Etheostoma spectabile (orangethroat darter): 116670106
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Entry
116670106 CDS
T08457
Name
(RefSeq) transcription activator BRG1-like isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116670106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116670106
03036 Chromosome and associated proteins [BR:
esp03036
]
116670106
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116670106
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
116670106
Chromatin remodeling factors
BAF complex
116670106
PBAF complex
116670106
GBAF(ncBAF) complex
116670106
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
QLQ
BRK
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
116670106
NCBI-ProteinID:
XP_032356316
LinkDB
All DBs
Position
2:16474971..16496708
Genome browser
AA seq
1672 aa
AA seq
DB search
MSTPDPPMGGPPRPGPPSPGAMLGPSPGPSPGSSHSMMGPSPGPPSSGHSQPGPSGYGQD
NMHPPHKPMDSMHEKGMSEESRFSQMKGLSMRQGGHSGMGPPPSPLDQHSQGYHSPLGGS
DHSSPVPSNGPPSGPLMPSSSSSSSGGPGSAPTPLDGPSGDQHTLGPNNRTGPPGSSGPG
PSPGPSLGPSLSTLASGLESGVPPCPGGPGGPTPFNQNQLHQLRAQIMAYKMLARGQPLP
DHLQMAVQGKRPMPGMQQQQPMSSLAPGSGGGPVGGPIGPVPVPGPMGSGYSRAHGMMGP
NMPPPGPSGTPAGMQGQNPNGPPKCWPEGPMVNAAAPSNAPQKLIPPQPTGRPSPAPPSV
PPAASPVMPPQTQSPGQPTQPTPMMPYHAKQNRITPIQKPCGLDPVEILQEREFRLQARI
THRIAELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALDAKA
YKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSITGKMQ
KLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTD
EYVANLTELVRAHKAAQALKEKKKKKKKKKKLENAEGPTPVMGPDGEPLDETSQMSDLPV
KVIHVDSGNILTGLDAPRAGQLETWLEMNPGYEVAPRSDSEDSEEEEEEEEEEEEPQPSA
TQVEEKKKITDPDCEDVSEVDVRHIIENAKQDVDDEYIGAAFARGLQSYYSVAHAVTEKV
EKQSSLLINGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMENKRL
NGPYLIIVPLSTLSNWVYEFDKWAPTVVKVSYKGSPAARRAFVPQLRTGKFNVLLTTYEY
IIKDKQVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKLPELW
ALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKK
EVEAQLPEKVEYVIKCDMSSLQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQL
RKICNHPYMFQQIEESFSEHLGFSGGIVQGPDLYRASGKFEVLDRILPKLRATNHKVLLF
CQMTSLMTIMEDYFAYRSFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLG
LNLQSADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTINSVEEKILAAAKYKL
NVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEVWGQEVCLRINEEDEVPDDETVNQ
MIARSEEEFDQFMRMDLDRRREDARNPRRKPRLMEEDELPTWIMKDDAEVERLTCEEEEE
KMFGRGSRQRKEVDYSDSLTEKQWLKSVFPVQAIEEGTLEEIEEEVRHKKTTRKRKRDRD
LDLPGPSSSSGGRGRGDKDEDGKRQRKRGRPPAEKLSPNPPALTKKMRKIVDAVIKYKDS
ASGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRGHRYRSLGDLERDVMLLFQN
AQTFNLEGSLIYEDSIVLQSVFTSLRQKIEKEEESEGGESEEEEDELEEGSETESRSVKV
