Eriocheir sinensis (Chinese mitten crab): 127001676
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Entry
127001676 CDS
T08870
Name
(RefSeq) collagen alpha-1(I) chain-like isoform X1
Organism
esn
Eriocheir sinensis (Chinese mitten crab)
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Gene cluster
GFIT
Motif
Pfam:
MamL-1
Motif
Other DBs
NCBI-GeneID:
127001676
NCBI-ProteinID:
XP_050722615
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Position
21:complement(10637190..10706957)
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AA seq
1363 aa
AA seq
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MADFQQGRQVVVDRLKRRLGHYRQNHNSVTSRFDTSIQTLYTDQQKQTILLKQRHIESKA
KKTNKKTNDNKKQDNSSLLATMGQSKMLARGHDQTTSSGETHENEPATKKQRLNNGAPPH
GGPLHGTPSHAGGPPPPHGAGLHPGASQSSGSSGDIGDLQMAQQLPNIKKTDSPVPLGGA
TSAVNGPSVDDVKKEQQDLDINILEEFDDFSNLGDIDDMGINFDQFMSDLDFDNMKQENS
NSGLADLVKEESVDNIFENEPSSVSSDSGVASGNANSQSPQVNMSKSGGTPTTSASPVFT
QYPGTPPVSHTSTPPTSFPQTSFNPTSTSTTSSSPTTFSAPSSVTKIRVGMGQSDMIPAA
QTLKQMAEQHQIKMVSAPNARPGFADYQLNNMNSPAGPGMMGQTGSIGNQMYNSNMNQTN
PMYNNQNSGMSEMEMKKRQLMQQQMVQQQVHQSQQQQQSQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQQPQQQQQQQPTGQQQGQMPAGMVPYQNRISPMGSFPSSSQPGTLTPQYQMAGA
MGTGVRGPYPGGPRGPSPIPPGSQGGGPSPIPAGVQLGGQMGADGKLSNEMFYQGQISSQ
YRMSPAQPPRYPGQQMMGPGGMMRHVSPAGSQMVGQSGQMMPRPPPPEYQQLIQQQQMMG
QPMSQAMSQMGQGMNQMSYQGMRPNMRPGMVANPMVNIGSNQMMGNMAQQTLPPNMPTMK
PGMVPTTTMNPTSSMPSTTMAGGTMPTMSVGTMSASNMSNSMGQVSTAGTMGMVSRNPMG
NSSILQRPRPPNVNIGPGPGGLNIGTQMPPSRPEWRQIMMQGGQGNVQIMGPMRPGYPQQ
QPQQGGMLNQQGQLIGIQRPPSQMMNMMAMQQGPSMQGGPGMQGNPSMQPGMQGGPGMQG
GPGMQGGPGMQGGPGMQGGPGMQGGPGMQGPGMQGGPGMQGGPGMQGGPGMPGGPGMQGG
PSMQGPRMQANMVAMTQQGQVRMGIHMSQAGGMGGGQVTSQYPGQQGQMSTMTQMPPGPN
QMMTNPTAQGRNPAAMAGMTGARSPAAMAQMSGPGHPMSPANRGQMGGASPVNMGQMSGP
GQAPSPANMGSMTHPRSPATMGQMHPRSPATMGQGGPARPLSNPGMGQGGPARPLSNPGM
GQQQGQQASQTASGGTTIGGQTTGSTPGPMNRGSPGGMTQASSGISSSGSGLNQNPSSLS
QNPGSMTQNSNSMNQNSGSINQTPGGMSQNSSGMNQSQSGINQNSSGMNQTPGGMNQANS
GPPGSRPNQSPMSQVQSIQGPGATGSQTNLTMNRVKGGTATVNSSQNTPQTSVASQRPAN
DSNNSVRTSQPSTPNPPPPTSSGNTPATDFEFDFGDFASLISD
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atggcagactttcagcagggcagacaagttgttgttgaccggctaaagcgtcgcctcggc
cactaccgccagaaccacaattccgtcacctctcgcttcgacacctccatccaaactctg
tacactgaccagcaaaaacagactatcttgctgaaacagaggcacatagaatctaaggct
aagaaaaccaacaagaaaaccaacgataacaagaagcaggataattcgtccttattagcc
accatggggcagtcaaagatgcttgcccgagggcatgaccagaccacatcgtctggcgag
acccacgagaatgagccagcaaccaagaaacagcggctcaacaatggcgctccccctcat
ggcggccccctccacggcaccccctcccatgcggggggccctcctcccccacacggggca
ggcctccacccaggggcctcccagtcctctggctcctcaggggatattggtgacctgcag
atggcacagcagctccccaatattaaaaagactgactccccagtgcctcttggaggtgcc
acctcagctgtcaacgggccttccgtggacgatgtgaagaaggagcagcaggacctggac
atcaacatcctggaagagtttgatgacttcagtaaccttggtgatattgatgacatgggg
atcaattttgatcagttcatgagtgaccttgactttgacaatatgaagcaggaaaacagt
aactctggcctggctgaccttgtgaaagaggaatctgttgacaatatatttgaaaatgag
ccatcgagtgtgagtagtgatagtggcgtagcaagtggtaatgccaattctcagagtccc
caagtgaacatgagtaagtctggggggactcccaccacctctgcctcaccagtgttcact
cagtacccgggaacacccccagtttcccatacctccaccccacctacctccttcccacaa
acctcattcaaccccacctccacctccaccacttccagctccccaactacgttctctgct
