Eriocheir sinensis (Chinese mitten crab): 126999483
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Entry
126999483 CDS
T08870
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
esn
Eriocheir sinensis (Chinese mitten crab)
Pathway
esn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
esn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126999483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esn03019
]
126999483
03041 Spliceosome [BR:
esn03041
]
126999483
Messenger RNA biogenesis [BR:
esn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
126999483
Spliceosome [BR:
esn03041
]
Complex B
Other components
Prp19-related factors
126999483
Complex C
126999483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_2
TPR_12
NRDE-2
TPR_CcmH_CycH
TPR_8
DALR_1
Motif
Other DBs
NCBI-GeneID:
126999483
NCBI-ProteinID:
XP_050718080
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All DBs
Position
16:18526386..18538115
Genome browser
AA seq
861 aa
AA seq
DB search
MLMDASTIIIETDDLQYEEELLRNPFSVKHWLRYTEHKKDAPSDKLNKVYERALLQMPGS
YKLWHQYVRLRMQQVKGRCITDPEYESVNNTFERALVFMHKMPRIWIDYCQFLMSQRKIT
RTRKTFDRALCALPITQHNRIWPLYLKFVMIYNIPETAVRVWRRYLKLCPEDTEDYISYL
ISIGLLEQAAKKYEWCVNTDTFTSKYGKSKHQLWSELCELISKNPQETSLKNAEAIIRHG
LQRYTDQVGMLWNSLAEYYIISALFERARDVYEEALRSVMTVRDFTQVFDSYAQFEELML
KRRMEEVGFEAEDGDDTDIEIELRLARYEDLMQRRPLLLNSVMLRQNPHNVLEWQKRVTL
YEGRPKMIVATYMEAVKTIEPKQATGKLYSLWVNFAKFYEDNGQIMDARIIFQRATEVSY
VRVDDLASVWCEWAELEIRHDNEEEALKLMKRATAPPPHKVAYNDESEPVQRRVYKSLKL
WSMYADLEESLGTFKSCKAVYDRIIDLRIATPQIIINYGMFLQENNYYEEAFKAYEKGIA
LFKWPYVYDIWNTYLTKFLQRYQGTKIERARDLFEQCLEKCPPNFAKNLYLLYAKMEEEH
GLARHAMQVYSRATKAVPPEEKLAIYNIYLQHAQQIYGITKTREIYQEAIEDLPDEGTRE
MCLRFADMERKLGEIDRAREIYAYCSQMCDPRLTQEFWARWTDFEVAHGNEDTMKELLRI
KRSMQAKYNTQVNMMSAQMLASADTVAGTVSDLAPGAKDGMRMLEARAVAMNQLEEHGGP
PQMPPPSTTAAAGGGSKIMFVRGTTSKREDEVADAARTANPDEIDIDEEDEDDDDDDDDL
PQTREIPSTLFGQLKKEVDKN
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgttaatggacgcctcaaccatcatcatcgagacagacgaccttcagtatgaggaggag
ctgcttcgtaacccgttctcggtcaagcattggctgcgctacaccgaacacaagaaggat
gcgccgtcggacaagctcaacaaggtgtacgagcgggcgctgctgcagatgcccggcagc
tacaaactatggcaccagtatgtgagactcaggatgcagcaggtgaaggggcgctgcatc
acagacccagagtacgagagcgtcaacaacaccttcgaacgagcgctggtcttcatgcac
aagatgcccaggatatggatcgactactgccagttcctgatgagccagcgcaagattacc
cggactcgtaagacattcgaccgtgccctgtgtgccctccccatcacccagcacaaccgc
atctggccgctgtacctcaagttcgtcatgatctacaacatcccggagacggccgtgcgt
gtgtggcggagatacctcaagctgtgcccggaggataccgaggactatatcagctacctc
atatccatcgggcttctggagcaggcggccaagaaatacgagtggtgcgtcaacaccgac
accttcacctccaagtacggcaagtccaaacaccagctgtggtctgaactgtgtgaactc
atctccaagaacccgcaggaaacgagcctcaagaacgccgaggccatcatccgtcatggg
ctgcagcggtacacagaccaggtggggatgctgtggaactccctcgccgaatactacatc
atcagcgctctgtttgagagggcgagagacgtttacgaggaggccctgcgcagcgtgatg
acggtgcgagacttcacgcaggtgttcgactcctacgcccagtttgaggagctgatgctg
aagcgccgcatggaggaggtggggttcgaggcagaggacggggatgatacggacattgaa
attgaactcaggctggcgcgctacgaggacttgatgcagaggaggccgctgctgctgaac
tccgtgatgctgcggcagaaccctcataacgtgctggagtggcagaagagggtgacactg
tacgagggacggccgaagatgatcgtcgccacgtacatggaggccgtcaagacaatagag
cccaagcaagccactgggaaactctactccttgtgggtcaacttcgccaaattctacgaa
gacaacgggcagatcatggacgcgcggatcatcttccagcgggccaccgaggtctcctac
gtgagggtggacgacttggccagcgtgtggtgcgagtgggcggagcttgagatacggcac
gacaacgaggaggaggcactcaagctcatgaagagggccacagcaccgcccccgcacaag
gtcgcctacaatgatgagagcgagccagtgcagcgccgcgtgtacaagtccttgaagctg
tggtccatgtacgccgacctggaggagagtctcgggaccttcaagtcttgcaaggctgtg
tacgaccgcatcatcgacctccggatcgccacgccacagatcattatcaactacggcatg
ttcctgcaggagaacaattactacgaggaggcgttcaaggcctatgagaagggcatcgcg
ctgttcaagtggccttacgtatatgacatctggaacacctacctcaccaagttcctgcag
aggtaccagggcaccaagattgagcgggcgagagacctctttgagcagtgcctggagaag
tgtccgcccaactttgccaagaacctgtacctgctgtatgccaagatggaggaggagcac
gggctggccaggcacgccatgcaggtctacagccgcgccaccaaggccgtgccacccgag
gagaagctggccatctacaacatctacctgcagcacgcacagcagatctatggcatcacc
aagaccagggagatataccaggaggccatcgaggacctgccagacgaggggacgagggag
atgtgtctacgtttcgccgacatggagaggaagctcggggagattgaccgggcgagggag
atctacgcctactgcagccagatgtgcgaccctcggctgacacaggagttctgggcacgc
tggacggactttgaggtggcccacggcaacgaggataccatgaaggagctgctgaggatc
aagcgctccatgcaggccaagtacaacacacaggtcaacatgatgtcagcgcagatgttg
gcgtcggccgacaccgtggccggcactgtgtcagatctggcaccgggtgccaaggacggc
atgcgcatgttggaagcacgcgctgtggccatgaaccagctggaggagcacggcggccct
ccacagatgccgccaccctccaccacagccgctgcaggcggaggctccaagatcatgttc
gtgcgcggcaccacgtcgaagagggaagacgaggtggctgacgctgctcggacggccaac
cctgacgagattgacattgatgaggaggatgaagatgacgacgatgatgatgatgacctt
cctcagacaagagaaattccatcaaccctgtttggccagctgaaaaaggaagtggataaa
aattaa
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