Etheostoma spectabile (orangethroat darter): 116670199
Help
Entry
116670199 CDS
T08457
Symbol
sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116670199 (sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esp03041
]
116670199 (sart1)
04121 Ubiquitin system [BR:
esp04121
]
116670199 (sart1)
Spliceosome [BR:
esp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
116670199 (sart1)
Complex C
U4/U6.U5 tri-SnRNP specific factors
116670199 (sart1)
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116670199 (sart1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
Motif
Other DBs
NCBI-GeneID:
116670199
NCBI-ProteinID:
XP_032356511
LinkDB
All DBs
Position
2:7906026..7909069
Genome browser
AA seq
775 aa
AA seq
DB search
MGSSKKRKEKSRDKDAEERKDRHKKHRHKDRERGAADRDGTRDKEKRKRSRSRERSGRES
RSKGERSTGEPRVKKEKVDLGYDESNTEVQPQSASGDASLSIEETNKLRAKLGLKPLELN
ENKKELGTKEEPMVAETINPVLIKKQKDMREKLAAMKEKRIQNKKLGKVKTLAEEDWLDD
AAAWVEKSRLMAKEKEMAEKRAKLLEEMDEEFGVSSLIEEEFAQSKKDAYTSQDLKGLKV
QHKVDSFNEGQTVILTLQDKGVLEEEEDVLVNVGLVDKEKAEKNVELKKKKPDYKPYEEE
ESVDDMVTFKAHSVLSKYDEEIEGEKKKSFRLKTGGFADGEREREVQAMREALRNQAQSL
DMPALTIASEYYTLKEMVGFKKTKRRVRKIRKKEKQPAVDELLVDDTRSTDFGSRTRGRG
RRQVEEEGEEAKEEEQESKLPHAIPQMSDDVRMAEMDISDDEDFTPPEPTAIEEDEAEQE
LQKQLEKQRKLKQKQLLKDSGEKVAEQIKDLIEGNNDNDPERKNNIVFNATSEFCRTLGD
IPTYGLSGNREDQEDIMDFEEEAEKDDAGGSDSEMDENVGWSTVNLDEEQKQPDFSTASA
TILDEEPIVKSGLAAALLLCKNKGLLDTEMQKVARVRATKGALPNDNYCIEDKMGFDDKY
SRREEYRGFTQDFKDKDGYKPDVKIEYVDESGRRLTPKEAFRQLSHRFHGKGSGKMKTER
RMKKLEEEALLKKMSSSDTPLGTVALLQEKQKSQKTPYIVLSGSGKSMNANNITK
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgggatcctccaagaaacgcaaggaaaaaagccgcgacaaggacgcagaagagcggaag
gaccgacataagaaacatcgccacaaggaccgagaaagaggtgctgcagaccgcgatggg
actcgggataaagagaagcggaaacgctccaggtctcgggagagaagcggacgtgaaagc
cgcagcaaaggcgaaaggagtaccggggagccacgagtgaagaaggagaaagttgatctt
ggatatgacgaaagcaatacagaagtgcagcctcagtctgcaagcggagacgcatctctc
agcattgaggaaacaaacaaactcagagccaagctgggtctgaagcctctggaattaaat
gagaacaagaaggagcttggcactaaagaagaacccatggtggctgagaccatcaacccc
gttctcatcaaaaagcagaaagatatgagagaaaagcttgcagctatgaaagaaaaacgc
atccagaataagaaactgggaaaagtcaagaccctagcagaggaggactggctggatgat
gcagctgcttgggttgagaaaagcagactgatggcaaaagaaaaagaaatggcagagaaa
agagccaaacttctggaagagatggatgaggagtttggtgtgagcagtctgatagaggag
gagtttgcacaaagcaagaaggatgcctacacatctcaagatcttaagggactcaaagtg
cagcacaaggtggattccttcaacgagggccagactgtcatcctgaccctacaagacaaa
ggtgtgcttgaagaggaggaggatgtgcttgtaaatgtgggactggtggacaaggaaaaa
gcagaaaagaatgtggagttaaaaaagaaaaagccagattataagccctatgaagaagaa
gagagtgtggatgacatggtgacgtttaaagcccactctgtactgtcaaagtatgatgag
gaaatcgagggtgaaaagaaaaagagtttccgtttgaagacggggggctttgcggacggg
gagcgagagcgggaggttcaggccatgagagaggctctacgaaaccaggcccagtcgttg
gacatgcctgctctcactatcgcctcagagtattacacactcaaggaaatggtgggcttt
aaaaagacaaaacggcgtgtgaggaagatcaggaagaaggagaagcagccagctgttgat
gagcttcttgtagatgacactcgcagcactgattttggctctaggacacgcggtcgaggc
cgcagacaagttgaggaagagggtgaggaagcaaaggaggaggagcaggagagcaaattg
ccacacgctatcccccaaatgtcagatgatgttaggatggcagaaatggacataagtgac
gatgaagactttacacctcctgaaccaactgcaattgaggaggatgaggcagagcaggag
ctacagaaacaactggagaagcagaggaagctgaagcagaagcagcttctcaaagactct
ggagagaaggtggcagagcagattaaagatcttattgaaggcaacaatgacaatgatccc
gagaggaagaacaacattgttttcaacgccacctcagagttttgcagaactctgggtgat
attccaacatatggactgtcaggcaacagagaggaccaagaagacattatggactttgaa
gaggaagcagagaaagatgatgctggaggttcagactcagaaatggatgagaatgttgga
tggagcacagttaacttggatgaagagcagaaacagccagatttctccacagcctctgcc
accattttggatgaagaacccattgtcaaatccggtcttgcagctgctttgctgttgtgc
aaaaacaaaggtctactggacactgaaatgcagaaggtagcccgtgtcagggcaacaaaa
ggtgctttgcctaatgacaactactgcattgaggacaagatgggctttgatgacaagtac
agtcgcagagaagaatacagaggcttcactcaagatttcaaggataaggatggctataag
cctgacgtcaagattgagtatgtggatgaatctgggcggagactcactccaaaagaggct
ttcaggcagctttcacatcgattccatggtaaagggtctggaaagatgaagacggagagg
aggatgaaaaagctggaggaagaggcactgctgaagaagatgagcagcagtgatactcct
ctagggacggtggctttgcttcaagagaagcagaaatctcagaaaacaccatatattgtg
cttagtgggagtgggaagagtatgaatgcaaacaacatcactaaataa
DBGET
integrated database retrieval system
