KEGG   Etheostoma spectabile (orangethroat darter): 116669489
Entry
116669489         CDS       T08457                                 
Symbol
col4a5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
  KO
K06237  collagen type IV alpha
Organism
esp  Etheostoma spectabile (orangethroat darter)
Pathway
esp04382  Cornified envelope formation
esp04510  Focal adhesion
esp04512  ECM-receptor interaction
esp04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:esp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    116669489 (col4a5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    116669489 (col4a5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    116669489 (col4a5)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    116669489 (col4a5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:esp04147]
    116669489 (col4a5)
   00536 Glycosaminoglycan binding proteins [BR:esp00536]
    116669489 (col4a5)
Exosome [BR:esp04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   116669489 (col4a5)
Glycosaminoglycan binding proteins [BR:esp00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   116669489 (col4a5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 116669489
NCBI-ProteinID: XP_032355268
LinkDB
Position
19:complement(11198252..11280931)
AA seq 1691 aa
MNRDLKSLRHLAVPLLFLALSVAVQRADSAACHGCVGSKCDCSGAKGDKGERGFPGLTGQ
PGVPGFPGPEGPIGARGEKGSDGAQGPTGPKGIRGPSGLPGFPGTPGLPGLPGQDGPPGP
RGLAGCNGTKGERGFPGSSGIPGQQGRPGPPGLPGQKGDPGDVISTNRFGETGAVGLPGL
PGATGAPGPTGLQGPVGPPGPRGYEGRPGPPGPPGPKGNMGLNFQGPKGERGDTGMPGPP
GPPGQVGEQKKPPETEIQRGDKGDPGLPGSPGDRGFPGPPGPEGGQKGDKGEPGEPGKRG
KPGKDGDPGTPGYPGPKGDSGLPGPPGRDGERGFKGDQGYPGPPGVVIGGPTVGRVGPKG
EPGFPGTPGSKGDRGLPGLSGPPGPPGLSAIGGTGPPGPPGFPGERGQKGDLGPPGLSLP
GSPGRPGSPGGQGQPGPPGAPGFSTPGQICIPGEPGRPGVQGETGYPGETGQKGEKGDTC
VNCFGSTSGIPGPPGPPGQPGFPGTPGSPGIKGDRGFSGTPGAVGPPGRPGPQGSPGFPG
GKGDPGDVITVNGLRGEKGDTGFPGSPGLPGLDGRPGRDGQQGSPGPKGAPGSLLVKGER
GSPGEPGLSGIPGDRGPPGSPGYGPPGPNGEKGSQGVSGRPGGPGAPGAKGEPGLTVADK
GLPGPRGPEGEPGLPGSPGSPGQPGQTGFPGSPGSKGDPGLPGIGLPGPPGAKGFPGIPG
QPGAPAAPGRPGVDGLPGQPGFPGPKGEPGFGLPGPPGLPGVPGAKGFTGPKGDPGFPGG
PGSPGRSGFDGSPGLKGDAGTPGTPGARGPPGSPTIGSLGAQGPPGPPGPMGPPGEKGFP
GSNGEKGDPGPPGLDIPGLPGDRGTPGFPGSPGPVGTPGPPGGPGRDGLPGLPGLKGDMG
PMGSPGPSGESGRPGGPGGPGPKGEPGFPGRDGGPGGPGAKGDKGDAGIQGPPGTIDPSQ
ILKGQKGEPGLSGGPGFSGQKGIAGLPGDSGLPGSDGRPGLPGPPGPKGDPGIPGGPGGP
GLSGAKGGMGEMGFPGPSGQKGLPGQPGRPGSPGQPGGPGFPGAKGEPGSAGVGPPGLSG
PKGEPGQPGFQGNSGLKGTAGSPGLPGLPGGPGPKGDSGIPGLQGPPGIPGPKGLDGGPG
TPGSTGAPGRPGESGRPGGPGLPGDKGQAGRDGIPGPAGIKGDPGLPGYGGPGAPGLPGL
PGSKGDAGLPGPSGSPGFPGTKGETGFPGSPGLPGNIGPPGPPGRALLGPKGSQGPPGPP
GRAGPAGPPGAPGPEGPRGPSGLGGVKGEKGIPGAPGQPGFAGQKGESGIPGFPGPSGLP
GSPGLKGDIGLPGVPGFPGQKGDQGLPGATGLPGDPGDTGDTGPPGDSGIAAAPIYVKGE
RGPPGVQGQPGGRGQPGSPGREGLPGQPGAPGDAGPEGPPGFSGPPGRKGDNGPAGQPGQ
