Eriocheir sinensis (Chinese mitten crab): 127007296
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Entry
127007296 CDS
T08870
Name
(RefSeq) chromatin assembly factor 1 p55 subunit isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
esn
Eriocheir sinensis (Chinese mitten crab)
Pathway
esn03082
ATP-dependent chromatin remodeling
esn03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
esn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127007296
03083 Polycomb repressive complex
127007296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
esn03036
]
127007296
Chromosome and associated proteins [BR:
esn03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
127007296
Histone modification proteins
HAT complexes
HATB complex
127007296
HDAC complexes
Sin3A-HDAC complex
127007296
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
127007296
PRC2.2
127007296
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
127007296
Heterochromatin formation proteins
Other heterochromatin formation proteins
127007296
Chromatin remodeling factors
NuRD complex
127007296
NuRF complex
127007296
NuRF complex (fruit fly)
127007296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_DCAF12
ANAPC4_WD40
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
127007296
NCBI-ProteinID:
XP_050734034
LinkDB
All DBs
Position
35:complement(4647295..4660356)
Genome browser
AA seq
459 aa
AA seq
DB search
MTDKEGAKGKFGDGGGGPAPDLPPTLALAEVAPAHRLQDTFDDAVEERVINEEYKIWKKN
TPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSDEQNHLLIASVQLP
NEDAQFDASHYDNEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSS
DVLVFDYTKHPSKPDPSGECHPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDI
NATPKENRVIDAKTIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRANNTNKPSH
TVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEVFQVQWSP
HNETILASSGTDRRLHVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEP
WVICSVSEDNIMQVWQMAENIYNDEEPETPASELESGAS
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgacggacaaggagggcgccaaaggtaaatttggggatggtggtggtgggcctgcacca
gacctcccgccgacactggccttggctgaagtggcacctgcacaccgccttcaagacaca
tttgatgatgcggtggaggagcgtgtcatcaatgaggaatacaaaatatggaagaagaac
actcccttcctctacgacctggtgatgacacacgccctggaatggccctccctcactgca
cagtggcttcctgatgtcacaagacctgaggggaaggattacagcatccaccgcctcatc
ctgggcacccacaccagcgatgagcagaaccacctcctcatcgcctctgtccagctgccc
aatgaagatgctcaatttgatgcatcccactatgataacgagaaaggagagtttggtggc
tttggctctgttagtggcaagattgagatcgagataaagatcaaccatgagggtgaagtg
aatcgtgcccggtacatgccccagaacccatgtgtcattgccaccaagactccctccagt
gatgtgttggtctttgactacaccaaacacccctccaagccggacccatcgggagagtgt
cacccagacctgaggctgcggggccaccagaaggaggggtatgggctctcctggaaccca
aacctgaatgggtacttgttgagtgcatcagatgatcacacaatatgtttgtgggacatt
aatgccacacccaaggagaatagagtcattgatgccaagaccatctttactggacacact
gctgtggtcgaggatgttgcttggcacttgttgcatgaatctctgtttggctcagtggct
gacgaccagaagctgatgatctgggacacccgagccaacaacaccaacaaaccctcacac
acggtggacgcacacacagccgaggtcaactgtctctctttcaacccctattcagagttc
atcctggccaccggcagtgcagacaagacagttgccttgtgggacctgcgcaatctcaag
ctgaaactccactcgtttgagtcgcacaaagatgaagtattccaggtgcagtggtcccct
cacaatgagaccatcttggccagctccggcactgaccgccggttacacgtgtgggaccta
agcaagattggagaggaacagagtgctgaggatgctgaagatggacctcctgagctgttg
tttatccatggcggccacactgccaagatctcagacttctcctggaaccccaatgaacca
tgggtcatttgttctgttagtgaagacaacattatgcaggtgtggcagatggcagagaac
atatacaacgatgaggagccggagacaccagcgtcagagctggagtctggtgcctcgtaa
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