Eriocheir sinensis (Chinese mitten crab): 127009466
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Entry
127009466 CDS
T08870
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-A-like isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
esn
Eriocheir sinensis (Chinese mitten crab)
Pathway
esn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127009466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esn03019
]
127009466
Messenger RNA biogenesis [BR:
esn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127009466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_14
TPR_19
ANAPC3
TPR_10
TPR_12
TPR_8
TPR_17
TPR_1
SR-25
ANAPC8
IMUP
KIAA1549
FAM199X
DUF4692
Motif
Other DBs
NCBI-GeneID:
127009466
NCBI-ProteinID:
XP_050738553
LinkDB
All DBs
Position
1:3385738..3402119
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AA seq
726 aa
AA seq
DB search
MAESKSGAEEGPESPTTTETTNNSDATDTEREWAQAAQAQFTKGNHVAALTLLSYLQGTR
PKDPKVLMNKAVVEYYKSDLKKTDAFRKQLADICVHCGIKMDEVGTGDEVERSVIRFNHC
VVLYHLHQYRAALALLEKMYTGLESLEESVGIGVCLLMAECHLGTHHPERALTIITHTET
TFLPQPLPHTPSHKQPPPQEKENNQLYFRSPEKISVSGGTGSSSSSSSSSSSSSSSSSTA
STAADEIRCSATQEQLRGKLQQLRVRAQLMMRALKVAKKELKMIVTHAVAGNSLNVTLIS
LKSQLEYLKGNYRKAIKVLNQCAAIPPPSPSYGPSLGVMYYNNLGVIHLGMGKPTVACLY
LQKALQETQVKEESNSSGNSEEVLSQQPLYQLSSNVQPELYYNLGVTLLHMNKPDKAFDF
LLEVLQVHPMNPRLWLRLAECCILVHKLGLKEDLSSKRNIIQGTVGVGVHRKICLATRIT
DHNKKKSDLHPESDAAFPEPTLEFARLCLRNTLILLPENVSTTSLTDEQEVSGVMPELYP
AGPSSPLRGAEVLRLRVSALACSAYVGLCLSDFSTVLRHAEQLLVAHPKMPGVYKLLGHL
YASEALISLGKVTEAIQHLDPRVVGDVSLSPQAQEASDAPQAMMSSQGWLNTTTTTTAMQ
VMRYNLSVAYALRGEWEKANNLLKEVWVETNGNMPAQFIMLAMYINLQMGHVDIMKNIVK
KNILLT
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcagagagcaagagtggggcagaggagggcccggagtctcccaccaccacggagacg
accaacaactcggatgcaacggacacggagcgggagtgggcgcaggccgcccaggcgcag
ttcaccaaggggaaccatgtggccgccctcacgctgctgtcctatctccaggggacgagg
cccaaggatcctaaagtcctgatgaacaaggctgtggtggagtactacaaaagtgacctg
aagaagaccgatgcctttagaaagcagctggccgacatatgtgtgcattgtgggatcaag
atggacgaggtcggcaccggggatgaggtggagcgcagtgtcatccgcttcaaccactgc
gtcgtgctctaccacctccaccagtaccgtgccgccctcgccctcctggagaagatgtac
accggccttgagtctctcgaggagagtgtaggcataggtgtgtgtctcctgatggctgag
tgtcacctgggcacacaccatcccgagcgagccctcaccatcatcacccacacggagacc
accttcctgcctcagccgctgccccacacgccctcacacaagcagccgccaccacaggaa
aaggaaaacaatcaactttatttcaggtccccagaaaaaatcagtgtttctggaggcact
gggagcagcagcagcagcagcagcagtagcagtagtagcagcagcagcagtagtacggca
agcacagcggctgatgagatccggtgcagcgccacacaggagcagctgcgagggaagctt
cagcagttgcgggtgcgggcgcagctgatgatgagggcgctgaaggtggccaagaaggag
ctcaagatgatagtgacgcacgctgtcgcaggcaactccttgaacgtgactttgataagc
ctgaagagtcagctcgaatacctcaaaggcaactaccggaaagccatcaaagtgcttaac
cagtgtgcagcaatacctccccctagtccgtcgtatggtcctagtcttggtgtgatgtac
tataataacctgggcgtcattcacctgggcatgggcaagcctaccgtggcttgtctctac
cttcagaaggccctccaggaaactcaggttaaagaggaatcaaattcctcgggtaattca
gaggaggtgttgtcgcagcagcccctgtaccagctgagcagcaacgtgcagccggagctg
tactacaacctgggcgtgacgctgctgcacatgaacaagcccgacaaggccttcgacttc
ctgctggaggtgctgcaggtacatcccatgaacccccggctgtggctgaggctggcggag
tgctgcatcctcgtacacaagctgggcctgaaggaagacctcagctccaagaggaacatc
atccagggaacagtaggagtcggggtgcatcgcaagatctgcctcgccacgcgcatcaca
gatcacaacaagaaaaagagtgacctgcacccagagtcagacgcggccttccctgaaccc
accttggagttcgcccggctgtgcctccgcaacaccctcatcctcctgccagagaatgtg
tccaccacctccctcacagacgagcaggaagtctcaggggtgatgccagagctttacccc
gccgggccgtcctctcccctgcgtggtgctgaggtgctgcgtctgagggtttcggcactg
gcctgcagcgcctacgtgggcctctgcctctcggacttctccacggtgctgaggcatgcg
gagcagctgctggtggctcatccaaagatgcctggagtatacaaactgctgggccacctc
tacgccagcgaggccctcatctccctgggcaaggtgacggaggccatacagcacttggac
ccacgtgtggtaggggacgtctccctctcccctcaggcacaggaggcctcggatgccccc
caggccatgatgtcctcccaaggctggctcaacaccaccaccaccaccacggccatgcag
gtgatgcggtacaacctgagtgttgcgtacgccctgcgcggggagtgggagaaggcgaac
aacctgctgaaggaggtttgggtggagaccaatgggaacatgccggctcagtttatcatg
ttagccatgtatatcaacctgcagatgggtcacgttgatatcatgaagaacattgtcaag
aagaacattctgcttacatga
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