Etheostoma spectabile (orangethroat darter): 116670082
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Entry
116670082 CDS
T08457
Symbol
sox11
Name
(RefSeq) transcription factor SOX-11
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116670082 (sox11)
Transcription factors [BR:
esp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116670082 (sox11)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116670082
NCBI-ProteinID:
XP_032356279
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Position
20:8356545..8359695
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AA seq
366 aa
AA seq
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MVQHTDNSETDGSMSREATDSEESEFMACSPVAINPDWCKTATGHIKRPMNAFMVWSKIE
RRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPKKK
PKLDSSKSSAPSPEKCGKIAKTPSKKCSKIKTKIGSKSSHGYGEDCVFPILKVTKTVKSE
LTDEDDDDEYEEDYRMGIKTEDEERMRPYNVAKVPASPTLSSSAESEGTSMYEEVRNNNN
RLFYNIKNITKQSTLHAASVSPASSRSVSTSSSSSSSSSSSSSGEDADDLLFDFSLNFAP
SAPGSELGNPNSGNLSLSLVDKDLDSFSEGSLGSHFEFPDYCTPELSEMIAGDWLEANFS
DLVFTY
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcacacagacaacagcgagacggacgggagcatgtccagagaggctaccgat
tcggaggagagtgaatttatggcatgcagccccgtagcgataaacccggactggtgcaag
acagccaccggtcacatcaaaagacccatgaatgcatttatggtgtggtccaaaatcgag
aggagaaagatcatggagcagtcgccggacatgcacaacgcggagatttccaagcgcttg
gggaagaggtggaagatgctcaaggacagtgaaaagattccgtttatcagagaagccgag
aggctgcggctaaaacacatggctgactaccccgactacaagtacagacccaagaaaaaa
ccaaagctcgacagttcaaaatcatcagcaccgtctccggagaagtgcggtaaaattgca
aagactccaagcaagaagtgttcaaagattaagactaagatcggctccaaatcctctcac
ggctacggggaggactgtgtgtttccgatcttaaaagttacaaagactgtgaaaagtgag
ctcaccgatgaggacgatgatgacgagtacgaagaggactaccggatggggattaagacg
gaggacgaggagcgcatgaggccgtacaatgtagccaaagttcccgcgagcccaactttg
agctcctcggccgagtccgagggtacgagcatgtacgaagaagtgcggaacaacaacaac
agactgttttacaatatcaaaaacattaccaagcagagcacattgcacgctgcttctgtc
tcaccagcatcttccaggtcggtctccacatcctcctcctcctcctccagcagcagcagc
tcctcttccggcgaggacgcggacgatttgctgtttgactttagtttaaatttcgccccc
agcgccccaggctcggagctgggcaaccccaattcaggaaacctctccctgtctcttgtg
gataaggacctggactctttcagtgagggcagccttggctctcactttgaattcccagac
tattgcacgccagaactcagtgagatgattgccggggactggctggaggcgaacttttcc
gacctggtctttacatactga
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