Etheostoma spectabile (orangethroat darter): 116670145
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Entry
116670145 CDS
T08457
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B-like isoform X1
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04020
Calcium signaling pathway
esp04080
Neuroactive ligand-receptor interaction
esp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116670145
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116670145
04082 Neuroactive ligand signaling
116670145
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116670145
Ion channels [BR:
esp04040
]
Ligand-gated channels
Glutamate (ionotropic)
116670145
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
116670145
NCBI-ProteinID:
XP_032356414
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Position
20:complement(3298531..3412039)
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AA seq
1333 aa
AA seq
DB search
MVSLSGLWTYCLAPGRPHLLFLSARPLLLLLLLAAFSSPESCFPHPQPCHILSRIGHTVR
LGALLPTRQPARIQNALNRALASLRHQSGGADSSTTASQTPPLLPYNLSLEMVARSPAGG
DPESLSRSTCQDLVVRGVSAVLAFPRSREELIQVEFLSSFLEIPFISILEDTEPLVTKNR
FHLQMSARVPPSTLGSLLLAVLQGREGDRDRESRGESSWGGAAVLCPGWEEGGEGLLSHL
QMHSGSNWHLWDIINMTLISGGTDRRGETREEKKEDQREDEALKILSTRFLRSPSPISSV
LLLGSDPECLSSILRAAQRLAPLLPALQWIMGYPLSPDSLHTLGGPLGLLAYGEVGRKPI
SFYIRDALQLIGRAVTAATMVSPDLALNPNVVNCYDKPNQQKLPSSGQYLARFLSNTSFT
GATGLIQVDAGLSRVLTSQLFHVWSLKRGALGQPAWVTVGQWTRGRLELEGGILGLVGGF
GSSQGQGLGAGVRGGDGQGDSNAGGRWRPGESVEGHRLRVVTLVEHPFVFTREVDEDGLC
PAGQLCLDPRTNRSDLIQSIFNQLHNPNTSVSDWEGNELPEDLRKCCYGYCIDLLEKLAE
DMGFTFDLYIVGDGKYGALSGTGRWTGLVGDLRSGTADMAVTSFSINSARSRVIDFTSPF
YSTSLGILVRSRDTAAPIGAFMWPLHWSMWVGIFVTLHLTALFLTLYEWNSPFGMTPHGR
NRLRVFSYSSALNLCYAILFGRTVATKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVM
VGEKTFEEVSGIHDDKLHHPSMGFRFGTVRESSAEDYMKKSFPEMHEYMRRFNQPTTPEG
VHMLKTDPPALDAFIMDKALLDFEVSIDAECKLLTVGKPFAIEGYGIGLPQGSPLTRNVS
EFVSRYKSDGFMDMLHDKWYKVVPCGKRVFAVTETLQMGIQHFSGLFVLLCMGVGGALLT
LAGEHTFYHLVIPRLRRTHTLQYWLHTSQKIHRALHTTYEDVGKELTDLDQNPSSCISEN
CTLHRKQHQPPPPSPPTSLPASTTAGDTCNSSPSHEPKEKRVHFDLETLHSYRLRTHTAS
VRGRPGMVGRPGLGLGGWGLGSLTSPPQISLHANGGPVCSLASTGLVLTPLGSRAAQTSL
WEGELHDLQGKIETFRTQLREALARRAEIQSSLERERSGLVRRDTSLERERDRQRIQTIN
TDRSSSTQPKLPERDRTSQLQTLNNQQTGRANQSGGPGTLEHRRSSQLNTVNSLDRGRAN
QLRSVNTLTGERTVQSRTCTSLERSQVNQPGAGNITVQSRNTSSLDRQMANLSRTLNTLE
STKANQSSLSSGT
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctctctctggactctggacctactgcctcgcccccgggagacctcatctcctc
ttcctctccgccagaccgctcctgctgcttcttttactggccgccttctcctccccggag
tcctgcttcccgcaccctcagccttgccacatcctctcccggataggacacaccgtgcgt
ctcggtgcgctcttgccgacccgccagccggcacggatacaaaacgcgctcaaccgcgcc
ctggcgagcctccggcaccagagcggaggggcagactcctccacgacagcctcccaaaca
cctcctctgctgccctacaacctgagtctggagatggtggcgcgatcgcccgcaggtggg
gacccagagtcgttgtcccgtagcacctgccaggacctggtggtcaggggggtgtccgct
gtgcttgcatttccccgctccagggaagagctgatccaggtggagtttctctcctctttc
ctggagatccccttcatctccatcctagaggacacagagccccttgtgactaagaaccga
ttccacctgcagatgtcagcccgtgtgcctccatcaaccttaggcagcctgctgctggcg
gtcctgcaggggagagagggggacagggacagagaaagccggggggaaagcagctgggga
ggagcagctgtgctctgccccgggtgggaggaagggggtgaagggttgctatctcacctg
cagatgcacagcggttctaactggcatttgtgggatatcatcaacatgaccctcatctcc
gggggcacagatagaaggggggagaccagggaggaaaagaaagaggatcagagggaagat
