Etheostoma spectabile (orangethroat darter): 116670047
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Entry
116670047 CDS
T08457
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
116670047 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esp03400
]
116670047 (mlh3)
DNA repair and recombination proteins [BR:
esp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
116670047 (mlh3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
HATPase_c_3
DNA_mis_repair
HATPase_c
WW
Motif
Other DBs
NCBI-GeneID:
116670047
NCBI-ProteinID:
XP_032356202
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Position
20:10788938..10798009
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AA seq
1205 aa
AA seq
DB search
MIKCLTKEVQGKLRSGVAIPSLQQCLEELILNSIDAQATCVGVRMDMEAYKVQVIDNGAG
INAEDMELVGNRYHTSKCSSVEDLDNLRWYGFRGEALASLVSLATLVEISSRTRSSVKTH
VKIFKDGKGMDVFEADTARPSAGTTVVICNFLHNMPVRRKRMDAVLEGERIRHRVEAISL
MHPSVSFTLKNDCTGAMMVQLPKARNTYHRFIQMHSLGRAQKLGEISYTHGQFEVTGYIG
KEGHYNNSLQFLYVNDRLLLKTRMHKLLNFLLRRLSSSNQKNGSPDGQSTIRSPKHKRSQ
ELHGVYIINIKCSYSEYDICLEPAKTLIEFKDWDRILLCIEEAVKAFMSRENLVAELSQE
DLDYLPPELFGTHNSDSGNGASTLDCSIGMKLASDPVHRKRKDDFVCEDSVSRESGQMEC
KEETEQQGKKKITVNEFLKIKREGSINKEYRYESQCDLAGLEPTSDNHITEEVEPTFSEA
KEGSPMLCMSSSVRQIESKKIELSKEKVIILNNATSTSNVTSLDSITQQIQSDLNSIEQR
LPDCQSAGGHEHTLVSNRKISLSDPYIHEKLQTVFQQQILAQKCEETSFASKRKISLHAG
NDRICQKPCKDFAPIVPPKLPRLATCQKLALCKESGSLEKFRRVYGKSDELKLSSQETQN
NTKLPRTDSFVLNSQKLLFCQKDQPKGGVIETEETQSILRSPPTLSAFTRLKPVSRQNRG
KTSLAAKLNHLKQHRTDDSKVLAHLSSTALQDNTCHSGNDGSQDGNNNNNDCGLNLEPVP
GCRTNPLLAEREVVTTSGDWLHHYDASVGKTVYVNKVTGHSRYEDPPTDETQVRCTSDVS
NMAVIVISETGMEPRCYPFQIDLVLPFLPKSRTDRVISSGLDDRGTPQTDLTANYANGES
SNSLALLYSKWNNPVFVRPPTVGVDISSGQAEGLAVKIHNILFPYRFSKAMICSMKVIHQ
VDKKFLACLINTREGEPAALNETEGNLLVLVDQHAAHERVRLEHLVADSYEDNPDAPGER
RLCSSTIFPPLEISVTEEELRLLRSCQAHLQCLGLEVKFSQAADPHIFVRKVPLCFMEKE
SNEIRRGRPSVIKPIVEEYLQEQIELLRSTGRMRGTLPLTVLKVLASLACHGAIKFNDSL
SRDECYSLVASLSSCQLPFQCAHGRPSIAPLVDTLHLDKDEKELQKPNLQKLRRMYKAWE
LYGNR
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgattaagtgcttgactaaagaggttcaggggaaacttcgctccggtgtcgctatcccc
tcgcttcagcagtgtttagaggaacttatcctgaacagcatcgatgcacaggcgacctgt
gtgggagtcaggatggacatggaggcctacaaagttcaggtaatcgacaacggtgccggg
attaacgccgaggatatggagttagtgggaaaccgataccacacaagcaaatgcagctct
gttgaagacctggacaacctcaggtggtatggtttcagaggagaagccctggcgagttta
gtttctctcgccacattagttgaaatctcatcccggaccagatcgtcagtgaaaactcac
gtcaaaatcttcaaggatggcaagggcatggatgtgtttgaagcagatactgctcgacct
tctgcggggacaactgttgttatttgtaacttcctccacaacatgccagtccggaggaag
aggatggatgctgtcctggagggtgaaaggatcagacacagagtggaggctatatctctg
atgcatccctctgtgtctttcaccctaaagaatgactgcacaggagccatgatggtgcag
cttcctaaagctagaaacacctaccataggtttattcagatgcacagtcttggacgagca
cagaaacttggagaaatcagctacacacacggacagtttgaagtgaccggttacattggc
aaagaaggccactacaacaacagcttacagttcctttatgtaaatgacagactgctgctg
aaaacacggatgcacaagctcctgaactttctcctacgcagactgagcagttcaaatcag
