Etheostoma spectabile (orangethroat darter): 116669460
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Entry
116669460 CDS
T08457
Name
(RefSeq) rho guanine nucleotide exchange factor 40-like
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116669460
Membrane trafficking [BR:
esp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116669460
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
PH
IQ_SEC7_PH
KIAA1755_C
KANSL3_1st
DHC_N2
Motif
Other DBs
NCBI-GeneID:
116669460
NCBI-ProteinID:
XP_032355231
LinkDB
All DBs
Position
19:8057081..8099146
Genome browser
AA seq
1752 aa
AA seq
DB search
MVLSDTPRAGSEAMEDCVQGALSSLYPPFESTAPPLLVQVFSVLESTYQHDSLRYLLDYF
VPAKHLLHKLQQHACSQYLGCLFLHSGWPLCLGEKVVVQLSTLDWRILRSNDFYLQVVPF
STRCPRLALKCLAPGGRTVQEILVPESQHPLVFTTEWLHSVNKERGYKREVGGGLDTCLV
STCDGVVRLPWKEVVYPKFIHDPSEELGLMPNHEGPTPNRLPSEGGSSLGGWGGSSSGEL
DSWSWDEEEDDGLPPDGLASEPALPRRRRSEDGLGRTARHPQLDGDYVELLEPRVGPDGG
VDTRQRYLEMHGICKTKTLPLCRRGKAIKLRKGRAWGYGRLEGSGSFRAVLGAKRDVVTP
KGDILPPRPPPVVTEPGRGRRSYSSSVHDSDEGDKTSRDSEGLESHQLCFDGLFKERRPG
VGKERDSNGHTQPCRDNHKGKDSESGDSFVANEIHDLTNHKIGHVIEGHSDHGSHSDSVF
EDTDKPLSGDSDATTPTSDAPERSFTGVLQSGELTNSGSQMKNSSNPKVTEERDDRKTED
RVCPRGKEVKTAGFRAPRRKRKGKGAKGRARSGGRTPQKGSKHQGKAAPPSPTTCSALTK
LPTTEDNQRKQADEPDGVPPSTNEGTADTRKRSAEKEAEPLPVCNGQSGTSLLNHSNEEA
GSGETCPDQIHAVTSKVPPLLKELDTELLQSGKLMLTGTVDRLGRALVVTEMDGSEESFS
EEEMARVLACYHRITRPAAKEKGLTVLMDCRRAPPSTLGFSALKLFQVLVPGGLGSVLVL
VEEQQESLSHNVEGAEIHMVRGTGVLQQYVDKQQLPKEMDGDFTHCHSDWLAFRLSLESL
TERCESALTLLGEALQAMETEPMPNNIKAVPLSIDKHRQLMASVLADQRLTEPQQRGGAW
LAGLTNSATGLAHKSADCRAALAATSKLYDSVDDALHRLVRLSNQRGRDLEALGRLAGLV
DKLEKCDKEIEQVQSQLEDYKDPPLSLSRLSLKQQKFKTFRETANELHSETLSVLSNLEG
WCELDWAGLSDVQIRLPPVREKLRDMSHCLSDCWTTLDNTQRLLSTLTEATQWCEVVFST
SSSPSSSSSTFPLASLPPIPPSRFQDARSLAIELGGGALLDLWTQTVERYQRTVAQVKPR
FLQPDRAQNQGQGRPKTPSATSLWDVMGSEGEGDWGLGAGGGEGGLQSWGSLASLFRPQT
CSTLKIGEEKGNKKEGAGGGGAGGAGGGKFLQNLLNPAKKSPTEAPLPPKPPRKRHPSFD
LQALLVPRRGTPTPKSESPVGGASRNSPMSWLGRRTAADPVIATSMAAAIPGWGGGGGGG
GGGGVLIRGVEVSSKEVVDHTGSPRQHVLLGRTERETGTDRAGSTAQSKLYLLWCRMLSS
ERQYVAVLKGVEETYLPLLELSDTPASIRGKVDTLFPNWASLSTFHSQNLLPAMEGALLQ
SLLQQDCFSKYREQFLQYSHYIRSKPELDSPLVTQAADFFKSKLPPASPLSPLSFPHCLQ
APTQRLEQYCEALEELGGINPASDSALSILRHAQQHGQDLRASDLIGGCPIPVVERGELV
RQGELTVCGGARRKRAGVRNVFLYQHVVIFTKQKSPSPGLTAYSYKHSIKTSEMGLTQSV
GGEGVKFEVWVRQAPRTRDCITLQAKDREDKAAWTHDIAHLLWTHAINNTELCLKESLCM
GISSKLLLDATGTQVSELDSIYSLNDRVHSSCSDSSSVGSQKEGGSPASGRDPRRSSGST
SYSQSQSPSTAV
NT seq
5259 nt
NT seq
+upstream
nt +downstream
nt
atggtcctcagcgacactccacgtgctggttcggaggccatggaggactgtgtgcaaggg
gcgctctcatcgctttatcctccctttgagagcacggcaccccccctactcgttcaggtc
ttttcggtcctggagtcgacctatcaacacgacagtcttcgctacctcctggactacttc