cccagtagtgtgacaaaaattcgtgtgggcatgggacagtcagacatgatccccgccgcc
cagacgctgaagcagatggctgagcagcatcagatcaagatggtgtcggcgcccaatgca
cggccaggctttgccgactatcagctgaacaacatgaacagtcctgctggccctggcatg
atggggcagaccggaagcatcggtaatcaaatgtacaatagcaacatgaatcaaaccaat
cccatgtacaacaatcaaaatagcggtatgagtgaaatggagatgaaaaaacgccaacta
atgcagcagcagatggtgcagcaacaggtgcatcagtctcagcagcagcaacaatcacag
cagcagcaacagcagcagcaacagcagcagcaacaacagcagcagcaacaacaacagcag
cagcagcagcagcagcaacaacaacctcagcaacagcagcagcaacagcccactggccaa
cagcagggccagatgccagcaggaatggtgccataccagaatcgcatctcccctatgggc
tccttccccagctcctcccaaccaggcaccctcacaccccagtaccagatggctggggcc
atgggcactggggtgagaggcccatatcctggaggtccccgcgggccatccccaatacct
ccaggctcacagggaggaggaccgtctcccatacctgcaggagttcaacttggtggtcag
atgggagctgatggcaaactaagtaatgaaatgttctatcagggtcagattagcagccag
tataggatgagcccagctcagccaccaagatatcccggccagcagatgatggggccaggg
ggcatgatgcgccacgttagccctgccggcagccagatggttggccagtctgggcagatg
atgccccgtcccccaccacccgagtaccaacagcttatacaacagcagcaaatgatgggt
cagcccatgtcccaggccatgtctcagatggggcaaggcatgaaccagatgagctaccag
ggcatgcggcccaacatgaggccagggatggtggccaaccccatggttaacattggctct
aaccagatgatgggaaacatggcccagcaaacgctgccacccaacatgcccaccatgaag
cctggcatggttccgaccaccaccatgaacccaacttcaagcatgcccagcacaaccatg
gctggtggcaccatgcccaccatgagtgttggtaccatgtcagccagcaacatgagcaac
agcatggggcaggtgagcacagctggcaccatgggcatggtcagccgcaaccccatgggc
aacagcagcatcctccagcggccgagaccgcccaacgtcaacatcggtccaggccccggc
ggcctcaacataggcacacagatgcctccatcaaggccagagtggcggcagatcatgatg
cagggcggccaggggaacgtgcagatcatgggtcctatgcggccgggctacccccagcag
cagccacagcaaggcggcatgctaaaccagcaaggtcagctgattggtattcagcgacca
ccaagtcagatgatgaatatgatggccatgcagcaaggcccctccatgcagggcggccca
ggcatgcaaggcaaccctagtatgcagccagggatgcagggcgggccagggatgcagggc
gggccagggatgcagggcggaccagggatgcaaggtggcccaggcatgcagggagggcca
ggcatgcagggtgggccaggaatgcaagggcccgggatgcaaggaggacccggtatgcag
ggtggaccagggatgcaaggtgggccaggcatgccaggtggcccagggatgcaaggaggc
ccctccatgcagggcccaaggatgcaggccaatatggtggctatgacacagcaggggcag
gtgcggatgggaattcacatgagccaggcaggaggcatgggtggaggtcaggtgacctcc
caatacccaggtcaacagggccagatgtctacaatgacccagatgcctcctggacccaat
cagatgatgaccaaccccacagcccagggacgcaaccctgcagccatggccggcatgact
ggcgcacgaagcccagcggcaatggcccaaatgagtgggccaggacaccccatgagccct
gccaacagagggcagatgggcggtgccagtccagtcaacatgggccagatgagtggtcct
ggacaggcaccaagtccagccaacatgggaagcatgacccacccaaggtcccctgccacc
atggggcagatgcatccacgcagcccagctaccatgggtcagggaggcccagccagacca
ttgagcaacccgggcatgggtcagggtggcccagcacggcccctcagcaaccctggcatg
ggccagcagcaggggcagcaggcaagccagacagcatcgggagggacaaccatcggaggt
cagacaacgggcagtactccgggacccatgaaccgagggtcacccgggggcatgacccaa
gcctcctccggcatatcctctagtggaagtggactgaaccaaaacccaagtagtttaagc
caaaatcctggtagcatgacccaaaattctaatagtatgaaccagaactctggtagtatt
aaccaaacccctggtggcatgagccagaacagtagtggtatgaaccaaagccaaagtggg
atcaaccaaaactcgagtggtatgaaccagacccctggaggcatgaatcaggccaacagt
ggtcctcctgggagtcggccaaaccagagtccaatgagccaggtacagtcaatccagggt
ccgggtgcaacaggctcccagaccaaccttaccatgaacagagtgaaaggcggcacggca
acggtgaacagcagccagaacacacctcaaacctcagtggccagccagcggccagccaac
gatagtaataacagtgtacggacatcacaaccatccacgcccaacccaccgccacccacc
tcgagtgggaacaccccggccacagactttgaatttgactttggtgactttgcctctttg
ataagtgactaa
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