KEGG   Escherichia coli O104 H4 2009EL-2071 (EAEC): O3O_13670
Entry
O3O_13670         CDS       T02256                                 
Name
(GenBank) putative ATP-dependent helicase Lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
eso  Escherichia coli O104:H4 2009EL-2071 (EAEC)
Brite
KEGG Orthology (KO) [BR:eso00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:eso03400]
    O3O_13670
Enzymes [BR:eso01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     O3O_13670
    5.6.2.6  RNA 3'-5' helicase
     O3O_13670
DNA repair and recombination proteins [BR:eso03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    O3O_13670
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH4_Lhr WH3_Lhr WH2_Lhr Helicase_C ResIII HTH_20 DDRGK
Other DBs
NCBI-ProteinID: AFS86485
LinkDB
Position
complement(2452602..2457218)
AA seq 1538 aa
MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQSQTWHVAARSEHALVIAPTGSGKTLA
AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQLPLKGIADERRRRG
ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDE
VHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA
MRHPQIRIVVPVANMDDVSSVASSTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN
SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS
KEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQV
GGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMEALQVD
EWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL
LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQI
TRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEEN
TNANIQGLIDEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWALAIAGR
IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF
RECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPA
LERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSEL
LRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRH
TGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRV
SYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEV
FRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVM
RVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALH
LQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRNKIGESVDLSALQE
ALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPN
LAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDS
GRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWP
AHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREP
RLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDWG
NT seq 4617 nt   +upstreamnt  +downstreamnt
atggcagataatccagacccttcatcgctcctgccggacgtgttttcaccggcgacccgc
gactggtttcttcgcgcctttaaacagccgaccgctgtccagtcgcaaacctggcatgtg
gcggcgcgaagcgaacatgcgctggtgattgcaccgaccggctccgggaaaacgctggca
gcatttctctacgccctcgatcggctcttccgcgaaggcggcgaagatacccgcgaggcg
cataagcgtaaaacctcacgcatcctctatatttcaccgataaaagctctgggcaccgac
gttcagcgcaacttgcagctcccgttgaagggtattgccgatgaacggcggcggcgcggc
gaaacggaagtcaatcttcgcgtagggatccgtactggcgatacgcctgcacaggaacgc
agcaaactcacccgtaatccgccggatattctgatcaccacacccgaatcactctatctg
atgctgacctcccgcgcgcgcgaaacgctacgcggcgtcgaaacggtaattattgatgaa
gtccacgcggtagcgggcagtaaacgtggtgcgcatctggcgttaagtctggagcggctc
gatgcgctgctccacacctcagcacagcgaattggcctttctgccactgtgcgctcagcc
agcgatgtggcagcatttcttggtggcgatcgcccggttacggtagtcaacccgcccgca
atgcgccatccgcagatacgaattgtcgtaccggtcgccaatatggatgatgtctcatcg
gtcgccagcagcaccggcgaagacagccatgccggccgggaaggctccatctggccatat
attgaaacgggtatccttgatgaagtgttgcgccatcgctcgaccattgtctttactaat
tcacgtgggctggcggaaaaactgacggcacgattaaatgagctttacgccgcacgctta
cagcgttccccgtctatcgccgttgatgcggcccatttcgagtcgacctccggcgcaacc
tctaaccgtgtacaaagtagcgacgtttttattgcccgctcacaccacggctccgtctct
aaagaacaacgagcaatcaccgagcaggcgctgaaatcgggtgagttacgctgcgtggtc
