Etheostoma spectabile (orangethroat darter): 116669408
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Entry
116669408 CDS
T08457
Symbol
pcdh7
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
116669408 (pcdh7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
esp01009
]
116669408 (pcdh7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
esp04515
]
116669408 (pcdh7)
Protein phosphatases and associated proteins [BR:
esp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116669408 (pcdh7)
Cell adhesion molecules [BR:
esp04515
]
Cadherins
Protocadherins
116669408 (pcdh7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Mid2
TMEM154
LYRIC
Gp80
Adeno_E3_CR2
DUF1180
Motif
Other DBs
NCBI-GeneID:
116669408
NCBI-ProteinID:
XP_032355123
LinkDB
All DBs
Position
19:14438614..14546373
Genome browser
AA seq
1256 aa
AA seq
DB search
MRTTGAVDYLYYSMLILQLVHQPAAKQVLRYRLAEEGPADVRVGNVAGDLGIVAGSGEVT
FTLESGSDFLKIDNITGELATNERRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWVD
LFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQD
NGENSRRLGSSGDSFSGKRRFEEGASRSSVFELQVADTTDGEKQPQLIIKGALDREQRDS
YELTLRVRDGGDPPRSSQAILRVMITDVNDNSPRFEKSVYEADLPENSSPGAPILQLKAA
DADVGVNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREEVSQLRFTVMARDRGQP
PKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGIANVAEDVVVDTPIALVQVSDRDQG
ENGIVTCTVVGDVPFQLKPASEMEGEQNKKKYFLHTSATLDYEATQEYNVVIVAVDSGSP
SLASNNSLIVKVGDTNDNPPIFSQNVVEVSFPESNAPGERVTTVAAIDADSGKNAEIAYS
LDSSVNGIFSIDADSGDIRVNTILDREQTERYEFKVIAKDKGINTLQGSATVVVLVADKN
DNDPKFMQDVFTFYIKENLEPNSPVGMVTVIDADKGHNAEMSLFIEEEEDIFSIENDTGT
IFSSLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLLIMDDNDNAPTVTFPINSSYTLL
PPSSNIRTVVRTVIATDADTGINADLNYSIIGGNPFKLFEIDGGTGVISLVGKLEQKHYG
LHRLVVQVNDKGQPSQSTTTLVHVYVNETLSNSTVVDTQVAKSLSTSLNTNIAGDPNYDL
SKQRLSIVIGVVSGIMTVILIILVVVMARYCRPKNKNGYEAGKKDHEDFFTPQQHDKSKK
PKKDRKKQKSKQPLYSSIVTVEASKPNGQRYDGVNEKLSDSPGMGRYRSVNGGPGSPDLA
RHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGTGDNISLGSDHCSEYSSQTIN
KYNKQPFRRVTFSVVSQPQDPHQQGSLQSCYDSGLDESETPSSKSSSGPRLGALPLPEDS
YERTTPDGSVGEAEHMENDSRPLPDVAMTGKCTRECDEYGHSDSCWMPVRTSPERRPSKS
TTTPQQPKLSTFMSGNGSSGSSSAEQPGSQETLAMAAMANGDPAAAHMMGDRNRNLLNKK
MASSSSSYEAFGSPSFGSPGNGEETLGHPTEEIPLAPTGEYKPTSCGTLTRREVYL
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgaggactactggtgcagtggactatttgtactatagcatgctcatcctgcagcttgtg
catcagcccgctgccaagcaagtgctccggtaccgtttggctgaggagggacccgccgat
gtcagagtagggaacgtagccggcgacctgggcattgttgccgggtccggcgaggtgaca
ttcacgctagagtcaggctctgattttttaaaaatagacaacataacaggtgagctcgcc
accaatgagaggcgcatagaccgtgaaaaattacagcagtgccaaatgatatttgatgaa
aacgagtgttttatagattttgaggtgtcagtgattggaccagcccaaagctgggttgac
ctctttgagggaaaagtaatcatattagatataaatgataacacaccgtctttcccctcg
cctgtcctgacactgtctgtggaggaaaacagacccattggaacgctttatctgctcccc
acagccacagacagagattttggcagaaatggaatagagcgatatgagcttatccaggac
aatggggaaaactcaaggcgcttgggctcttctggggattcattctcggggaagaggaga
tttgaggaaggagcaagcaggagcagcgtctttgaactgcaagttgctgacactactgat
ggagagaagcagcctcaactcatcattaaaggggcccttgacagggaacagagagactcc
tatgagctcacactccgtgttagggatggaggtgatcccccgcgctcctcccaggccatt