gttcctgccaagcacctcctgcacaaactccagcagcacgcctgctctcagtaccttggc
tgcttgttccttcactccggctggcctctgtgtttaggggagaaagtggtcgtccagctg
tccaccctggactggaggatcctgcgcagtaatgacttctacctgcaggtggtgcccttc
tcaacgcgctgcccccgtctggccttaaaatgtctggcccctggggggcgcaccgttcag
gaaatcttggtacccgagtcacagcacccccttgtgttcaccactgagtggctgcacagc
gtcaacaaagaacggggctacaagagagaagttggaggaggacttgacacctgcctggtc
agtacatgtgatggtgttgttcgacttccgtggaaggaggttgtctacccaaaattcatc
catgacccttctgaggagctgggcctgatgcccaaccatgagggccccacacccaaccgc
ctgcccagtgaggggggcagcagcctcgggggctggggtggctcatcttctggggaactg
gactcctggtcctgggatgaggaggaagatgatggtttaccaccagacggcttggcctct
gagcctgcacttccccggcgaaggcgtagcgaagatgggctcgggcgaacagcgaggcac
cctcagctggacggggactatgtggagttgttggagcccagagtgggtcctgatggaggg
gttgacacgaggcagaggtacctggagatgcatggaatttgcaagacgaagactttgcct
ctgtgcaggagaggtaaagctatcaaactccggaaggggagagcttggggatatgggaga
ctggaagggtcaggaagctttcgtgctgtccttggtgccaaaagagacgtagttacccca
aaaggtgacattttaccacctcggcctccaccagtagtcactgaacccggcagagggagg
cggtcttactcctcttctgtccacgactctgatgaaggagacaaaacaagcagagactct
gaaggcctggaaagccaccaactttgttttgatggccttttcaaagagaggaggcccggc
gtgggtaaggagagagatagcaatggccacacacagccctgcagagacaatcacaaaggt
aaagattctgagagtggcgacagctttgttgcaaacgaaatccatgacttgacgaaccac
aaaattgggcatgttatagagggccactcagatcatggatctcattcagactctgttttc
gaggatacagataaaccactgagcggagacagtgatgccacaaccccaacatcagatgca
ccagagagatcattcactggagtgttacaaagtggagaacttaccaacagtgggtctcaa
atgaagaactcatcaaacccaaaggtgacagaggaaagggatgacagaaagacggaggac
agagtttgtcccagaggaaaggaagttaaaaccgcaggattcagggcgccaaggaggaaa
aggaagggaaagggggccaaaggtagggctaggtctggtggtcgaacaccccagaaagga
tcaaaacatcagggtaaagctgctccaccaagtcccaccacctgctctgctctgacaaag
ctgccaaccacagaggacaaccaaagaaaacaggcagatgaacctgacggagtgccccct
tcaactaatgaagggacagcggacacgaggaaaagaagtgcagagaaagaagccgaacct
ttgcctgtctgcaatggccaatcaggcacatccttactaaaccactctaatgaggaggca
gggtcaggagagacatgtccggatcaaatacatgctgtaacatctaaagtgcctcccctg
ctgaaggaactggacacagagctcctgcagtcagggaagctgatgttgacaggtacagtg
gacaggctgggacgcgctctggttgtcacggagatggacggatcagaggagagcttctct
gaggaggagatggcccgggtcttggcctgctaccacagaatcactcggcctgcagccaaa
gaaaagggtctcacagtattaatggactgcagacgcgctccaccctccaccctcggcttc
tctgctcttaaattgttccaggtgttggttcctggcggccttggatccgttctggtttta
gtggaagagcagcaggagtccctttctcataatgtagaaggagccgagatccacatggtg
cgaggaacaggggtccttcagcaatatgttgacaagcaacagctgcccaaagagatggac
ggagacttcacccactgtcactcagactggctggccttcagactaagtctggagagtctg
acagagcgttgtgagagtgcccttacactcctcggagaagcactgcaggctatggagacc
gagccaatgccaaacaacatcaaggctgttcctctgagcattgacaaacacagacaactg
atggcgagcgtcctggccgaccaacgcttaactgaaccacagcaaaggggcggggcctgg
ctcgcgggactgaccaatagtgcaactggactggcacacaagtcagcagactgcagggct