aaaaatggcagtccagatgggcagtctacaatcaggagtccaaagcacaaacgaagccaa
gaactgcatggagtatacatcatcaatatcaaatgctcttactcagagtatgacatctgt
cttgagcctgccaaaactctaatagagttcaaagattgggaccgcattttgctgtgtatc
gaagaggcagtaaaagcgttcatgagcagggagaatttggtggcggagctttctcaggaa
gacttggattacttacctccagaactgtttggcacacacaattcagatagtggcaatggt
gcttccacactagattgcagtattggaatgaaactggcatctgatcctgttcatcgaaag
cgcaaagatgactttgtatgtgaggacagtgttagccgggagtctggtcagatggagtgc
aaagaagagactgaacaacaggggaagaaaaagataactgtaaatgagtttttaaagata
aaaagggaaggaagcataaacaaagaatatagatatgagtcacaatgtgatcttgctgga
cttgaacctacatctgataatcacattactgaagaagtggagccaacattcagtgaagca
aaggaaggctctccaatgttatgtatgtcaagttcagtcagacaaatagaaagtaaaaaa
attgaactctcaaaagaaaaagtaataattttaaataatgctacctcaaccagcaacgtg
acttcactagacagcatcactcaacaaattcagtctgatttaaacagtattgagcaacgg
ttacctgactgccagagtgcaggaggacatgaacatactttagtaagtaacagaaaaatc
agtctgtctgatccatacattcacgaaaagctgcagacagtatttcagcagcaaatctta
gcgcagaaatgtgaagagacatcctttgcatcaaaacgcaaaatctcactgcatgcaggc
aatgacagaatttgtcagaaaccatgcaaagactttgctcctatcgttcccccaaaatta
cccagacttgcaacttgtcaaaagttggccttatgcaaggagtctggatcccttgagaag
tttagaagagtatatggaaaatctgatgaactaaaattatcctctcaagagactcagaat
aacactaaacttcctcgtacagacagctttgttttgaattcccagaagttgttgttttgc
cagaaagatcagccaaagggtggagttatagaaacagaagagacgcagagcatccttcga
agcccaccaaccctctcagcattcaccaggttaaaaccagtctcaaggcagaacagaggc
aaaacatctttagcagctaaactcaaccatttgaaacaacacagaacagacgattcaaaa
gtattagcacacctgtccagtactgcattgcaggacaatacctgccacagtggtaatgac
ggtagccaagacggcaataacaacaacaatgactgtggtttgaatcttgagccagtccca
ggttgcaggacaaatcctctgctggctgagagggaagtggttacgacatcgggggactgg
cttcatcactacgatgcatctgtgggaaagacggtttatgtcaacaaagtgactggacat
agccgatacgaagacccacctactgatgaaacgcaagtccgctgtacatctgacgtctcc
aatatggctgttattgtcatctctgaaacggggatggaacccagatgctacccatttcag
attgatctagtgttgcccttcctaccaaagtccaggacagatagagtgattagttcaggg
cttgatgacagaggtaccccacagacagatctgactgccaactatgccaatggtgagagc
tccaactcacttgcgttgttgtactcaaaatggaataatcccgtatttgttcgacctcct
acggttggtgtggacatatcaagtgggcaagctgagggactggctgtcaagatccacaac
atcctgttcccatatcgtttttctaaggccatgatttgctcaatgaaggttattcatcaa
gtggataagaagttccttgcatgtcttatcaatacaagagagggagagcctgcagcactc
aatgaaactgaaggaaaccttctggtgctggtggatcaacacgctgcacatgagagagtt
cgacttgaacatctagttgcagattcctatgaggataacccagatgcaccaggggagaga
cgtctgtgttcatctaccatttttccacctcttgagatcagtgtaacagaagaagaactt
aggctgcttaggtcttgtcaggcacatttgcagtgtttgggcctggaagtgaagttctca
caggcagcagatccacacatttttgtaaggaaggtaccattgtgcttcatggaaaaggag
agtaatgagatcaggcgggggagaccatctgttatcaagcctattgttgaggagtatctt
caagagcagattgagttactccgctcaactggtcgaatgagaggaaccctgcctctcact
gtgctgaaggtgctagcctccctagcatgccatggtgccatcaaattcaacgacagcctg
agtagagatgaatgctacagcttggtggcgtccttgtcctcctgccagctgcccttccag
tgtgcccatggccgtccctccattgctcccttagtagacactctccatttggacaaagat
gaaaaggaattacaaaaacccaacctccaaaagctaagaagaatgtataaggcgtgggaa
ctatatggaaatagataa
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