Escherichia coli O104 H4 2009EL-2071 (EAEC): O3O_00520
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Entry
O3O_00520 CDS
T02256
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
eso
Escherichia coli O104:H4 2009EL-2071 (EAEC)
Pathway
eso00300
Lysine biosynthesis
eso00470
D-Amino acid metabolism
eso01100
Metabolic pathways
eso01110
Biosynthesis of secondary metabolites
eso01120
Microbial metabolism in diverse environments
eso01230
Biosynthesis of amino acids
Module
eso_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
eso00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
O3O_00520 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
O3O_00520 (dapF)
Enzymes [BR:
eso01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
O3O_00520 (dapF)
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Paralog
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
AFS83897
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Position
complement(5193468..5194292)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE
PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE
SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV
ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctcgaaaatgcatggccttggcaacgattttatggtcgtcgacgcggtaacg
cagaatgtctttttttcaccggagctgattcgtcgcctggctgatcggcacctgggagta
gggtttgaccaactgctggtggttgagccgccgtatgatcctgaactggattttcactat
cgcattttcaatgctgatggcagtgaagtggcgcagtgcggcaatggtgcgcgctgcttt
gcccgttttgtgcgtctgaaagggctgaccaataagcgcgatatccgcgtcagcaccgcc
aacgggcggatggttctgaccgtcaccgatgatgatctggtccgcgtaaatatgggcgaa
cccaacttcgaaccttccgccgtgccgtttcgcgctaacaaagcggaaaagacctatatt
atgcgcgccgccgagcagacaatcttatgcggcgtggtgtcgatgggaaatccgcattgc
gtgattcaggtcgatgatgtcgataccgcggcggtagaaacgcttggtcctgttctggaa
agccacgagcgttttccggagcgagccaatatcggttttatgcaagtggttaagcgcgag
catattcgtttacgcgtttatgagcgtggggcaggagaaacccaggcctgcggcagcggc
gcatgtgcggcggtggcggtagggatccagcaaggtttgctggccgaagaagtacgcgtg
gaactccccggcggtcgtcttgatatcgcctggaaaggtccgggtcacccgttatatatg
actggcccggcggtacatgtctacgacggatttattcatctatga
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