Escherichia coli O104 H4 2009EL-2071 (EAEC): O3O_16620
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Entry
O3O_16620 CDS
T02256
Name
(GenBank) galactitol utilization operon repressor
KO
K02436
DeoR family transcriptional regulator, galactitol utilization operon repressor
Organism
eso
Escherichia coli O104:H4 2009EL-2071 (EAEC)
Brite
KEGG Orthology (KO) [BR:
eso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eso03000
]
O3O_16620
Transcription factors [BR:
eso03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
O3O_16620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
GntR
HTH_11
CoA_trans
HTH_PafC
CggR_N
HTH_5
DUF977
FeoC
SelB_WH_2nd_bact
MarR
DsrD
Motif
Other DBs
NCBI-ProteinID:
AFS87063
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Position
1880618..1881391
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AA seq
257 aa
AA seq
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MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM
SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAK
NITVITNSLPAAFALSENKDITLVVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADG
IDAVNGITTFNEGYSISGAMVTAANKVIAVLDSSKFNRRGFNQVLPIEKIDIIITDDAVS
EVDKLALQKTRVKLITV
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaattcattcgagcgaaggaataagatcatccaattagtgaatgaacagggaaccgtg
cttgttcaggatctggcgggagtatttgctgcctcggaagcgacaatccgtgccgatttg
cgctttctcgaacaaaaaggcgtggttacgcgctttcatggcggtgcggcgaaaataatg
tccggtaatagtgaaaccgagacccaggaagtcgggtttaaagagcgatttcagctcgcc
agcgcgccaaaaaacagaatagcgcaggcggcagtcaaaatgatccacgaagggatgacc
gttattctcgacagcggaagtacgacgatgcttatcgccgaaggattaatgaccgccaaa
aatatcacggtgattaccaacagtctcccggcagcgtttgccctttccgaaaataaagac
attactctggtcgtctgcggtggcacggtccgccataaaacgcgctcgatgcatggttcc
attgccgagcgttcattgcaggatattaatgccgatttaatgtttgtcggtgctgatggt
attgatgcggttaatggtattacgacctttaatgaaggttattcgattagcggggcgatg
gtcaccgccgctaataaagtgattgccgttctcgattcatcgaaatttaaccgtcgcggt
tttaatcaggtactgccaatcgaaaaaattgacattattattaccgatgatgctgtgtct
gaggtggataaactggcattgcagaagacacgggtaaaattaattacggtgtag
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