RGYPGPPGSDGPQGLPGPPGSVSAAHGFLITRHSQAQEVPFCPEGTSLIYDGYSLLYVQG
NERAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITG
EGIKPFISRCAVCEAPAMVIAVHSQTIQIPSCPSNWEALWIGYSFMMHTSAGAEGSGQAL
ASPGSCLEEFRSAPFIECHGRGTCNYYGNSYSFWLATVEQSEMFRKPQAETLKAGNLRTR
VSRCVVCMKRT
NT seq 5076 nt   +upstreamnt  +downstreamnt
atgaacagagacttgaagagcctgcgccacctcgccgtgcctctgctcttcctcgcgctg
agcgtcgcggtgcagcgagccgactccgcggcttgccatggatgtgtggggtctaaatgt
gactgcagcggagcgaaaggagataagggcgagcggggctttccaggtctcacgggacag
ccaggagtccccgggttccccggaccggaggggccgatcggagccagaggagagaagggc
agtgatggagctcaaggaccaactggtccaaaaggaataagagggccgtctggactgcca
ggatttccaggaacgcctggacttccaggtctgcccgggcaggacggacccccaggcccc
agaggattggcgggatgcaacggtacaaagggtgaaaggggtttcccaggaagttcagga
atccccggacagcaaggacggccgggtccacctggtctgccgggacaaaagggcgacccg
ggtgatgtgatctccaccaatcgttttggagagacaggagcagtcggattgcccggatta
cctggagctactggagctcccggtcccaccggtttgcaaggtccagtcggccctccggga
cccagaggctatgagggtcgtccaggtcccccaggacctcccggaccaaaagggaacatg
ggattgaacttccaaggacccaaaggagagaggggtgacactggtatgccaggacctcct
ggtcctcctgggcaggtcggagaacagaagaagccacctgagacggagattcagagagga
gacaagggtgatccaggtcttccaggttccccaggtgaccgaggctttccaggacctcct
ggtcccgagggtggccagaaaggagacaagggagaaccaggagaaccaggcaaacgaggc
aaaccaggcaaagatggcgatcccgggactccaggctaccccgggcccaagggagactca
ggcttgccaggtcctccaggcagggatggagagagaggatttaaaggggatcaaggatac
ccaggcccaccaggagtggtgatcggcgggccgacggtgggtcgggtcggccctaagggc
gagccagggttccccggcaccccggggagcaaaggagacagaggactaccaggtttgtca
ggacctccaggacctccgggactttcagctatcggtggtaccggtccacccggcccccca
ggcttccccggagagagaggtcagaagggggaccttggcccaccaggcctgtctttgcca
ggttccccagggcgtccagggtctcctggtggccagggtcaaccggggccccccggggct
cctggcttttccacaccagggcaaatctgcattccaggcgagcccgggcgtcccggggtg
cagggagagacgggttatccaggggagacgggccagaaaggtgagaaaggcgacacctgt
gtgaactgctttggcagcaccagcggcatcccaggacccccaggacctcccggacagccc
ggattccctggaacccctggctccccgggtatcaaaggagacagaggattttcaggaaca
cctggtgccgttggaccgcctggtcgccctggtcctcaaggttctccagggttccccgga
ggaaagggagacccaggcgatgtcattacagtcaacggcttgcggggagagaaaggggac
actggattcccgggatccccagggctccccggtctggacggtcggcccggtcgcgatgga
cagcaaggatctccgggacccaaaggagctcctggctctctgctggtgaaaggagaacga
ggcagccctggtgagccaggtctttcaggtattccaggagacaggggtcctccagggagc
cctggctacggacctccaggacctaacggagagaaaggtagccagggcgtctcgggaaga
cctggaggtccgggtgcacccggtgctaaaggagaaccgggcctgacggtggctgacaaa
ggcttaccaggacccagaggaccggagggcgagcccggactgcctggctcaccaggtagc
ccgggtcagcccggacagactggtttccctgggtcaccaggatcgaagggtgaccctgga
ctcccaggcatcggactcccaggaccccccggagctaaaggattcccaggtatccctggc
cagccaggagctccagcagcaccgggcagaccaggagtagacggactccctggccagcct
ggatttcctggacccaagggcgagcctggctttggcctccctggccccccaggtttacca
ggagtacctggagctaaaggtttcaccggaccaaagggagatcccggtttccccggcggc
cccggctcacctggtcgatctggatttgatggctctccaggactgaaaggtgacgccggt
