Etheostoma spectabile (orangethroat darter): 116670106
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Entry
116670106 CDS
T08457
Name
(RefSeq) transcription activator BRG1-like isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116670106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116670106
03036 Chromosome and associated proteins [BR:
esp03036
]
116670106
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116670106
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
116670106
Chromatin remodeling factors
BAF complex
116670106
PBAF complex
116670106
GBAF(ncBAF) complex
116670106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
116670106
NCBI-ProteinID:
XP_032356316
LinkDB
All DBs
Position
2:16474971..16496708
Genome browser
AA seq
1672 aa
AA seq
DB search
MSTPDPPMGGPPRPGPPSPGAMLGPSPGPSPGSSHSMMGPSPGPPSSGHSQPGPSGYGQD
NMHPPHKPMDSMHEKGMSEESRFSQMKGLSMRQGGHSGMGPPPSPLDQHSQGYHSPLGGS
DHSSPVPSNGPPSGPLMPSSSSSSSGGPGSAPTPLDGPSGDQHTLGPNNRTGPPGSSGPG
PSPGPSLGPSLSTLASGLESGVPPCPGGPGGPTPFNQNQLHQLRAQIMAYKMLARGQPLP
DHLQMAVQGKRPMPGMQQQQPMSSLAPGSGGGPVGGPIGPVPVPGPMGSGYSRAHGMMGP
NMPPPGPSGTPAGMQGQNPNGPPKCWPEGPMVNAAAPSNAPQKLIPPQPTGRPSPAPPSV
PPAASPVMPPQTQSPGQPTQPTPMMPYHAKQNRITPIQKPCGLDPVEILQEREFRLQARI
THRIAELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALDAKA
YKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSITGKMQ
KLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTD
EYVANLTELVRAHKAAQALKEKKKKKKKKKKLENAEGPTPVMGPDGEPLDETSQMSDLPV
KVIHVDSGNILTGLDAPRAGQLETWLEMNPGYEVAPRSDSEDSEEEEEEEEEEEEPQPSA
TQVEEKKKITDPDCEDVSEVDVRHIIENAKQDVDDEYIGAAFARGLQSYYSVAHAVTEKV
EKQSSLLINGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMENKRL
NGPYLIIVPLSTLSNWVYEFDKWAPTVVKVSYKGSPAARRAFVPQLRTGKFNVLLTTYEY
IIKDKQVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKLPELW
ALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKK
EVEAQLPEKVEYVIKCDMSSLQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQL
RKICNHPYMFQQIEESFSEHLGFSGGIVQGPDLYRASGKFEVLDRILPKLRATNHKVLLF
CQMTSLMTIMEDYFAYRSFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLG
LNLQSADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTINSVEEKILAAAKYKL
NVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEVWGQEVCLRINEEDEVPDDETVNQ
MIARSEEEFDQFMRMDLDRRREDARNPRRKPRLMEEDELPTWIMKDDAEVERLTCEEEEE
KMFGRGSRQRKEVDYSDSLTEKQWLKSVFPVQAIEEGTLEEIEEEVRHKKTTRKRKRDRD
LDLPGPSSSSGGRGRGDKDEDGKRQRKRGRPPAEKLSPNPPALTKKMRKIVDAVIKYKDS
ASGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRGHRYRSLGDLERDVMLLFQN
AQTFNLEGSLIYEDSIVLQSVFTSLRQKIEKEEESEGGESEEEEDELEEGSETESRSVKV
KIRLGKKDKGGDRRKGRSRRSGRSRAKPVVSDDDSEDEQEEERSPSATDEES
