Etheostoma spectabile (orangethroat darter): 116670188
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Entry
116670188 CDS
T08457
Symbol
lrfn5
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
esp04990
]
116670188 (lrfn5)
Domain-containing proteins not elsewhere classified [BR:
esp04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
116670188 (lrfn5)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
Ig_3
I-set
LRR_5
LRR_4
LRR_1
ig
Ig_2
LRR_9
fn3
C2-set_2
Ig_DSCAM-DSCAML_C
C2-set_3
Ig_5
Rop
Motif
Other DBs
NCBI-GeneID:
116670188
NCBI-ProteinID:
XP_032356488
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Position
20:complement(15372202..15500145)
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AA seq
867 aa
AA seq
DB search
MERLWLCVMLAVAMAVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRHTVELRLA
DNFVTSVKRKDFANMTRLVDLTLSRNTISYITPHAFADLENLRALHLNSNRLTRIGNDTF
CGMSKLHHLILNNNQLMLIHQGAFNDLLALEELDLSYNNLDTIPWEAIQKMISLHTLSLD
HNMLDFIPEGTFSLLQKLNRLDVTSNKLLKLPPDPLFQRAQVLATSGIMTSTSFALSFGG
NPLHCNCELLWLRRLNREDDLETCASPQHLSGRYFWSIPEEEFLCEPPLITRYSHEMRVL
EGQRVILRCKARGDPEPAIHWISPEGKLVSNSSRTLVYNNGTLDILISTVKDTGSFSCIS
SNPAGEAHQTIDLVIIKLPHISNNTNNIQEPDPGSSDISTSTRGGANGSNVTGDVKGGVD
KRVVTAEATSSTALIKFNFQRNIPGIRMFQIQYNGSQDDSLVYRMIPPSSKNFLVNNLAA
GTQYDLCVLAIYDDVITSLTATRVVGCVQFNTESEYMRCHFMQSQFLGGTMIIIIGGIIV
ASVLVFIIILMIRYKVCNPGEGGKGVSLSMTNVHSQTNGQQSQGCTVTPSSSKHGSIGLD
DLSGGTKKRSGAGGGRGGGKDTMTQSSDSSLPDCSTTTSVLSQPWAAKSPTAGAEEWEKT
GEERAQADNLSPTGPGGSLTKPKRKPTPSKPGPACSNTSATPENLPSPRPPSSSFSTASS
ALLPSTPLENLNTNRNNSTSLNQPPPPFVPSFFSSPLATPSPVPSIRFRETPILRRAPRA
GTSSSAKYQTLPVEEAGRSRGRRRYSLSEGGSKTHSSHQGAGGAPKIGRIMRDKRSQSMS
GILLPKDGDGDSDKGRCDSDWILESTV
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggagaggctgtggctgtgtgtgatgctggcagtcgccatggcagtgcgggcacagatc
tgcccgaagcgctgcgtatgtcagatcctgtcacccaacctggcgaccctctgcgccaag
aaaggtctactgtttgtaccgccgaacattgataggcatacagtggaactacgactggct
gacaactttgtcacaagtgtgaagaggaaagattttgcaaatatgacacggctggtggac
ctaacgttatccagaaacaccatctcctacatcacacctcatgcctttgccgatttggaa
aaccttagagctctacacctcaacagtaaccggctgacgaggataggaaatgacacattt
tgcgggatgtcgaagcttcaccacctgattttgaacaacaatcagctgatgctgatccac
caaggagcattcaacgacctgctggcactggaagaattggacctcagttacaataacctg
gacactattccctgggaggccatccagaaaatgattagcctccatacgttgagtttagac
cacaatatgctggacttcattccagagggaacattttctctgctacagaaactcaaccgg
ctggacgtcacctctaataaactcctaaagctgccgccggacccactttttcaacgagct
caggtcctggccacatcagggatcatgacctccacttcttttgcattatcattcggtgga
aaccctctccactgcaactgtgagttactgtggctgcgaaggctaaacagagaggacgac
ctggagacatgcgcttcaccccaacacctctctggccgatacttctggtccatccctgag
gaagagtttctctgcgaacctccactcatcaccagatactcccatgagatgcgggtgctt
gaagggcagagagttatactcaggtgtaaggcaagaggtgacccagagccagcaatccac
tggatctctcccgagggcaaactggtgtctaactcctccagaacgttggtgtacaacaac
gggaccctggacatcctcattagtacagtgaaagacactggctccttcagctgcatctcc
tccaaccctgccggtgaagcccaccaaacaatagacctggttattataaaactcccccac
atctccaacaacaccaacaacatccaggagcccgaccccggatcgtcagacatttccacg
tcaacccgaggcggagctaacgggagcaacgtgacgggtgacgttaaaggtggggtggat
aagagggttgtaacggccgaggccacgtcatcgacagcgctgatcaagttcaacttccag
agaaatattccaggcataaggatgttccagatacagtacaatgggagccaagatgactcg
ctggtttacagaatgatccccccatcaagcaaaaacttcctggtcaacaacctggcagca
gggacccagtacgacctctgcgtgctggccatttacgatgatgtcatcacctctctgaca
gcaacacgtgtggtcggctgtgtgcagttcaacaccgagtctgagtacatgaggtgtcat
tttatgcagtctcagttcctcggcgggactatgattatcatcatcggagggataatagtg
gcttcggtgctcgttttcatcatcatcctgatgatacggtacaaggtgtgtaaccctggt
gaggggggtaaaggtgtttcattgtcgatgaccaacgttcactcacagaccaatgggcaa
cagtcacagggatgcactgtgactccaagctcctctaaacacggctcaatcggattagac
gacctttcaggaggcacaaagaaaaggagtggagcaggaggaggaagaggagggggtaag
gatacgatgactcagtcgtccgactcatccctgcctgattgctccacgactacgtcagtt
ctcagccagccttgggcagccaaaagcccaacagctggagccgaggaatgggagaaaacg
ggtgaagagagagctcaagctgacaacttgtcgcccaccggccccggaggttcactgacc
aagccaaagcggaagcccactccaagtaagccaggcccggcttgctccaacacctcggct
actcctgaaaacctcccctcccctcgtcctccttcctcctccttctctaccgcctcctct
gctctcctcccctccacccctctggagaatctcaacactaaccgcaacaactccacctct
cttaaccaacccccacctccctttgtcccttcctttttctccagccctctcgccaccccg
agccccgtcccctccatccgttttagagagacgcccatcctgcgcagggctcctcgcgca
ggcacctcatcctccgccaagtaccagactctccctgtggaggaggcagggaggagcagg
gggaggaggaggtactcgcttagtgaaggaggttcaaagactcactcgtcacatcaggga
gcaggaggagcgcccaaaatagggcgcataatgcgggacaaaaggagccaatcaatgagc
gggatactactcccaaaagatggggatggagactcagacaagggccggtgcgattcggac
tggatcttagaaagcacagtttga
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