gcaacctccagtctcgaactggggattgatatgggcgcagtggatctggtgattcaggtg
gcaacgccgctttctgttgccagtgggttacaacgcattggtcgcgccggacatcaggtt
ggcggtgtatctaaagggctgtttttccctcgtacccggcgtgacttagtcgattccgca
gtcattgtagagtgtatgttcgcaggcaggctggaaaacctgacaccgccgcataatcca
ctcgacgtccttgcgcagcaaaccgttgccgccgcggcgatggaggcattacaggtagac
gaatggtactcccgcgtacgccgtgccgcaccgtggaaagatctgccaagacgtgttttt
gacgccacgctggatatgctttccgggcgctatccctctggcgatttttctgcttttcgc
cccaaactggtctggaacagggagaccgggatattgaccgcccgacctggcgctcaattg
ttggcggttaccagcggcggcaccattccggatcgtggcatgtatagcgtgttattaccc
gaaggtgaagaaaaggccggttcgcggcgggtgggtgaactggatgaggagatggtatat
gagtcgcgggtgaacgacattatcactctcggcgctacctcatggcggatccagcaaatc
acccgcgatcaggtgattgtgactcctgctccgggtcgttctgcccggctccccttctgg
cgtggtgaaggtaacggacgtccggctgaattaggcgagatgatcggcgattttcttcat
ttgctggcggatggcgcgttcttttccgggactattcccccgtggctggcagaagaaaat
acgaacgccaatattcaggggttgattgacgagcaacgcaacgcgacgggcatcgttccg
gggagtcgccatctggtcctcgaacggtgccgtgatgaaattggcgactggcgtattatt
ttgcactctccctatggaagacgggtgcatgaaccctgggcgctggcgattgccgggcga
atacatgccctatggggcgctgacgcgtctgtggtcgccagtgatgacggcattgttgcg
cgcattcctgacactgatggtaaattgcccgacgccgcgatttttttgtttgaaccagaa
aagttgctgcaaattgtccgcgaggcggtaggcagctcggcacttttcgccgcccgtttt
cgcgaatgcgccgcgcgggcattattaatgccggggcgcactccgggccatcgcaccccg
ctttggcaacaacggctgcgcgccagtcagttgctggaaatcgctcagggatatccggat
tttccggtcattctcgaaaccctacgcgaatgtctgcaagatgtttatgatcttcccgca
ctggaacgtttgatgcgtcgcctgaacggtggcgaaattcaaatatccgatgtaacgacc
actacgccctcgcctttcgccacaagtttattgttcggctatgtcgcggaatttatgtac
cagagcgacgccccgctggcagagcgccgggcatccgtactgtcgctggacagcgagtta
ctgcgcaatctactcggacaggtcgatccgggggaattactcgacccgcaggtcattcgc
caggtggaagaagagttgcaacgactggctcctggcagaagagcgaaaggtgaagaagga
ttgttcgacctgctgcgcgaactggggccaatgaccgttgaagacctggcgcaacggcat
acaggcagcagtgaagaggttgcgtcgtatctggaaaatcttcttgcagtaaaacgaatc
ttcccagcgatgattagcggacaggagcgtcttgcctgtatggatgatgccgccaggctg
cgtgatgccctcggcgtacgactaccagagtcattgccagagatttatttacatagagtc
agttacccgcttcgcgatctctttctgcgctatctccgggctcatgctctggtcacggct
gaacaactggctcatgagtttagtctcggtattgccattgtcgaagagcagcttcagcaa
ctgcgtgaacagggtctggtgatgaatctgcaacaagacatctgggtgagcgatgaagta
tttcgtcgtctgcgtttgcgctcgctgcaagccgccagagaagcgacgcgtcccgttgca
gccacgacctatgcgcgattgctgctggaacgtcagggcgtattacccgccaccgatggt
agcccggcgctctttgcctcaacatcgccaggcgtttatgagggcgtagatggcgtgatg
cgggtgatcgaacagcttgccggagtcggtttacccgcctcactctgggaaagccagatc
ctgcctgcccgcgtacgcgactattcgtcagaaatgctcgatgaattactggcaaccggt
gcggttatctggtcggggcaaaaaaaactgggtgaagatgacggcctggtggcactgcat
ctacaggaatatgctgcagaatcgttcactcccgccgaagcggatcaggcgaatcgttcg
gcgctgcaacaagcgatagtcgctgttctggctgacggaggagcctggtttgcacaacaa
atcagccaacggatacgcaacaaaatcggcgaatcggttgatctctctgccctgcaagag
gcgttatgggcgctggtctggcaaggcgtcatcaccagcgacatttgggcaccgttacgc
gccctcacccgcagcagttccaacgcacgcacctcaactcgccgcagtcaccgggctcgt
cgtggacgtcctgtctatgcgcaacccgtctcgccgcgggtatcttacaacacaccaaat
ctggctggacgctggtcgttattgcaggtggagccactaaacgataccgaaaggatgctg
gcgctggcggaaaatatgctcgaccgctacggcatcatcagtcgtcaggcggtgatagcc
gaaaatatccctggcgggtttccatcgatgcaaacgctttgtcgaagtatggaagactcc
gggcgaattatgcgaggtcgttttgtagaaggtctgggtggcgcgcaattcgctgaacgt
ctgactattgaccgattgcgcgatctggcgacacaagccacgcaaacgcgccactataca
ccagtggcgctctctgccaacgatccggctaatgtgtggggaaatcttctgccctggcct
gcacatccggcaacgctggttccaacgcgtcgggcgggtgcgctggtggtcgtttctggc
ggcaaattgttactctatctggcgcaaggtggcaaaaaaatgctggtctggcaggaaaaa
gaggaattactcgccccagaggttttccacgcgctgactaccgcactgcgtcgcgaacca
cggctgcgctttacgctaacagaagtgaatgatctaccggtccggcaaacgccgatgttt
acgctgctgcgtgaggcgggattttcaagttcgccacaagggctggattggggatag

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