Eriocheir sinensis (Chinese mitten crab): 127005179
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Entry
127005179 CDS
T08870
Name
(RefSeq) transportin-1-like isoform X1
KO
K18752
transportin-1
Organism
esn
Eriocheir sinensis (Chinese mitten crab)
Pathway
esn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
esn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127005179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esn03019
]
127005179
03009 Ribosome biogenesis [BR:
esn03009
]
127005179
Messenger RNA biogenesis [BR:
esn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
127005179
Ribosome biogenesis [BR:
esn03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
127005179
Pre-60S particles
127005179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
HEAT_2
TOR1L1_N
Cnd1
TPR_IMB1
Vac14_Fab1_bd
Arm
TPR_IPO5
HEAT_MROH2B_C
IBN_N
HEAT_EF3_N
TPR_DNAAF5
HEAT_GCN1_C
PDS5
MMS19_C
Adaptin_N
TPR_TTI1_N
Ltn1_1st
TPR_TTI1_C
HEAT_GCN1_C_2
SCD
VPS15-like_hel
UNC45-central
RTP1_C1
HEAT_MROH2B_1st
Proteasom_PSMB
Motif
Other DBs
NCBI-GeneID:
127005179
NCBI-ProteinID:
XP_050729810
LinkDB
All DBs
Position
29:complement(16521478..16566631)
Genome browser
AA seq
893 aa
AA seq
DB search
MGWNPDTDALAQILGLLRESQSPNTVVQQSVQQKLEELNKFTDFNKYLIFVLTKLTSEDE
PTRSLSGLILKNNVKAHFHQFPPDVAQFIKAECLSAVGDPSPLIRATVGILITTTASKGE
LSTWPELLPRLCDMLDSADYNVCEGAFGALQKICEDSAEFLEKSADRPLDTLIPKFLQFF
KHSSSKIRSHAIACVNQFIISKTQALMANIDAFLQNLFHLAMDDDPDVRKNVCRALVMLL
DAHISSLIPHMHNIIEYMMIRTQDPDENVALEACEFWLSLAEHPICKEALKPHLPKLIPI
LVRGMKYSEIDIILLKGDVEEDESVPDRSEDIKPRFHKSRHTIRHEPMENGGSGGEEFAD
DESDDGLDDDSSLSDWNLRKCSAAALDVLANVFREDMLPVILPILKETLFHQEWEIRESG
ILALGAIAEGCMNGMTQHLPELIPYLISCLQDKKALVRSITCWTLSRYCHWAVVLPDHTY
LKPLMYELLKCVLDSNKRVQEAACSAFATLEEEACTELVPYLADILKTLVFAFKKYQAKN
LLILYDAIGTLADSVGNYLNKEEYIQMLMPPLIEKWNVLKDEDKDLFPLLECLSSVATAL
QSGFLPYCGPVYQRCVSLVEQTLNQTMAHAQNPGQFEAADKDFMIVSLDLLSGLAEGLNG
HVGQLVQQSNIMQLLYQAMQDPMPEVRQSSFALLGDLTKACFQYVAPCISEFMPILGQNL
NPELISVCNNATWAIGEISVKLGPEMRVYINLVLNDLIFIINKPNTPKTLLENTAITIGR
LGYVCPNEVAPLLQQFIRQWCISLRNIRDNEEKDSAFRGVCNMISVNPGGVVEDFIFFCD
AIASWINPKQDLKEMFHKILHCFKEQVGEDNWKRFTEQFPPPLKERLSQHYGV
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggggtggaatcctgacacagacgctttagcacagattttaggattactacgcgagtcg
caatctccgaacactgtcgtgcaacaatccgtgcagcagaaactagaagagctcaacaaa
ttcacagacttcaacaaatacctaatatttgtcctcacaaagctaacttccgaagatgaa
cctacgaggtccctgagtggactgatcctcaagaataatgtgaaggcgcatttccaccaa
tttccgccagatgtcgcccagttcatcaaggcggaatgtctctcagctgtgggggacccg