acacccggtacacccggagctcgtggtccccccggatcccccaccattggctcactgggg
gctcaaggcccccctggaccccctggaccaatgggacccccaggcgagaaaggattccct
ggatcaaacggagagaagggagaccctggccccccaggtctagatattccaggtctgcca
ggagacagaggaactcccggtttcccaggttccccgggaccagttggaactccaggaccc
cctggaggacctggacgggacggcctgcctggactgccaggtcttaaaggagacatgggc
cccatgggatctccaggaccttctggagaatcaggaagaccaggaggacccggcggtcca
ggacctaaaggtgaacctggattcccaggccgagacggtggacccggcggccccggtgct
aaaggagataaaggagatgccggcatccagggacccccaggaaccattgacccctcacag
attctgaagggacagaaaggagaacctggactgtcaggtggaccaggattttcaggtcag
aaaggcatcgccggtctccctggtgattccgggctaccaggatcagatggacgacccgga
ctccccggaccaccaggtcccaaaggagatcccggcatcccaggaggccctggaggtcct
gggctttcaggagctaagggcggaatgggagaaatgggatttccaggtccgtcagggcag
aagggtctaccaggtcagccaggtcggcctggatccccgggacagccaggaggacccggt
ttccctggggccaaaggtgaaccaggctctgctggagtcggaccaccgggattgtctgga
cccaagggtgaaccaggtcagccaggtttccaaggaaattcaggactgaaaggaactgca
ggatcccccggtctcccagggttaccaggagggcctggtcccaaaggcgacagcggaatc
ccaggactacaaggacctccgggtatccccggtcccaagggtctcgacggagggcctggt
acaccgggttccaccggagctcccggtagaccaggagagtccggccgaccaggaggacca
gggttgccaggagacaagggtcaggcaggtcgggacgggatcccaggaccggctggaatc
aaaggagaccccgggcttcctggttacggcggacccggtgctccggggcttccagggttg
ccaggctcaaagggagacgccggtctccctggcccctctggcagtcctggtttccccggc
actaaaggagaaaccggcttccccggctcccctggccttcccggcaacatcggacctcct
gggcccccgggtcgggctctgctgggtcccaaaggatcacaaggaccccctgggcctccc
ggtcgagcaggtcccgcaggtcctccaggtgcacctggccccgaggggccccgcgggccc
tcagggctcggcggcgtgaagggagagaaggggatccccggcgctcccggccagccgggc
ttcgccggacagaagggagaaagcggcattcccggattcccgggtccctctggtcttccc
ggttctcctggtttgaagggagacatcggtctgcccggcgttcctggattccctggacaa
aagggagaccagggactccccggtgccaccggccttcctggagatcctggagacaccgga
gataccggccctcctggcgactccggcattgccgcggctcccatctatgtgaagggagag
cgaggaccccccggtgttcagggccagcctggtggtcggggacaacccggctctcctggg
cgtgaaggacttccgggtcagcccggtgcccccggcgatgctggtcccgagggtcctccc
ggcttcagcggcccgcccggcaggaagggagacaacggcccggccggtcagcctggtcag
cgtggctaccctggtccccccggttccgacggtccacagggtctccccggtccaccggga
tccgtctccgctgcccacggcttcctcatcacccgacacagccaggcccaggaagtgccc
ttctgccccgaaggaaccagcctcatctacgacggctactccctgctgtacgtgcagggc
aacgagagggcccacggacaggacctcggcacggccggcagctgtctgcgccggttcagc
accatgcccttcatgttctgcaacatcaacaacgtctgcaacttcgcctcccgcaacgac
tactcctactggctgtccacgcccgagcccatgcccatgtccatggcccccatcaccgga
gagggcatcaagcccttcatcagcaggtgtgcggtgtgtgaagccccagccatggtgatc
gcagtccacagtcagaccatccagattccctcttgcccttcaaattgggaagctctgtgg
atagggtactccttcatgatgcacaccagtgcgggtgcagagggctccggtcaggccctg
gcctcccccgggtcctgcctggaggagtttcgcagcgcccccttcatagagtgccacggc
agagggacgtgcaactactacggcaactcctacagcttctggctggccaccgtggagcaa
tcggagatgttcaggaagccccaggcggagactctgaaggcgggtaacttacgaacgcgc
gtcagccgttgcgtggtctgcatgaagaggacgtaa

DBGET integrated database retrieval system