Etheostoma spectabile (orangethroat darter): 116669785
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Entry
116669785 CDS
T08457
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04080
Neuroactive ligand-receptor interaction
esp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116669785
04082 Neuroactive ligand signaling
116669785
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116669785
Ion channels [BR:
esp04040
]
Ligand-gated channels
GABA-A
116669785
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
DUF5522
Motif
Other DBs
NCBI-GeneID:
116669785
NCBI-ProteinID:
XP_032355716
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All DBs
Position
20:19400180..19428499
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AA seq
452 aa
AA seq
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MRGRWSSHSIPVLVSLIVLWQTRSKADSNSTRNVKDITTFTKILDSLLDGYDNRLRPGLG
DRVTEVKTDIYVTSFGPVSDTDMEYTVDVFFRQSWKDERLKFHGPMNILPLNNLMASKIW
TPDTFFHNGKKSVAHNMTMPNKLLRIMEDGTLLYTMRLTVQAECPMHLEDFPMDSHSCPL
KFGSYAYTKTEVTYIWTRNASKSVEVADDGSRLNQYDLVGQTAGEETIKSSTGEYTVMTA
HFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARN
SLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVSEKKKEASVMKK
NNAYAVAVANYAPNITKDSTLPTISKCALSDPNHKTPAEMKPEQNKKTFNSVSKIDRISR
IMFPVLFGSFNLVYWATYLNREPVLVDAGPSK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgagaggacgatggagctcacattccatccctgtattggtctctttgatcgtactgtgg
cagacacggtcaaaagcagattccaattcaacacgtaacgtcaaagacatcacaaccttc
actaagatcctggacagtctgctggatggatacgacaacaggctgagacctggcctggga
gaccgagtaaccgaagtgaagactgacatctatgtgaccagtttcggtccagtgtctgac
acagatatggagtacaccgttgatgttttcttccgtcagagttggaaggatgagcggctg
aagttccacggaccaatgaacattctgcctctcaacaacctgatggccagtaagatctgg
acccctgacaccttcttccacaacggcaagaagtcggtcgcccacaacatgaccatgccc
aacaagctgctgaggatcatggaggacgggacccttctctacactatgaggctaacggtt
caagctgagtgccccatgcaccttgaagacttcccaatggactctcactcatgtcctctc
aagtttggcagctatgcctacactaagacagaggttacttacatctggactcgtaatgcc
tccaagtcagtggaagtggcagatgacggatccagactcaaccagtatgacttggtgggc
cagactgcgggggaggagaccattaaatccagcactggtgaatacacggtcatgacagct
cacttccatctaaagaggaagatcggctactttgtgatccagacgtatctgccctgtatc
atgacggtcatcctctcccaggtctccttctggctcaatcgagagtcggtgccagccaga
actgtctttggtgttaccacagttctcaccatgacaaccctgagtattagtgcccgtaac
tcactgcccaaggtggcctatgctacagccatggactggttcatcgccgtctgctacgcc
ttcgtcttctctgcactaatcgagtttgctacagtcaactacttcaccaagcgaggctgg
gcctgggacggaaagagtgtcgtcagtgaaaagaaaaaggaagcgtcggtcatgaagaag
aacaacgcctacgctgtagccgtggctaactacgctcccaacatcacaaaggactccacg
ctacccaccatctccaagtgtgctctgagcgatcccaaccacaagaccccagcggagatg
aagcctgaacagaacaagaagacctttaacagcgtcagcaagatcgaccgcatctcccgc
atcatgttccccgtgttgtttgggagcttcaacctggtctactgggccacctacctgaac
agagaaccagtccttgtggacgcgggtccttccaaatga
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