KEGG   Etheostoma spectabile (orangethroat darter): 116670242
Entry
116670242         CDS       T08457                                 
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
esp  Etheostoma spectabile (orangethroat darter)
Pathway
esp03082  ATP-dependent chromatin remodeling
esp03083  Polycomb repressive complex
esp04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:esp00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    116670242
   03083 Polycomb repressive complex
    116670242
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    116670242
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:esp03036]
    116670242
Chromosome and associated proteins [BR:esp03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     116670242
  Histone modification proteins
   HAT complexes
    HATB complex
     116670242
   HDAC complexes
    Sin3A-HDAC complex
     116670242
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     116670242
    PRC2.2
     116670242
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     116670242
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    116670242
  Chromatin remodeling factors
   NuRD complex
    116670242
   NuRF complex
    116670242
   NuRF complex (fruit fly)
    116670242
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_RIG_1st WD40_MABP1-WDR62_1st eIF2A Beta-prop_IFT140_1st MIOS_WD40 Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 116670242
NCBI-ProteinID: XP_032356559
LinkDB
Position
20:12454832..12459272
AA seq 426 aa
MADKDAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
YSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEI
KINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPEDPSGECTPDLRLRGHQK
EGYGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLL
HESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTV
ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPED
AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAA
DSEVQA
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggcggataaagacgctgcatttgatgatgctgtggaggaaagggtgatcaatgaggag
tacaagatctggaagaagaacactcctttcctctacgacctggtcatgactcacgccctg
gagtggcccagcctcacagcccagtggctgcctgatgtcaccaggccagagggcaaagac
tacagtgtgcacagactggttttgggaacacacacttccgatgagcagaatcaccttgta
attgctagtgttcagctccctaatgatgatgcccagtttgatgcatcacactatgacagc
gaaaaaggagcagagtttggaggctttggctctgtaagtgggaagattgagattgagatc
aagatcaatcatgagggggaagtgaacagagcccgctacatgcctcagaatccttgcatt
attgccacaaagacccccaccagtgacgtgctggtatttgattacacaaagcacccctcc
aaacctgaagacccttctggagaatgcaccccagacctgcggttgagaggccaccagaag
gagggctatggcctctcctggaacccaaacctcagcggctgcctcctcagtgcttctgat
gaccatacaatctgcctatgggacatcagcacagtgcctaaagagggaaagatagtggat
gccaagaccatcttcacaggccacacggctgtggtggaggatgtttcctggcacctgctt
cacgagtcgctctttgggtctgtggccgatgaccagaaacttatgatctgggacacacga
tccaacaacacctccaagcccagccatgcagtggacgcccacacagctgaggtcaactgc
ttgtccttcaatccctacagcgagttcatcctggccactggctctgcagataagaccgtg
gctctttgggacttaaggaacttgaagctaaagctgcactcgtttgagtctcacaaagat
gagattttccaggttcagtggtctcctcataatgaaacgattctggcctccagcggcacc
gacaggaggctcaatgtctgggacctcagtaagatcggagaggaacagtcaccggaggat
gctgaggatggtcctcctgagctactgttcatccacggaggacacacagcaaagatctcc
gacttctcttggaaccccaacgagccatgggtcatctgctctgtatcagaggacaacatc
atgcaagtctggcagatggctgaaaatatctacaatgacgaggacccagaaggtgctgca
gattcagaggtgcaggcatga

DBGET integrated database retrieval system