Etheostoma spectabile (orangethroat darter): 116669481
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Entry
116669481 CDS
T08457
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-7-like
KO
K16498
protocadherin delta 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
116669481
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
esp01009
]
116669481
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
esp04515
]
116669481
Protein phosphatases and associated proteins [BR:
esp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116669481
Cell adhesion molecules [BR:
esp04515
]
Cadherins
Protocadherins
116669481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Mid2
TMEM154
LYRIC
Adeno_E3_CR2
DUF1180
Gp80
Motif
Other DBs
NCBI-GeneID:
116669481
NCBI-ProteinID:
XP_032355247
LinkDB
All DBs
Position
19:complement(19123459..19128001)
Genome browser
AA seq
1044 aa
AA seq
DB search
MRTTGAVDYLYYSMLILQLVHQPAAKQVLRYRLAEEGPXDVRVGNVAGDLGIVAGSGEVT
FTLESGSDFXKIDNITGELATNERRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWVD
LFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQD
NGENSRRLGSSGDSFSGKRRFEEGASRSSVFELQVADTTDGEKQPQLIIKGALDREQRDS
YELTLRVRDGGDPPRSSQAILRVMITDVNDNSPRFEKSVYEADLPENSSPGAPILQLKAA
DADVGVNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREEVSQLRFTVMARDRGQP
PKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGIANVAEDVVVDTPIALVQVSDRDQG
ENGIVTCTVVGDVPFQLKPASEMEGEQNKKKYFLHTSATLDYEATQEYNVVIVAVDSGSP
SLASNNSLIVKVGDTNDNPPIFSQNVVEVSFPESNAPGERVTTVAAIDADSGKNAEIAYS
LDSSVNGIFSIDADSGDIRVNTILDREQTERYEFKVIAKDKGINTLQGSATVVVLVADXN
DNDPKFMQDVFTFYIKENLEPNSPVGMVTVIDADKGHNAEMSLFIEEEEDIFSIENDTGT
IFSSLSFDREQKXTYTFRVKAVDGGDPPRSATATVSLLXMDDNDNAPTVTFPINSSYTLL
PPSSNIRTVVRTVIATDADTGINADLNYSIIGGNPFKLFEIDGGTGVISLVGKLEQKHYG
LHRLVVQVNDKGQPSQSTTTLVHVYVNETLSNSTVVDTQVAKSLSTSLNTNIAGDPNYDL
SKQRLSIVIGVVSGIMTVILIILVVVMARYCRPKNKNGYEAGKKDHEDFFTPQQHDKSKK
PKKDRKKQKSKQPLYSSIVTVEASKPNGQRYDGVNEKLSDSPGMGRYRSVNGGPGSPDLA
RHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGTGDNISLGSDHCSEYSSQTIN
KYNKQVRRHVSMLFFCFPSSLHHS
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgaggactactggtgcagtggactatttgtactatagcatgctcatcctgcagcttgtg
catcagcccgctgccaagcaagtgctccggtaccgtttggctgaggagggaccgnccgat
gtcagagtagggaacgtagccggcgacctgggcattgttgccgggtccggcgaggtgaca
ttcacgctagagtcaggctctgattttntaaaaatagacaacataacaggtgagctcgcc
accaatgagaggcgcatagaccgtgaaaaattacagcagtgccaaatgatatttgatgaa
aacgagtgttttatagattttgaggtgtcagtgattggaccagcccaaagctgggttgac
ctctttgagggaaaagtaatcatattagatataaatgataacacaccgtctttcccctcg
cctgtcctgacactgtctgtggaggaaaacagacccattggaacgctttatctgctcccc
acagccacagacagagattttggcagaaatggaatagagcgatatgagcttatccaggac
aatggggaaaactcaaggcgcttgggctcttctggggattcattctcggggaagaggaga