tcgccgctcatccgggcgacggtgggcatcctcatcaccaccacagcctccaagggggag
ctctccacctggccggagctgctgcccaggctgtgcgacatgctggactcggctgactac
aatgtgtgcgagggagcctttggagctctgcaaaagatctgtgaggacagcgccgagttc
ctggagaagtctgcagacagacccctcgacacgctcatcccaaagtttctgcagttcttc
aaacacagctcatccaaaattaggtctcatgccatcgcctgcgtcaaccagttcatcatt
tccaaaacccaggccctcatggcgaacattgacgcgttcctgcagaacctcttccacctg
gcaatggatgacgaccctgatgtgcgcaagaacgtgtgccgggcgctggtgatgctgctg
gatgcgcacatctcctcgctcattcctcacatgcacaacatcatcgagtacatgatgatt
cgtacacaggatccagatgaaaatgtggccctggaggcatgtgagttctggctgtcactg
gctgagcaccccatctgcaaggaggcactcaagccacacctgccaaagctcatccccatc
ctggttcgtggaatgaagtactctgagattgacatcatactactcaagggtgacgtggag
gaggatgagagtgtaccagaccgcagtgaggacatcaagcctcgtttccacaagtcccgc
cacaccatccgccatgagcccatggagaatggtggcagcggcggggaagagtttgctgat
gacgagtcagatgacggactggacgacgactcttctctctctgactggaatctacggaag
tgctcagcggcggccctggatgtattagccaacgtgttcagggaggatatgctgccagtg
atcctgcctatactgaaggagacgctcttccatcaagagtgggaaatcagggagtcaggc
atcctggctctgggcgccatcgcggagggttgcatgaacggcatgacgcagcacctgccc
gagctcatcccctacctgatcagctgtctgcaagacaagaaagctcttgtccgctccatc
acctgttggacgctttctcggtactgtcattgggcggtggtgctgcccgaccacacttac
ctcaagccgctcatgtatgagctgctgaagtgtgtgttggacagcaacaagcgtgtgcag
gaagcagcctgctcagccttcgccaccctagaggaggaagcgtgcacggagctggtacct
tacctggcagatatcctcaagacactggtgtttgccttcaaaaagtaccaggccaagaac
cttctgatcttgtatgatgcgattgggaccctggcagactcagtgggcaactacctgaac
aaggaggagtacattcagatgctgatgccaccgctcattgagaagtggaacgttcttaag
gatgaagacaaggacctcttccccctgctggagtgtttgtccagtgtagcgacggctctg
cagtctggcttcctgccgtactgtggccccgtgtaccagcggtgtgtgtccttggtggag
cagaccctcaaccagactatggcacatgctcagaacccaggccagtttgaggcggctgac
aaagacttcatgatcgtttcccttgaccttctgtccgggctggctgagggactaaacgga
catgtgggccaactcgtgcagcagtccaacatcatgcagctcctctaccaggccatgcag
gaccccatgccagaggttagacaaagctcgtttgctctgctgggtgacctgaccaaagca
tgcttccagtatgtggctccatgtatatctgagtttatgccgatacttggccagaacctc
aacccagaactcatatcagtctgcaacaatgctacctgggccattggggagatatcagtc
aagcttggcccagagatgagggtgtacatcaacttggtgcttaatgacctcatcttcatt
atcaacaagcccaacacacccaagacattgcttgagaacacagccataacaattggacgc
ctaggctatgtgtgtcccaatgaagtggctcccctcttgcaacagtttatcaggcagtgg
tgcatctcactgcgcaacatacgtgacaacgaagagaaggactcggcgttccgtggggtc
tgcaacatgatcagtgtgaaccccggtggagtggtggaggacttcatcttcttctgtgat
gccattgcctcctggatcaaccccaagcaggacctgaaggagatgttccacaagatttta
cactgcttcaaggagcaggtgggcgaggacaattggaaacgcttcaccgagcagtttcct
cctcccctcaaggaacgtttgtctcagcactatggagtgtga
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