Etheostoma spectabile (orangethroat darter): 116669381
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Entry
116669381 CDS
T08457
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein C-like isoform X1
KO
K12884
heterogeneous nuclear ribonucleoprotein C1/C2
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116669381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esp03041
]
116669381
Spliceosome [BR:
esp03041
]
Common components
Common spliceosomal components
hnRNP proteins
116669381
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
UPF0688
Ap4A_phos_N
IL11
Motif
Other DBs
NCBI-GeneID:
116669381
NCBI-ProteinID:
XP_032355083
LinkDB
All DBs
Position
19:7912971..7923548
Genome browser
AA seq
338 aa
AA seq
DB search
MGLLCHWCERMCAFDKRHLFLIITMMSTLSPPISQTGRQTSTNPSTDTDMDPMASNVTNK
TDPRSLNSRVFIGNLNTLLVTKADVEAIFSKYGKVLGCSIHKGYAFVQYANERNARAAVV
SEDGRMIVGQVLDINLAGEPKPHRSKTGKRSAGDMYSSSVDLDYDFQRDYYDRMYSYQPR
VPPPPPPLSRAVIPTKRPRVSLSGGGSRRTKTSFSSSKTSQRTSRAMKVDDLQSIKRELT
QIKHKVDYLLESLECMEKDHSKKSEMKSCQPEPGEVSPLNSSTSSKKDESMKRGLNDSEE
EGDLLDDDDEMKCRQREEEEGEQEEGEDDGDSTNGDES
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgggattgctgtgtcattggtgtgaaagaatgtgtgccttcgacaaaagacacctgttc
ttgataataacaatgatgtcaacattgtcacccccaataagtcagacaggcaggcagacc
tccaccaacccgagcacagacacagacatggaccccatggccagcaacgtgaccaacaag
acggacccccgctccctcaactcccgcgtcttcatcggcaacctcaacaccctgctggtc
accaaggccgatgtggaggccatcttttccaagtacggcaaagtcttgggctgctccatc
cacaagggctacgcctttgtccagtacgccaatgagaggaacgcccgggccgccgtggtc
agtgaggacggccgcatgatcgtgggacaggtgctagacatcaacctggcaggcgagccg
aaacctcacagatcgaagacagggaagcgttccgcaggagacatgtacagttcctctgtt
gatttggactatgactttcaaagagattactatgataggatgtactcctaccagccccgg
gtgcctcctccccctccacctctgtcccgtgctgtcattcccacaaagcgtcccagggtc
agtctgagcggaggagggagccgacgaaccaaaaccagcttctcttcctccaagaccagc
cagaggacctcccgagcgatgaaggtagatgatctgcagtccatcaagagagagctcaca
cagatcaaacacaaggtggactacctgctcgagagcctagagtgcatggaaaaggaccac
agcaagaagtcagaaatgaagagctgccaaccagaaccaggtgaggtgtcccccctcaac
tcctccacctccagcaagaaagatgagagcatgaagcggggcctgaacgactctgaggag
gagggagatctgctggatgacgacgacgagatgaaatgcagacagagagaggaggaggaa
ggcgagcaggaggaaggagaggacgacggagatagcaccaacggagacgagtcctaa
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