gaggctttgaagatcctctccacccgtttcctgcgctccccctctcctatctcctccgtt
ctcctcctgggatctgaccccgagtgcctctcctccatcctgcgggccgctcagcgcctc
gctccattactaccagcactgcagtggatcatgggatatcccttgtctccagattcgctc
cacactctgggaggtccccttggactgttagcctacggggaggtgggccgcaagccgatc
agcttctacatccgtgatgctttgcagttgattggtcgcgcggtcactgcggcgaccatg
gtgagcccggacctggcgctgaatcccaacgtggtgaattgttacgacaaaccaaaccaa
caaaagctgccctcctcaggacaatatctggccaggttcctctccaacacttccttcacc
ggggccacaggcctgatccaggtggatgccggcctctctcgggtcctcacctcccagctg
ttccatgtgtggagcctgaagaggggtgctcttggccagccggcctgggtgactgtaggc
cagtggacccgaggccggctggagctagaaggggggattctaggattggtgggggggttc
gggagcagccagggacaaggtcttggagcaggagtgaggggaggggacggccagggggac
agtaacgctggagggcgctggaggccgggagaatccgtcgagggacaccgcctgcgggtg
gtgacactggtggaacacccgtttgtcttcacgcgggaggtggatgaggatggattgtgt
ccagctggtcagctctgtctggatcccagaaccaaccggtccgacttaatccagagcatc
ttcaaccagctgcacaacccaaacacttcagtgtcagactgggaggggaacgaactaccg
gaggacctgaggaagtgctgctacgggtactgcattgacttgttggagaaacttgcagag
gacatgggtttcacctttgacctttacattgtcggagacgggaagtacggagcgttgagc
gggacagggcgctggacggggctggtcggggacctgcggagcggaaccgctgacatggct
gtcacctctttctccatcaactctgccaggagcagggtcatcgacttcacctcgcccttc
tactccaccagcctgggcattctggttcgtagccgggacactgcagcccccatcggagcc
ttcatgtggcctctccactggtccatgtgggtgggtatttttgtcacgctccatctcacc
gcgctcttcctcaccttgtacgagtggaacagccccttcggcatgacaccccatggcagg
aacaggctgcgtgtgttctcctactcctccgccctcaatctctgctacgccatactgttt
ggacgtactgtcgccaccaagactcctaaatgctggaccgggcgcttcctgatgaacctt
tgggccatcttctgcctactggtgctgtctagctacaccgccaacctagctgcggtcatg
gtcggggagaagaccttcgaggaggtctcaggaattcatgacgacaagctgcaccatcca
tccatgggcttccgttttgggacggtgagggagagcagcgctgaggattacatgaagaag
agcttcccagagatgcacgaatacatgagacgcttcaaccagcccaccaccccagagggc
gtacatatgttgaagacagatcctcctgctctggatgcgttcatcatggacaaagccctg
ttggactttgaggtctccattgacgcggagtgcaaactactcactgtggggaagcctttc
gctattgaaggctacggtataggcctgccccagggctctcctctaacccgtaatgtgtca
gagttcgtgagtcgctacaagtctgacggcttcatggacatgctacatgacaaatggtat
aaggttgtgccctgcgggaagcgagtctttgcagtcactgagactctacagatggggatc
cagcatttttccgggctgtttgtgctgctgtgtatgggggtgggtggagccttgctgacc
ttggcaggtgaacacaccttctatcacctggtcatccctcgcctccggcgcacgcacacg
ctgcagtactggctgcacaccagccagaaaatccaccgagccctccacaccacgtatgag
gatgttggaaaggagctgacagacctcgaccaaaacccctcctcttgtatctcagagaac
tgcaccctacacaggaaacagcatcagcctcctcccccatctcctcccacgtccctccct
gcttccacaacagctggagacacctgcaactcctcaccatcccacgagcccaaggagaaa
cgcgtgcactttgacctggaaaccctccacagctaccgtctgcgcacacacaccgcctcg
gtgcgcggcaggcctggtatggtcggccgtcctgggctcgggttaggagggtgggggctg
ggcagtcttacctcccctccacaaattagcctccatgctaacgggggccccgtctgttca
ctggcttccacaggcttggtgctcactcccctgggcagcagggccgctcagaccagccta
tgggagggggagctccacgacctgcaggggaagatcgagacgttccgcacccagctgaga
gaggctctggccaggagagcagagatccagagcagcctggagagagagaggagcggactt
gtacgcagggataccagtctggagagggaaagggacagacagaggatacagactattaac
acagacagaagtagctccactcagcccaagctccctgagagagacaggaccagccaactg
caaaccctgaataatcaacaaacagggagggctaaccaatcaggcggtcctgggaccctg
gagcaccggagaagcagccaattaaacacagtgaacagtttggacagagggagagccaac
cagttacggtctgttaatactttgacgggagaaaggactgtccaatcacgcacttgcacc
agtttggagcgaagtcaagtcaaccagccaggggctggaaacataactgtccaatcacgg
aacacttctagcttggacagacagatggctaacctatcacgcactctgaacactttggag
agtacaaaagccaaccaatcaagtttaagcagtggaacttga
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