Eriocheir sinensis (Chinese mitten crab): 127002997
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Entry
127002997 CDS
T08870
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
esn
Eriocheir sinensis (Chinese mitten crab)
Pathway
esn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
esn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127002997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esn03041
]
127002997
03009 Ribosome biogenesis [BR:
esn03009
]
127002997
Enzymes [BR:
esn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127002997
Spliceosome [BR:
esn03041
]
Complex A
U1 snRNP components
U1 related factors
127002997
Complex B
127002997
Ribosome biogenesis [BR:
esn03009
]
Eukaryotic type
Pre-60S particles
Helicases
127002997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
127002997
NCBI-ProteinID:
XP_050725305
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All DBs
Position
24:17825865..17836280
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AA seq
648 aa
AA seq
DB search
MSYRSRRSRSRSRSRSRDRDRRRDRDDWGSRGGGGGGGSWGSGGGGRPSLKGRQPGERLR
KPRWDMTKLTPFEKNFYQPTPTVLSRSPYEIEKYRTDKEITLRGRNIPNPIQYFGDYNFP
DYVMAEIRRQGYEQPTPIQGQGWPISLQGRDFVGIAQTGSGKTLGYILPAIVHINHQPYL
ERGDGPIALILAPTRELAQQILTVAQDYGASSKIRSTCVFGGAPKGPQIRDLERGVEICI
ATPGRLIDFLEAGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATW
PKEVRNLAEDFLKDYIQLNVGSLSLAANHNILQIVDVCQEIEKDTKLRQLLNEMAQEKAN
KTIIFIETKRKVEDVTRGLRSTGWPAMCIHGDKSQQERDWVLSEFRSGRAPILVATDVAA
RGLDVDDVKFVINYDYPSCSEDYVHRIGRTGRSDKTGTAYTFFTADNCKQAKDLIEVLKE
ANQVVNPRLYEIMDMARGGGGKGRNRWRGRDDDRRGGFGRDRDRGRMGSSSGAGSGSRNG
YSNGNGYGTSQGLGRDNQFRGGGNSIAVPNGVGAGQARLNGPPPLMGSGSLKATMSQGTS
QGHLNGPQRPPVQNVAMGIFNQASSVAGTVGGLGMMGAMPGALTWPRQ
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacagaagtcgcaggtctcggtcccgttctcgttctcgttcccgtgatcgcgat
cgccgtcgtgacagggatgattggggctcacgaggaggaggaggaggtggtggtagctgg
ggatccggcgggggagggcggccgtcactgaagggaagacagcccggcgagcgcctacgc
aagccgagatgggacatgaccaagctcacccctttcgagaagaacttctaccagcccaca
cccaccgtactcagccgctctccttacgagatagagaaatacagaaccgacaaggagatt
acccttcgaggaagaaatatccccaaccccatccagtattttggcgactacaatttccca
gactatgtgatggccgagatccgtagacaggggtatgagcagcccacacccatccagggg
cagggctggcccatctctctccaagggagggactttgtaggcattgcacagactggctca
ggtaagactttgggctacattctgcctgccattgtacacatcaaccaccaaccgtaccta
gagcgtggggacggccccatcgccctgatcctggcccccaccagggagctggcacagcag
atcctgacagtggcccaggactacggtgcctcgtcaaagatccgctccacctgtgtgttt
ggaggagcacccaagggaccacagatccgtgaccttgaaagaggggttgagatctgtata
gccacgcccggtcgtcttattgacttcctcgaggctggcaagaccaacctccgccgcacc
acgtacctggtgctggatgaggccgaccgcatgttggacatgggtttcgagcctcagatt
aggaaaattgttgatcaaatcagacccgacagacagaccctcatgtggtccgccacatgg
cccaaggaggtgagaaatctcgctgaagacttcctcaaggactacatccagctcaacgtg
ggctccctctctcttgctgctaaccacaacattcttcagattgttgatgtgtgccaagag
atagagaaggacacaaagctgcgtcagttgctcaatgagatggcgcaggagaaggctaac
aagactataatctttatcgaaacgaagaggaaggtggaggatgttactcggggtttgagg
agtactgggtggcctgctatgtgtatccatggtgataaatctcagcaagagagagactgg
gtcttaagtgagttccggtctgggagggccccaattctggtggccacagatgtagcggct
cgcggcttagatgtggatgatgtgaagtttgtcatcaactacgactacccgtcttgctct
gaggactatgtccaccgcattggtcgaactgggcggtcagacaagactggcactgcgtat
accttcttcacggctgataactgcaagcaagccaaggatctgatcgaggtgctgaaggag
gcgaaccaagtagtgaatccacgactctacgagatcatggacatggcccgtggtgggggt
ggcaaaggccgcaatcgctggaggggacgtgatgacgacaggaggggaggattcggacgc
gatcgtgatcgcggccgcatgggtagtagtagtggggcaggtagtggttcaaggaacggc
tacagcaatggaaatggatatggtacgtcacaagggcttggaagagataaccagtttaga
ggcggaggcaacagcattgctgtgcccaatggggtgggtgcaggccaggctcggctcaac
gggccaccaccactcatgggttctgggtcattgaaagccactatgagccaaggaacttcc
cagggccatttaaatggcccccaacgtccacccgtccagaatgtggccatgggcatattc
aaccaggcttcctccgtagctggtactgttggtggcctaggcatgatgggggccatgcct
ggtgcactgacctggccgcggcagtga
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