KIRLGKKDKGGDRRKGRSRRSGRSRAKPVVSDDDSEDEQEEERSPSATDEES
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaccagatccccccatgggaggcccccctcgcccaggtcctccctcccctggg
gcgatgctgggccccagcccagggccctccccaggctcctctcacagtatgatgggcccc
agccctggccctccatcctcgggacactcccagccagggccctctggatacggccaggac
aacatgcaccctccgcacaaacccatggacagcatgcatgagaagggcatgagtgaggag
agccgcttcagccagatgaagggactatctatgagacagggcgggcatagtggtatgggc
cccccacccagtcctctagaccaacattcgcaaggataccactctccattagggggctct
gaccactccagccctgtcccttcaaatggtcccccctctggaccgctgatgccatcgtcc
tcctcctcctcctctggtggtcccggctctgcgcctacacctttagatggccccagtgga
gatcaacacactcttggtcccaataaccgtactggccctccaggtagctccggcccaggc
cccagccctggacccagccttggccccagtctctccacccttgcatctggccttgaatct
ggagtccctccatgccctggaggtcctggtggccctactccctttaaccagaaccagctt
caccaactcagagcccagatcatggcttataagatgctggcccgtgggcagccactgcca
gaccacctccaaatggctgtccaagggaagaggcccatgccggggatgcagcagcagcag
cccatgtccagtttggctcctggatctggaggtgggccagtaggtggaccaataggacca
gtaccggtgcctgggccaatgggctcaggctacagtcgagctcatggaatgatgggtccc
aacatgcctcctccaggcccatcgggcactccagctgggatgcagggccaaaacccaaat
ggacctcccaagtgctggccagaaggccccatggtgaatgcagcagccccctccaacgca
ccccagaagcttattccccctcagcccactggtcgaccctctcctgcaccgccttcagtt
ccccctgctgcctccccagtaatgcctccacagactcagtcccccggccagccaacacag
cctactcccatgatgccttaccatgccaagcagaaccgcataacccccattcagaaaccc
tgtggactcgacccagtggagatactgcaggagagggagttcaggttacaggctcggatc
actcatcgtattgctgagctggagaacttgccgggctccctggctggggatttacgtacc
aaagctactatagagctcaaagccctccgactgcttaacttccagagacagctgcgtcaa
gaggttgtggtgtgtatgcgtcgcgacacagcgctagagactgcccttgatgccaaggcc
tacaagcgaagcaagcgtcaatctctgcgagaggcgcgcatcacggagaaactggagaaa
cagcagaagattgagcaagagcgcaaacgccggcagaaacatcaggagtacctcaacagc
atcctgcaacacgccaaagacttcaaagagtaccaccgctccatcacaggcaaaatgcag
aaactgaccaaagctgtggccacctaccatgccaatactgaacgggagcagaagaaagag
aatgagcgcattgagaaagagaggatgaggaggctcatggctgaggatgaggagggctat
cgtaaactgattgaccaaaagaaggataagcgcctggcctacctgctgcagcaaactgac
gagtatgtcgccaacctcaccgagttagtcagagctcacaaagctgcgcaggccctcaag
gagaaaaagaagaagaagaagaagaaaaaaaagttggaaaatgccgagggtcctactcct
gtcatgggtcctgatggcgagcctctcgatgagacgagtcagatgagtgacctgcctgtg
aaagtcatccacgttgacagtgggaacatcctgacaggactggacgctccaagagctgga
cagctagagacctggctggagatgaaccctggttatgaggtggctcctcgctcagacagt
gaagacagcgaggaggaggaagaggaggaggaggaagaggaggagcctcagccgtcggct
actcaggtggaggaaaagaagaagattacagaccccgactgtgaagatgtgtcagaggtg
gacgtccgacacatcatcgaaaatgctaaacaggacgtggatgatgaatacatcggtgca
gcgttcgcccgaggcctccagtcttattattctgtggctcacgctgttacagaaaaggtg
gagaaacagtccagtttgctaataaatggacaactcaaacaatatcagattaaaggtctg
gagtggctggtttccctctacaataataatctgaatgggatcttggcagatgagatgggt
