Eriocheir sinensis (Chinese mitten crab): 127008580
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Entry
127008580 CDS
T08870
Name
(RefSeq) ATP-dependent RNA helicase Ddx1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
esn
Eriocheir sinensis (Chinese mitten crab)
Brite
KEGG Orthology (KO) [BR:
esn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esn03041
]
127008580
03016 Transfer RNA biogenesis [BR:
esn03016
]
127008580
Enzymes [BR:
esn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127008580
Spliceosome [BR:
esn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
127008580
Transfer RNA biogenesis [BR:
esn03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
127008580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
Motif
Other DBs
NCBI-GeneID:
127008580
NCBI-ProteinID:
XP_050736749
LinkDB
All DBs
Position
38:complement(6176989..6189683)
Genome browser
AA seq
736 aa
AA seq
DB search
MAAFEEMGVMPEIAKAVEEMDWTLPTDVQNEAIPLILGGGDVLMAAETGSGKTGAFCLPI
LQIVWESLKDIQQGKTSKVTKEVSPLWLMSFFDRDPGMAVTPDGLRCQSRDPKAWQGARC
TKGVTGKGKYFFEAMVSDEGLCRVGWSTPQAALDLGTCKNGFGFGGTGKKSNCKQFDEYG
EAFGLNDTIGCYLDLDAMEMSYSKNGVELGKAFTLRSEFKNAVFHPSVVLKNAEITFNFG
QKDFKHPPSNGYIAVCDASKECTVHGGIKASSDKPQKVQNNAPQAIIIEPSRELAEQTLK
QVQLFRQHLDDPVVRDLLVVGGIPVKDQIAALNSGIDIVCGTPGRMEELINTGQLSLQSC
KFFVLDEADGLLKQGHERLINSIYGSIPKITPDGKRLQMVVCSATLHSFEVKRMAERLMH
FPTWVDLKGEDAVPETVHHVVVTIDPRTDTSWTTLRRHVQTDGVHAKDNVRPGNNTPETL
SEAVKMLKGELCVKAIDTHNMDKALIFCRTKLDCDNMERYFNQIGGGAHNRGNPYSCVCL
HGDRKPNERKANLQTFKDGNVKFLICTDVAARGIDVSGLPFIINVTLPDEKSNYVHRIGR
VGRAERMGLAISLVAAVPEKVWYHGEWCASRGRNCYNTRLTTERGCCTWYNEPQYLADIE
EHLGVTIQQVDKEMRVPVDEFDGKVTYGEKRGHTGSSYQTHVEQLAPAVQELAKLEKETQ
NIYLKRQYGKVYPWTR
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggcagccttcgaggaaatgggcgtcatgcccgagattgcaaaagcagttgaagagatg
gattggacgttacccacggatgtgcagaacgaggccattccacttatccttggtggagga
gacgtgctgatggcggccgagacaggcagtggcaagacaggtgcattctgtctgcccatc
ctgcagatcgtgtgggagtcacttaaggacatccagcagggcaagacttccaaggtcacc
aaggaagtgtctcctctgtggctgatgagcttctttgaccgagaccctggcatggctgta
acacccgacggtctgcgctgccagtccagggacccaaaggcctggcagggtgcccgctgc
accaagggcgtcactggcaagggcaagtacttcttcgaggccatggtgtctgatgaaggg
ctgtgcagagtgggctggtccacgccacaggcagccttggatctgggaacatgcaagaat
ggctttgggttcggaggcactggaaagaaatcaaattgcaagcagtttgatgaatacggt
gaggcttttggcctgaacgatacgataggctgctacctggacctggacgccatggagatg
agttacagcaagaacggcgtggagctgggcaaggccttcaccctccgcagcgagttcaag
aatgctgtgttccacccgtcggttgtgctgaagaatgcagagataaccttcaactttggc
cagaaggacttcaaacacccacccagtaatggctacatagcggtgtgtgatgccagcaaa
gaatgtacagtgcatggcgggataaaggccagcagtgacaagccccagaaggtccagaac
aatgcccctcaagccatcattatagagccatcccgagaactggctgagcagacgctgaag
caggtccagctgttccgccagcacctggacgaccccgtggtgagggacttgctggtggtg
ggtggcatccccgtcaaggatcagattgccgccctcaactctggcatcgacattgtgtgt
ggtacccccggacgcatggaggagctcatcaacacaggacagctctccctccagtcctgt
aaattctttgttctggacgaggctgatggacttctaaagcagggtcatgagaggttgatc
aacagcatctacggttccatccccaagatcacgcccgacggcaagaggttacagatggtg
gtttgttccgccactctccactcgttcgaggtgaagcggatggcggagcgtctgatgcac
ttccccacgtgggttgatctgaaaggggaggacgcagtacccgagacagtgcaccatgtg
gttgttacgattgaccctcgcacggacaccagctggaccacccttcgccgccatgtgcag
accgatggagtgcatgccaaggacaatgtgcgccctgggaataatacccccgagacgctg
agtgaggcagtgaagatgttgaagggggagctgtgcgtgaaggccattgacacccacaac
atggacaaggctctgatcttctgccgtaccaaactggactgcgacaacatggagcgctat
ttcaaccagataggcggtggggcacacaaccgaggcaacccctactcctgcgtgtgtctg
catggcgaccgcaagccaaacgagcgcaaggcaaacctccagaccttcaaggatggcaac
gtcaagttcctcatctgcacagacgttgctgctcgtggcatagatgtgtcaggtctgcct
ttcatcatcaacgtgacgctgccggacgagaagagcaactatgtccaccgtattgggcgt
gtgggccgagcggaaaggatgggtctggcgatctccctggtggcggccgtcccagagaag
gtgtggtatcacggtgagtggtgtgccagtcggggccgtaactgctacaacacgcgcctt
accaccgagcgaggctgctgcacctggtataacgaacctcagtacttggcggacattgag
gagcacctgggcgtgacaatccagcaggtagacaaggagatgagggtgccagtggacgag
tttgatggcaaggtcacttatggagagaagcgaggccacacaggttctagctaccagacc
catgtggagcagctggcaccagctgtgcaagagttggctaagctagaaaaggagactcaa
aatatttaccttaagcgccagtacggcaaagtttatccctggacacgataa
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