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaccagatccccccatgggaggcccccctcgcccaggtcctccctcccctggg
gcgatgctgggccccagcccagggccctccccaggctcctctcacagtatgatgggcccc
agccctggccctccatcctcgggacactcccagccagggccctctggatacggccaggac
aacatgcaccctccgcacaaacccatggacagcatgcatgagaagggcatgagtgaggag
agccgcttcagccagatgaagggactatctatgagacagggcgggcatagtggtatgggc
cccccacccagtcctctagaccaacattcgcaaggataccactctccattagggggctct
gaccactccagccctgtcccttcaaatggtcccccctctggaccgctgatgccatcgtcc
tcctcctcctcctctggtggtcccggctctgcgcctacacctttagatggccccagtgga
gatcaacacactcttggtcccaataaccgtactggccctccaggtagctccggcccaggc
cccagccctggacccagccttggccccagtctctccacccttgcatctggccttgaatct
ggagtccctccatgccctggaggtcctggtggccctactccctttaaccagaaccagctt
caccaactcagagcccagatcatggcttataagatgctggcccgtgggcagccactgcca
gaccacctccaaatggctgtccaagggaagaggcccatgccggggatgcagcagcagcag
cccatgtccagtttggctcctggatctggaggtgggccagtaggtggaccaataggacca
gtaccggtgcctgggccaatgggctcaggctacagtcgagctcatggaatgatgggtccc
aacatgcctcctccaggcccatcgggcactccagctgggatgcagggccaaaacccaaat
ggacctcccaagtgctggccagaaggccccatggtgaatgcagcagccccctccaacgca
ccccagaagcttattccccctcagcccactggtcgaccctctcctgcaccgccttcagtt
ccccctgctgcctccccagtaatgcctccacagactcagtcccccggccagccaacacag
cctactcccatgatgccttaccatgccaagcagaaccgcataacccccattcagaaaccc
tgtggactcgacccagtggagatactgcaggagagggagttcaggttacaggctcggatc
actcatcgtattgctgagctggagaacttgccgggctccctggctggggatttacgtacc
aaagctactatagagctcaaagccctccgactgcttaacttccagagacagctgcgtcaa
gaggttgtggtgtgtatgcgtcgcgacacagcgctagagactgcccttgatgccaaggcc
tacaagcgaagcaagcgtcaatctctgcgagaggcgcgcatcacggagaaactggagaaa
cagcagaagattgagcaagagcgcaaacgccggcagaaacatcaggagtacctcaacagc
atcctgcaacacgccaaagacttcaaagagtaccaccgctccatcacaggcaaaatgcag
aaactgaccaaagctgtggccacctaccatgccaatactgaacgggagcagaagaaagag
aatgagcgcattgagaaagagaggatgaggaggctcatggctgaggatgaggagggctat
cgtaaactgattgaccaaaagaaggataagcgcctggcctacctgctgcagcaaactgac
gagtatgtcgccaacctcaccgagttagtcagagctcacaaagctgcgcaggccctcaag
gagaaaaagaagaagaagaagaagaaaaaaaagttggaaaatgccgagggtcctactcct
gtcatgggtcctgatggcgagcctctcgatgagacgagtcagatgagtgacctgcctgtg
aaagtcatccacgttgacagtgggaacatcctgacaggactggacgctccaagagctgga
cagctagagacctggctggagatgaaccctggttatgaggtggctcctcgctcagacagt
gaagacagcgaggaggaggaagaggaggaggaggaagaggaggagcctcagccgtcggct
actcaggtggaggaaaagaagaagattacagaccccgactgtgaagatgtgtcagaggtg
gacgtccgacacatcatcgaaaatgctaaacaggacgtggatgatgaatacatcggtgca
gcgttcgcccgaggcctccagtcttattattctgtggctcacgctgttacagaaaaggtg
gagaaacagtccagtttgctaataaatggacaactcaaacaatatcagattaaaggtctg
gagtggctggtttccctctacaataataatctgaatgggatcttggcagatgagatgggt
ctgggaaaaaccattcagactatcgccctcatcacatacctcatggagaacaaacgactc
