Etheostoma spectabile (orangethroat darter): 116669779
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Entry
116669779 CDS
T08457
Symbol
gabrb1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04080
Neuroactive ligand-receptor interaction
esp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116669779 (gabrb1)
04082 Neuroactive ligand signaling
116669779 (gabrb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116669779 (gabrb1)
Ion channels [BR:
esp04040
]
Ligand-gated channels
GABA-A
116669779 (gabrb1)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
116669779
NCBI-ProteinID:
XP_032355711
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Position
20:complement(19323907..19384303)
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AA seq
502 aa
AA seq
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MGTWPKFASLRSCGTKSSAGSELVMWTTLDRGCWGVSCLSLLASVVCGAQSANEPSNMSY
VKATVDKLLKGYDIRLRPDFGGAPVDVGMSIDIASIDMVSEVNMDYTITMYFQQSWRDKR
LSYTGIPLNLTLDNRVADSLWVPDTYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT
TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWQGGSNAGSVTGVENIELPQFDII
DYQTLSKKAVFATGSYPRLSLSFKLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAA
RVALGITTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGR
GPHLQKKVAEKAAKSNNENKSRLESNKVQVDAHGNILLTNLTSEMSGADMMGVLNDPRAT
MFSYDSASIQYRKPMASRDLYGRPAIDRPMGHKKGRLRRRASQLKVKIPDLTDVNAIDKW
SRVIFPIAFTFFNLVYWLYYVN
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgggaacatggcctaagtttgcatccctgagatcttgtggtacaaagtcgtcggcagga
tccgagttagtgatgtggactactctggaccgcggatgctggggagtctcgtgcttgtcc
ttgctggcgagtgtggtctgcggggcgcaaagcgctaacgaacctagcaacatgtcctac
gtgaaagccaccgtggacaagctgctcaagggctatgacatccgtctgcggcctgatttt
ggaggcgcccccgtggatgtaggcatgagcatagatatcgccagcattgacatggtgtct
gaagtcaacatggactacaccatcaccatgtacttccagcagtcctggagagacaagcgc
ctctcatacacaggcattcctctcaatctcaccctggacaaccgtgtggcagactcgctg
tgggtccctgacacttacttcattaatgacaagaagtcctttgtacacggggtgacggtg
aagaaccggatgatcagactgcatcccgatggaactgtgctctacggtctcaggatcacc
acgacagcggcctgcatgatggacctgcgcagatacccactggatgagcagaactgcacc
ttggagattgagagctatggatacaccactgacgacattgaattctactggcagggagga
agcaacgcaggctcagttaccggggtggagaacatcgagctgccccagttcgacatcata
gactaccaaacgctctccaagaaagccgtgtttgccacaggctcttatccacgtctgtcc
ctgagcttcaagttgaagaggaacattggctatttcatcctgcaaacctacatgccctcc
accctgatcaccatcctgtcctgggtctccttctggatcaactatgatgcctcggctgct
agagtagccttaggtataactacggtgctgaccatgaccaccatcaatacccaccttagg
gagactctacccaagatcccctacgtcaaggccattgacatttaccttatgggttgcttt
gtctttgtctttctggccttgctggagtacgcctttgtcaactacatcttcttcggtcga
ggtcctcacctgcagaagaaggtggcagagaaggccgccaagtccaacaacgaaaataag
agcagactggagagcaacaaagtgcaggttgatgcccatggcaacatcctcctgaccaac
ctaaccagcgagatgagtggagcagacatgatgggcgttctcaacgaccctcgggctacc
atgttctcttacgacagcgccagcatacagtaccgcaagccgatggccagccgagacctg
tacggacgaccggccatcgaccggccaatgggccacaagaagggtcgcttgcggaggagg
gcctcgcagctcaaagtcaagatcccggacctcacggatgtcaacgccatagacaagtgg
tcccgtgtcatcttcccaattgcattcaccttcttcaacctggtctactggctttactat
gtcaactag
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