcttcccagatgtgacggtggagccaaccattccttggagtcccatcaag
caatggggagagactttggatgccaagctgaatcccaaacaaaaagaggctttggttgcc
atcacggctccctacggcctcatcttgcctccaatactcataattggaccgtatggaaca
gggaagacccacacgctggcgcagggcatcaagcaaatactgcggcagcccaacacccgc
atccttatctgcacccactccaacagcgctgcagacctttacatcaaggactatctgcac
ccttatgtcaaggcagggcacagtgaggcgcggccactcagaatatactaccgcaatcgc
tgggtcaccacagtacacccagacgtgcaggagtattgcctgatagaaaccgacgtcaac
gtgaggcgctttgtgactccgactgaggaagagattctggcgcaccgggtgattgtggcg
actctcaacacgtcccgcatcattgcctcactcaagttcgagaaaggagtgttcacgcac
atccttattgacgaagcagcgcaggccatggagtgtgagactttaatgccgatggcgctg
gccaagcctgacacacgcctggtgttggccggggactacatgcagctcagcccggaggta
ttctcccccttctgtgaggagagaggccttggcacgtccttgcttgagcgcctctacgac
ctgtaccccgctgactccccctgcaagatcatgctggtggaaaactaccgctcacactcg
gccatcatcaagtacacatctgacctgttttatgaaggccgcctcgtagccagcggcaag
cagacggctcatccaaaattcttccctctcaccctcttcactgctcgaggagaagacttc
caggacccgagctcaactgcattccacaataattcagaggtgtatgaagtgtgtgagcga
gtgggtgagatcatcagccattggcccaagtcagagtggggaccagtaggggagagctcc
attggtgtggtgactccctacgctgatcagatggtgcggatcagggcggagctgaggaaa
cggaaactgtacaagatcaacgtggagagagttttgaatgtccaagggaaacagttccgt
gtcatcattctgtccactgttcgtacccgccacacgtgcaaggcaggagatgaaggcctc
gactttggtttcctgtccaatgcaaagctgctcaccactgccatcacccgggcacagagc
ctggtggcagtggtgggtgacccagtctccctctgctctgttggcaaatgccggaaactg
tgggagcggtttgttcagctgtgttctgaggcggggtcgttatatgggatctcctggtca
gcactgcgctcacagctggacggcgttgaactaaagaagacctacatactgaaccccctg
gcgccggagttcatccctagatacctgtgctacccatctctgcgtcctctgcctgttgtg
cctgccgtgccgccctacattaacatatatcctccttataattcatacatctcaaccaac
taccaagtgcaccccatggtgggaccccaagctctgcagtacctccctcaggcctcatct
ttagcctctcattggtctcccatgccctacggacccatgccaaaacctcagattgttcgg
cctgcaccaaccaggctgggccagcccctcatagctgcaccgcatcccctacggcaagct
gtcgtcacaacagccaccgctgcaccttttcttgaggcctcaggctatgggtactccttg
cctccagcagtggtgcccatgtacccataccagtcaggtggaggacccaaccaccgacta
cctctgattcgacggccaacggacttggacccagtgagccgcagcctgtatatgacagct
ttaccagcacactaccagcacctcaaacagacgggtcagcctcccggcatgctggctcat
caggctagcctgagggggacacgtttcactcgtgccatccacatgccaccggtccagcgt
gggatgcggctgcccacgcagactgagggggagaagacataccagttcctcaacaatgta
cacttccctgagcgccagctgaccgcaaacccttcgcccctcattcgcctgccacagtcc
cgcgctgagagtgagtcgcccatgtcaacacagtcttgggaaagttcacactcgagtcca
aatgatggagggctgagtagcagacttcagacaatacctcatcctccccctcctcctcat
ccccctccccatcctcctcatccccctcctgctcccccaccctctcaccctctccccaac
ctcccgtaccctaacccgcactacacccaccaccctcgcttgcctgcacactgtgatctc
caccccagcatggcgttccaccattttccacaccctcagcccacccaccccgcccccaaa
acacaaccgcagtccaatggaaggataccaagggaagagcagcctccagacattcctgat
gtggtccgtgccattgacgagctcattggtgatttgccctccagcaagcagactccctgg
cctgcctttgagtgtgatgcagaggaaggcaggggcagtacaagggtaagtagccccccg
cttgactcctggcaaggcaatatgtctgtcagaccccccacacacatgcctccccctcct
gtcagcccatggtctgcttcctcttcctcatcctcctctgctattaaaattgatgttggg
aagatggtgaccgtgcaagaattagaggcgtctctgcacagccgtcaccagaacaacacc
tctgctctcaccccgcctgtcctctcccgagctcctgggggacctttagggaatgctaag
gattttgagaggcccatggatgcagccaggggtcctgtgagatcaccaacagaggcagaa
gacttgcagggtaaaggaaactgtaccagcatcccaccccctcctggatttagtggcatc
aaccgtttagtggatcccatctctcgactagacctctcagagactgcccctggataccga
accccaagcttgcctttgtacctgaggcgtggcagcagagaggcctcaagtcgaggtctg
ccaccaggaggtgaggcaccagaccgtacagtgtattccctcagagacaaccttcgcatg
tccaccaccactcatggagagcttggcctgaagaacatggcacaatccattgattccttc
ggtttcactggttcaattgatgtggacaggagggacagcaagacttacgctggtgtgctg
cgctcctcccttcagcctcctgctgctggctctgaggccaacaaaggtgaggaaactgta
tattcacaaaacgagctaggtggcaagaatctgctctctgggaatagtcctttttaccag
tacttcccttag
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integrated database retrieval system