tttgaggaaggagcaagcaggagcagcgtctttgaactgcaagttgctgacactactgat
ggagagaagcagcctcaactcatcattaaaggggcccttgacagggaacagagagactcc
tatgagctcacactccgtgttagggatggaggtgatcccccgcgctcctcccaggccatt
cttagggtgatgatcactgatgtgaatgacaacagccctcgatttgagaagagtgtgtat
gaagctgacctaccagaaaacagctcccctggtgcccccatactgcagctcaaagcggct
gatgcagacgtgggggttaatggtcaaatagagtatgtgtttggggcagccacagagtca
gtaaggagactgctgaggttggatgaaagcacagggtggctgagtgtgttgcaccgcatc
gaccgtgaagaagtgagccagcttaggttcacagtaatggcccgtgaccggggccaacca
ccaaaaatggacaaggccactgtggtgttgaacattaaggatgaaaatgacaacgttcct
gctatagagataaggaaaattggacgcattttcttaaaagatggcatagccaacgtggcc
gaggacgtagtggtggacacacccattgccttagttcaggtgtcagaccgtgaccagggg
gaaaacggcattgtgacctgcacagtggtaggggatgttccctttcagctcaaaccagcc
agcgagatggagggtgagcagaataaaaagaaatatttcctccacacgtctgcaacgctg
gactatgaggccacacaggagtacaatgtggtcatagtggctgtggactctggaagcccc
agtctggcaagtaataactctcttatcgtcaaagtgggcgacactaacgacaaccctcct
atcttcagccagaatgtagtagaggtgtcgtttccagaaagcaatgcccctggtgaacgg
gtgacaacagtagcagccatcgatgcagatagtgggaagaatgctgaaatagcctattcc
ctagactcatcagtaaatgggattttctctattgacgcagacagtggagacatccgagta
aacaccattctggatagagagcaaacggagcgctacgaattcaaagtgatagccaaagat
aagggcataaacactctacagggttcagcaacagtggttgtccttgtggcagacnaaaat
gacaatgatccaaagttcatgcaggatgtgttcactttctacattaaagaaaaccttgag
ccaaacagcccagttggcatggtcacagtcattgatgcagataaaggccataatgcagag
atgagtcttttcattgaggaagaggaggacatcttttccattgagaatgacacagggact
attttctccagtctgtcgtttgaccgagagcaaaaanccacatacacattccgtgtcaag
gctgtggacggtggtgatccacccagatccgccaccgccacagtttcactcttanatatg
gatgataatgacaatgcaccaacagtcactttcccaataaacagctcctacactcttctt
cctccctccagcaacatcagaacagtagtcaggactgtcatagccactgatgccgacact
ggcatcaacgcagacttgaactacagcatcattgggggaaacccctttaagctgtttgag
attgatgggggcactggggtcatttcactggtggggaagttggagcagaagcactatggc
ctccacagactagtggtccaggtaaacgacaagggtcagccttcacagagcaccacgaca
ctagttcacgtgtatgtcaatgagacactttccaattccacagttgtggacacccaggtg
gctaagagtctgagcacgtctctgaacaccaacattgccggggaccccaactatgatcta
agcaaacagcggctaagcatcgtcattggagtagtttctggcatcatgacggttatcctc
attattctagtcgtcgtcatggcccgttactgccgtcccaagaataagaacggctacgag
gccggcaagaaggatcacgaagacttcttcacgccacagcagcatgataagtccaagaag
cccaaaaaagataggaagaaacaaaagtccaaacagccactctatagcagtatcgtcacc
gtagaggcctccaaacccaacgggcagcgctacgatggcgtcaacgagaagctgtcggac
agtcctggcatgggacgctaccggtcagtcaacggaggaccagggagcccagatctggct
cggcactacaagtccagttcaccgctccctactgtccagcttcacccgcagtctccgaca
gctggaaaaaagcaccaggcagttcaggacctgccccctgccaacacctttgttggcacc
ggagataacatttcccttggatctgaccactgctctgaatacagcagtcaaaccatcaac
aagtacaacaaacaggtaagaagacacgtttctatgctctttttttgttttccttcttcc
ctccaccactcttaa
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integrated database retrieval system
