Eriocheir sinensis (Chinese mitten crab): 127009937
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Entry
127009937 CDS
T08870
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
esn
Eriocheir sinensis (Chinese mitten crab)
Pathway
esn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
esn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127009937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esn03019
]
127009937
03041 Spliceosome [BR:
esn03041
]
127009937
Messenger RNA biogenesis [BR:
esn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
127009937
Spliceosome [BR:
esn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
127009937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
VID27
Motif
Other DBs
NCBI-GeneID:
127009937
NCBI-ProteinID:
XP_050739431
LinkDB
All DBs
Position
42:complement(8947288..8958271)
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AA seq
343 aa
AA seq
DB search
MVSATLRNLYWTSFSQAASLEAGLLAVGNNEGKISVFDLSSVCNSRESGIGERLRSPCKV
ISAHSDAVYAMVATEGFCVSGTTGQISGRRWEELKQGQMPPAWSLSLECDQANFGTPEVN
SLAHDPQRGLLYAACGDWRTHVYDIETGKRTHTLEGHEDYVHQVVVGAGGGSGGPLVASS
GEDGQVLVWDPRVGREPRHRLSPHTHSELARPSIGKFVATLDVTGDWLVCGGGPRAGIFH
LKSLALTTVLPPTSPTIHVTKFTRHAEGGDRGGIVVAGIAPQLTVCSMAGMVTAQLPCSS
PCIYTVNVSDKPFTMMTYGGTSTKLDVCFNLNYRDHTVSLVDD
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggtttcggcgaccctgaggaacctgtactggacgtcgttcagccaagcggcgtccctg
gaggcggggctgctggcggtgggcaacaatgaggggaaaatatccgtcttcgacctgtcc
agtgtgtgcaacagccgggagagtggcattggcgagcgtctgaggagcccgtgtaaggtg
atcagtgcacacagcgatgccgtgtatgccatggtggccacggagggcttctgtgtgtcg
ggaaccaccggccagatcagtggccgtcgctgggaggagctgaagcagggccagatgccg
cccgcctggagcctgtccttggagtgtgaccaggccaactttgggacacctgaagtcaac
agcctcgcccacgacccacagcgaggtctcttgtacgctgcctgtggggactggcgcaca
catgtatacgacattgaaacagggaaacgtacgcacacgctggagggccacgaggattac
gtgcaccaggtggtggtgggtgccgggggaggaagcggcggccccctggtggccagcagc
ggggaggacggacaggtgttggtgtgggacccaagggtggggagggagccccgccaccgc
ctctcccctcacacccactctgagcttgcccgcccctccataggaaagtttgtggccacg
ctggatgtgactggtgactggctggtgtgtggcggggggccccgtgctggcatcttccac
ctcaagtccctggcgctcaccactgtgctgccgcccacctctcccaccatccacgtcacc
aaattcaccaggcacgccgaggggggtgaccgaggaggcattgtggtggccggaatcgcc
ccgcagctaacagtgtgcagcatggcagggatggtgacggctcagctaccctgttcatcg
ccctgcatctatacggtcaatgtgtcagacaagcctttcacgatgatgacctacggaggg
accagtaccaagttggacgtgtgtttcaacctcaactaccgcgaccacacagtctccctc
gtggatgactga
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