Etheostoma spectabile (orangethroat darter): 116669723
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Entry
116669723 CDS
T08457
Symbol
srsf5
Name
(RefSeq) serine/arginine-rich splicing factor 5 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03040
Spliceosome
esp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116669723 (srsf5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116669723 (srsf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esp03041
]
116669723 (srsf5)
Spliceosome [BR:
esp03041
]
Common components
Common spliceosomal components
SR proteins
116669723 (srsf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_5
Nup35_RRM_2
CDC45
DUF7707
RSRP
Motif
Other DBs
NCBI-GeneID:
116669723
NCBI-ProteinID:
XP_032355634
LinkDB
All DBs
Position
20:complement(1030942..1037945)
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AA seq
339 aa
AA seq
DB search
MSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK
ELCSERVTIEHARSRRGRGGGPGGMGRSSGGGFGGGGGGSGGGGGYRQSRSSGSRLDRYG
PPVRTDHRLIVENLSSRISWQDLKDLMRKAGEVTFVDAHRPNKNEGVVEFASRSDMKNAI
SKLDGSELNGRKIKIFEDSRSHSKSRSRSYSRSRSRSRSRNRSRSRSRSVSRTPEKKTSG
GGRATGRSPSRSKSRSKSRSKSRSKSAPNPAPSLAPNPLQVSLQVPLQVSLQVPLQVSLP
FTCSCSEQTVPLPFSFSFTFPLRICRQQTLRLVHLSTIK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgagtggttgtcgagtcttcatcggccgtttgagcccgcatgccagagagagagacgtg
gagaagtttttcaagggatatggacggattcgggaaatcaacttgaagaatggatttggc
tttgtggaatttgatgatcacagagatgcagatgatgctgtgtacgagttgaatggcaaa
gaattgtgcagtgaaagggtcactattgagcatgctcgctccagaagaggaagaggtggc
ggccctggaggaatgggacgttccagtggcggtggctttggtggcggcggaggtggcagt
ggtggcggtggcggctatcgccaatctcgcagcagtggatccagactggacaggtatggc
cctcctgtacggacggaccacaggcttattgtggagaacctttcttcacgaatcagctgg
caggacctgaaagacctaatgagaaaagcaggtgaagttacctttgtggacgcccacagg
cccaacaaaaatgaaggagtggttgagtttgcatcccgcagtgacatgaagaatgccatc
tccaagcttgatgggtcagagctgaatggacgcaagattaagatctttgaggacagcaga
agtcacagcaagagccgctcccgcagctactcccgctcaaggagtcgttccagaagtcgc
aaccgctccaggagccgatccaggtctgtaagtcgcacccccgagaagaagacatcagga
gggggcagggccacaggcagatccccctccaggtcaaagtcccgctccaagtcccgctcc
aaatcccgctccaagtccgctccaaatcccgctccaagtctcgctccaaatccgctccaa
gtctcgctccaagtcccgctccaagtctcgctccaagtcccgctccaggtctcgctcccg
ttcacctgctcctgttcagaacaaacagtcccgctcccgttctcgttctcgttcacgttc
ccgctccgcatctgcagacagcaaacactgagattggtacacctgtcgaccataaaatag
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