Eriocheir sinensis (Chinese mitten crab): 127008874
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Entry
127008874 CDS
T08870
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
esn
Eriocheir sinensis (Chinese mitten crab)
Pathway
esn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
esn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127008874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esn03041
]
127008874
Spliceosome [BR:
esn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
127008874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WDR55
EIF3I
PRP4
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_WDR41
Ge1_WD40
eIF2A
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_SPT8
Nbas_N
Beta-prop_DCAF12
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
127008874
NCBI-ProteinID:
XP_050737266
LinkDB
All DBs
Position
39:complement(3572472..3575453)
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AA seq
514 aa
AA seq
DB search
MSDGEESPVPLSGGNSGGGGGSGERQWYAPMETSTAENDSQPASPGSPAPTSNIHTSNEY
MELDEPEMLDEKKALLEEFERKRRARMIHVTTDDSEVKQQLRQLGEPICLFGEGPADRRN
RLKELLSRLGEDALKKTAPGQQERETAEHDQQRPEETWYHEGPQSLKDSRTFLVNYSISR
ARARLKKERLEYQVPEATRTAKRQEVQNKLRSFGLLGSQNADTRPISYCSFSPNGKLLVT
SSWSGLVKVWQVPQCIEERTLSGHNCYVDCVEWHPSATVSMEPTALNLVSSGRDGSVQLW
SLSGEEPLGELPSLDSRVSRVGFHPSGKFLGCCVHDNSWRLWDLEVQEEVLFQEGHSKPV
YCIGFQNDGSLAATGGMDSYGRVWDLRTGRCVMFLSGHQNPVLAVDWSPDGYHVVTGSED
NSAKIWDVRQRRCTYTIPAHTGIVTGVRYDCSGGQYIVTCSYDGSVRLWCHGSFQAMRAL
EGHGQKVMGVSISPVDGIIATCSFDRTFKIWGPD
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatggtgaagaatcccctgttcccctgagtggaggcaacagtgggggtggcggt
gggagtggagagcggcagtggtatgcccccatggagacgtccacggctgagaatgactct
cagccagcctcgccgggaagccctgcgcccacgagcaacattcacaccagcaatgaatac
atggagctggatgagccagaaatgttggatgagaagaaggcactgctggaagaatttgag
agaaagcgacgagccaggatgatacatgttacaacagatgacagtgaggttaaacaacag
ctaaggcagttaggcgagcctatctgtttgtttggcgagggccctgctgatcgaagaaac
aggctgaaggagttactgtcacgcctaggtgaggatgccttgaagaagaccgcacctggg
cagcaggagagggagacagcagagcatgaccaacaacgtccagaagaaacttggtatcac
gaggggccacaatcactgaaggattcacgaacgtttctcgtcaactactccatatcccgc
gccagggccaggctcaagaaggagcgccttgaataccaggttccagaagcgacacgcact
gccaagagacaagaagttcaaaataaactaaggtcttttggtctcctgggaagtcagaat
gctgacacgagacctatctcttattgtagcttcagtccaaatgggaaactcttagtgacg
agttcctggagtggacttgtcaaggtatggcaagtcccacagtgtatcgaggagcgtaca
ctgagtgggcacaattgctatgttgattgtgttgaatggcatccgagtgcaacagtttcc
atggaaccaactgctctgaatttagtttcgagtggacgtgatggaagtgttcagttgtgg
agcttaagtggagaggaaccacttggtgaattgccatctcttgactcacgggtttcacga
gtaggttttcatccaagtgggaagtttctcggttgttgtgtccatgacaatagctggaga
ctgtgggacttggaggttcaagaagaggtgttatttcaagaaggccattctaaaccagtt
tattgcataggatttcagaatgatggatcattagcagccacaggtggcatggattcctat
ggtcgtgtttgggacctgcgaactggacgatgtgtaatgtttctctcggggcatcagaat
cccgtcctagccgttgactggtccccagatggttaccatgtagtgactggaagtgaggac
aattctgctaagatatgggatgtgagacagcgccggtgcacatacactattcctgcacac
actggtattgttactggtgttaggtatgactgctcagggggtcagtatattgtcacatgc
tcctatgatggctcagtccgcctgtggtgtcatggctccttccaggcgatgcgtgcactt
gaagggcatggacagaaggtgatgggggtcagtatttcaccggttgatggcattattgct
acctgttcctttgatcgcacttttaagatatggggccctgattaa
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