ctgggaaaaaccattcagactatcgccctcatcacatacctcatggagaacaaacgactc
aatggtccctacctcatcattgtacccctctcaactctttctaactgggtgtatgagttt
gacaagtgggcaccgacagttgtcaaagtgtcctacaaggggtctcctgctgccaggaga
gcctttgtcccccagctgcgcactggcaagtttaatgttttactcaccacttacgagtac
atcatcaaggataaacaagtactggccaagattcgttggaaatacatgatcgtggatgag
ggccaccgtatgaagaaccaccactgtaagctgacccaggtcctaaacactcactacctg
gccccacggcgagtcctgctgacaggaacgccgctgcagaacaaactacctgagctctgg
gcgttattaaacttcctcctgcccaccatcttcaagagttgcagcacctttgagcagtgg
ttcaacgcccctttcgctatgactggagagaaggtggaccttaatgaagaggagaccatc
ttgataatccgccgtctccacaaagtacttcgtcccttcctgttacgcagattaaagaag
gaagtggaggcacagcttccagagaaggtggaatacgtgatcaagtgtgacatgtcatct
cttcagagggtgctgtacaggcacatgcaggccaagggggtcctgctcactgatggatca
gagaaggacaagaagggtaaaggtggcacaaagacactgatgaacaccatcatgcagctg
aggaagatctgtaaccacccttacatgttccagcagatagaggaatctttctctgaacat
ttaggattctctggtgggatagtccagggtccagacctgtatcgggcatcaggaaagttt
gaggtgttggatcgaatcctgccaaagctgagagccacaaaccacaaagtactgctcttc
tgtcagatgacctccctcatgaccatcatggaggactactttgcctatcgcagcttcaag
tatctgcgtctggatggcactacaaaagctgaagatagaggaatgttactgaaaacattc
aatgaaccaggatcagagtactttatcttcctcctgagcacgagagctggaggcctcggc
ctaaatttgcagtctgccgacactgtggttatttttgactctgactggaacccacatcag
gacctgcaggctcaggacagagcccaccgtatcggtcaacagaacgaggtgcgtgtgctg
cgtctttgcacaatcaacagtgttgaagagaaaatcctggctgctgccaagtacaaactt
aacgtggaccaaaaggtcatacaggctggcatgtttgatcaaaagtcttccagccacgag
cgcagggccttcctgcaggccatcctggaacacgaggagcaggacgaggtctggggtcag
gaagtctgtctacgcattaatgaggaagatgaggtgccagatgatgagacggtcaaccag
atgattgccaggagtgaggaggagtttgatcagttcatgcgtatggatctagacaggcgt
cgcgaggatgcccgtaacccacggcgaaaacctcgtctgatggaggaggacgagctgccc
acttggatcatgaaggatgacgctgaggttgaacggctgacctgcgaggaggaagaggag
aaaatgtttggacgaggttcacgacagcggaaggaggtggattacagcgattcactgacg
gagaagcagtggctcaagtctgtgtttcccgtgcaggcgatagaggagggtacactagag
gagatcgaggaagaggtacgtcacaaaaagacgacccgcaagaggaagcgtgaccgcgac
ctagatctccctggtccctcgtcttcctctggaggacgaggtcgaggggacaaagatgaa
gatgggaagaggcagaggaagagggggcgaccacctgctgagaaactctcccccaacccc
cctgccctcacaaagaagatgaggaagattgtggacgctgtcatcaagtataaagacagc
gccagtgggcgtcagctaagcgaggtgttcatccagctgccatctcgaaaagagctgccg
gagtactacgaattgatccgcaagcctgtggacttcaggaagatcaaggagaggattcga
ggtcatcgttatcgcagtctgggtgacctggagagggacgtcatgctgctcttccaaaat
gctcagaccttcaacctggagggatcactgatatatgaagactccattgtcctccagtca
gtgtttaccagcttgaggcaaaagatcgagaaggaggaggaaagtgaaggaggggagagt
gaggaagaggaagacgagctggaggaaggatcagagactgaatctcgctcagtgaaagtg
aagatccgtctgggaaagaaggataaaggtggagatcgacggaagggtcgcagcagacga
tcaggacgcagtagagccaaacctgttgttagtgacgacgactctgaggatgagcaggaa
gaggagcgttcccccagtgccactgacgaggagtcctga
DBGET
integrated database retrieval system