gctcttgcagcgacctctaaactctacgacagcgtggatgacgccctccatcggctcgtc
cgattgtccaaccagagaggtcgggacctggaagctctgggacgactagcggggctggtg
gacaaactggaaaagtgtgataaggagattgagcaagtgcagtcacagctggaagactac
aaggaccctcctctgtccctcagcagactctcgctcaaacagcagaaattcaagacgttc
agagaaacagccaatgagctgcacagcgagactctgtcagtgctcagcaatttggagggc
tggtgcgagttggactgggcgggcctaagcgacgtccagatccgacttcctccggtcagg
gagaaactgagagacatgtctcactgtctgtctgattgctggaccaccctggataacaca
cagaggctgctgtccacattgaccgaggccacccagtggtgtgaggtggtcttctccacc
tcctcctccccctcttcctcttcttccaccttccctcttgcctctctccccccgattccc
ccgtcccgtttccaggacgctcgctccttagccatagagctgggtggcggggcgctcctt
gatctctggacccagacggtagagcgctaccagcgtaccgtagcgcaggttaaacctcgc
ttcctccagcctgacagggcccagaatcagggccaggggaggccaaagacgccatctgcc
accagcctgtgggacgtaatgggttctgagggagagggcgactggggactgggagctgga
ggaggcgagggggggctgcagtcctggggatctctggcatcgctgttcaggccgcagacc
tgctctacgctgaagataggagaggagaaagggaataagaaagagggagcagggggaggg
ggagcaggcggtgctggaggagggaagttcctgcagaatcttctgaatcctgcaaagaag
agtcccacagaggccccgctccctccaaagccccccaggaagcgccacccaagctttgac
ctccaggctcttctggtgccccgcagaggcacgcctacccctaaatctgagtccccggtg
ggtggggcgagccgtaactcccccatgtcctggctggggagacggacggcagctgaccca
gtgattgcgactagcatggctgcagccatccctggttggggaggaggaggaggaggagga
ggaggaggaggggtgttaattcgaggggtggaggtcagcagcaaggaggtggtggaccac
actggctcgccacggcaacacgtgctgctagggaggactgagagggagacagggacagac
agggccggatcaactgcacagagtaagctgtacctgctctggtgtaggatgctgagttca
gagaggcagtacgtggccgtcctgaagggggtagaggagacatacctccccttactggag
ctctcagacaccccggcctccatcagggggaaggtagacaccctcttccccaactgggcc
agcctcagcacctttcactcgcagaacctactcccggctatggagggcgctcttttgcag
agcttgttgcaacaggactgcttcagcaaataccgggagcagttcctgcagtactcccac
tacatcaggagtaaaccagaactggactctccgctggtcacacaggctgccgacttcttt
aagtccaaactccccccagcctcccccctctcccccctgtctttccctcactgtcttcag
gctcccactcagaggctggagcagtactgcgaggccttagaggagctgggagggataaac
cccgcctccgactccgccctctccatcctgagacacgcccaacagcatggccaggacctc
agggccagcgacctcatcggcggatgtccgatcccagtggtcgagcgcggcgagctggta
cgtcagggcgagctgacggtgtgcgggggggctcgcaggaagcgggccggcgtgagaaac
gttttcctctaccagcacgttgtcatcttcactaaacagaagagccccagcccgggactc
accgcctacagctacaaacacagcatcaagaccagtgagatgggtttgactcagagcgtg
ggtggggagggagtgaagttcgaagtttgggtccgacaggctcctcgaaccagagactgc
atcacgctgcaagccaaggacagggaagacaaggcagcctggactcatgacattgcccat
ctgctgtggacacacgccataaacaacacagagttgtgtctgaaggagtcactctgcatg
ggaatttctagtaagctgctgctggatgcgacaggaactcaagtctcagaactggactct
atctacagtctcaatgacagagtccacagtagctgctcagactcctcctctgtcggcagt
cagaaggaagggggatccccggcgtctggaagggaccccaggagaagctccggatcaaca
agttactcccagagtcagtctccctctacagccgtgtaa
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integrated database retrieval system