cttagggtgatgatcactgatgtgaatgacaacagccctcgatttgagaagagtgtgtat
gaagctgacctaccagaaaacagctcccctggtgcccccatactgcagctcaaagcggct
gatgcagacgtgggggttaatggtcaaatagagtatgtgtttggggcagccacagagtca
gtaaggagactgctgaggttggatgaaagcacagggtggctgagtgtgttgcaccgcatc
gaccgtgaagaagtgagccagcttaggttcacagtaatggcccgtgaccggggccaacca
ccaaaaatggacaaggccactgtggtgttgaacattaaggatgaaaatgacaacgttcct
gctatagagataaggaaaattggacgcattttcttaaaagatggcatagccaacgtggcc
gaggacgtagtggtggacacacccattgccttagttcaggtgtcagaccgtgaccagggg
gaaaacggcattgtgacctgcacagtggtaggggatgttccctttcagctcaaaccagcc
agcgagatggagggtgagcagaataaaaagaaatatttcctccacacgtctgcaacgctg
gactatgaggccacacaggagtacaatgtggtcatagtggctgtggactctggaagcccc
agtctggcaagtaataactctcttatcgtcaaagtgggcgacactaacgacaaccctcct
atcttcagccagaatgtagtagaggtgtcgtttccagaaagcaatgcccctggtgaacgg
gtgacaacagtagcagccatcgatgcagatagtgggaagaatgctgaaatagcctattcc
ctagactcatcagtaaatgggattttctctattgacgcagacagtggagacatccgagta
aacaccattctggatagagagcaaacggagcgctacgaattcaaagtgatagccaaagat
aagggcataaacactctacagggttcagcaacagtggttgtccttgtggcagacaaaaat
gacaatgatccaaagttcatgcaggatgtgttcactttctacattaaagaaaaccttgag
ccaaacagcccagttggcatggtcacagtcattgatgcagataaaggccataatgcagag
atgagtcttttcattgaggaagaggaggacatcttttccattgagaatgacacagggact
attttctccagtctgtcgtttgaccgagagcaaaaaaccacatacacattccgtgtcaag
gctgtggacggtggtgatccacccagatccgccaccgccacagtttcactcttaataatg
gatgataatgacaatgcaccaacagtcactttcccaataaacagctcctacactcttctt
cctccctccagcaacatcagaacagtagtcaggactgtcatagccactgatgccgacact
ggcatcaacgccgacttgaactacagcatcattgggggaaacccctttaagctgtttgag
attgatgggggcactggggtcatttcactggtggggaagttggagcagaagcactatggc
ctccacagactagtggtccaggtaaacgacaagggtcagccttcacagagcaccacgaca
ctagttcacgtgtatgtcaatgagacactttccaattccacagttgtggacacccaggtg
gctaagagtctgagcacgtctctgaacaccaacattgccggggaccccaactatgatcta
agcaaacagcggctaagcatcgtcattggagtagtttctggcatcatgacggttatcctc
attattctagtcgtcgtcatggcccgttactgccgtcccaagaataagaacggctacgag
gccggcaagaaggatcacgaagacttcttcacgccacagcagcatgataagtccaagaag
cccaaaaaagataggaagaaacaaaagtccaaacagccactctatagcagtatcgtcacc
gtagaggcctccaaacccaacgggcagcgctacgatggcgtcaacgagaagctgtcggac
agtcctggcatgggacgctaccggtcagtcaacggaggaccagggagcccagatctggct
cggcactacaagtccagttcaccgctccctactgtccagcttcacccgcagtctccgaca
gctggaaaaaagcaccaggcagttcaggacctgccccctgccaacacctttgttggcacc
ggagataacatttcccttggatctgaccactgctctgaatacagcagtcaaaccatcaac
aagtacaacaaacagccgtttcgccgagtgaccttctcggtggtgagccagccccaggac
cctcaccagcagggatcgctgcagagctgctacgacagtggcctggacgagtcggagaca
cccagcagcaagagttcatcgggtccccggctgggcgcccttcccctccccgaggacagc
tacgagaggacaacgccggatggcagtgtcggtgaggcagagcacatggaaaatgactct
cggcccttgcctgatgtagccatgactggcaagtgcacacgggaatgcgacgagtacggc
cactcggactcctgctggatgcctgtgcgcacgtcgcctgagcgacggccatccaagtca
accaccaccccccaacaaccaaagctttccactttcatgagcggcaacggcagcagcggc
agcagcagcgccgagcagcccggcagccaagagaccctcgccatggccgccatggccaac
ggagaccccgccgccgctcatatgatgggcgaccgcaatcgcaacctgctcaacaagaag
atggcttcctcctcctcctcctacgaggccttcgggtcgccttccttcggctcgccagga
aatggggaggagacgctgggccaccccaccgaggagatccctctggcacctactggggag
tacaagcccacgtcttgtggtactctgactcgacgggaggtgtatctgtga
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