aatggtccctacctcatcattgtacccctctcaactctttctaactgggtgtatgagttt
gacaagtgggcaccgacagttgtcaaagtgtcctacaaggggtctcctgctgccaggaga
gcctttgtcccccagctgcgcactggcaagtttaatgttttactcaccacttacgagtac
atcatcaaggataaacaagtactggccaagattcgttggaaatacatgatcgtggatgag
ggccaccgtatgaagaaccaccactgtaagctgacccaggtcctaaacactcactacctg
gccccacggcgagtcctgctgacaggaacgccgctgcagaacaaactacctgagctctgg
gcgttattaaacttcctcctgcccaccatcttcaagagttgcagcacctttgagcagtgg
ttcaacgcccctttcgctatgactggagagaaggtggaccttaatgaagaggagaccatc
ttgataatccgccgtctccacaaagtacttcgtcccttcctgttacgcagattaaagaag
gaagtggaggcacagcttccagagaaggtggaatacgtgatcaagtgtgacatgtcatct
cttcagagggtgctgtacaggcacatgcaggccaagggggtcctgctcactgatggatca
gagaaggacaagaagggtaaaggtggcacaaagacactgatgaacaccatcatgcagctg
aggaagatctgtaaccacccttacatgttccagcagatagaggaatctttctctgaacat
ttaggattctctggtgggatagtccagggtccagacctgtatcgggcatcaggaaagttt
gaggtgttggatcgaatcctgccaaagctgagagccacaaaccacaaagtactgctcttc
tgtcagatgacctccctcatgaccatcatggaggactactttgcctatcgcagcttcaag
tatctgcgtctggatggcactacaaaagctgaagatagaggaatgttactgaaaacattc
aatgaaccaggatcagagtactttatcttcctcctgagcacgagagctggaggcctcggc
ctaaatttgcagtctgccgacactgtggttatttttgactctgactggaacccacatcag
gacctgcaggctcaggacagagcccaccgtatcggtcaacagaacgaggtgcgtgtgctg
cgtctttgcacaatcaacagtgttgaagagaaaatcctggctgctgccaagtacaaactt
aacgtggaccaaaaggtcatacaggctggcatgtttgatcaaaagtcttccagccacgag
cgcagggccttcctgcaggccatcctggaacacgaggagcaggacgaggtctggggtcag
gaagtctgtctacgcattaatgaggaagatgaggtgccagatgatgagacggtcaaccag
atgattgccaggagtgaggaggagtttgatcagttcatgcgtatggatctagacaggcgt
cgcgaggatgcccgtaacccacggcgaaaacctcgtctgatggaggaggacgagctgccc
acttggatcatgaaggatgacgctgaggttgaacggctgacctgcgaggaggaagaggag
aaaatgtttggacgaggttcacgacagcggaaggaggtggattacagcgattcactgacg
gagaagcagtggctcaagtctgtgtttcccgtgcaggcgatagaggagggtacactagag
gagatcgaggaagaggtacgtcacaaaaagacgacccgcaagaggaagcgtgaccgcgac
ctagatctccctggtccctcgtcttcctctggaggacgaggtcgaggggacaaagatgaa
gatgggaagaggcagaggaagagggggcgaccacctgctgagaaactctcccccaacccc
cctgccctcacaaagaagatgaggaagattgtggacgctgtcatcaagtataaagacagc
gccagtgggcgtcagctaagcgaggtgttcatccagctgccatctcgaaaagagctgccg
gagtactacgaattgatccgcaagcctgtggacttcaggaagatcaaggagaggattcga
ggtcatcgttatcgcagtctgggtgacctggagagggacgtcatgctgctcttccaaaat
gctcagaccttcaacctggagggatcactgatatatgaagactccattgtcctccagtca
gtgtttaccagcttgaggcaaaagatcgagaaggaggaggaaagtgaaggaggggagagt
gaggaagaggaagacgagctggaggaaggatcagagactgaatctcgctcagtgaaagtg
aagatccgtctgggaaagaaggataaaggtggagatcgacggaagggtcgcagcagacga
tcaggacgcagtagagccaaacctgttgttagtgacgacgactctgaggatgagcaggaa
gaggagcgttcccccagtgccactgacgaggagtcctga
DBGET
integrated database retrieval system
