Etheostoma spectabile (orangethroat darter): 116670293
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Entry
116670293 CDS
T08457
Name
(RefSeq) SLIT and NTRK-like protein 3
KO
K25834
SLIT and NTRK-like protein 3
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116670293
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRRCT
Motif
Other DBs
NCBI-GeneID:
116670293
NCBI-ProteinID:
XP_032356641
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Position
20:complement(4392283..4408695)
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AA seq
960 aa
AA seq
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MQWVTLTVALGCVCLSRASHTPTPTPTSTHTPLVDNSEEEVDEPCFEPCTCEVKEGVLHV
HCDGRSFTNVSQVSQSWVRPFKLNLQRNSLRRLYSNGFQHLGNAVSINLGNNALQDIKVG
AFHGLAKLRRLYLHENKLEVFRNDTFAGLEALEYLQADYNVIKRIDSGALRFLYKLRVLI
LNDNLIPVLPAHLFRSVSLTHLDLRGNRLKSLAYAGTLEYVGRSLMELQLEENPWNCGCE
SVQLQQWLGQIPYTAVVGDVTCEYPFHLHGKDLREIPRKELCADLPDKELQAEGGGPSAG
SQPQHVPPNSKPNSHPGHVRPTKPSSMVHGSRQNTHPSSTSSSSSSAERKDRERQPRPTK
RPRPSRTSPTPRSLMPNQNPPVAGYQTRPPIPIICPLGCTCNLHIIDLGLTVNCKENGFL
NVSQLTPRPLNGRKLYLSGNLIQRIYRTDFWNFSSLDLLHLGNNRISYLQDGAFSSLTSL
RSLYLNGNNLEMLSPHMFLGLQNLRYLYFEYNEIHEVDPGTFNSMPSLQLLFLNANLLRS
LPLGVFSGVNLARLNLRNNHLLQLPLVGVLEHLTGLVQVDLQQNPWECNCEAAPLKRWLE
GLSAVVVVGEVVCHSPEKTKGVDLRSLSMELLCPELEPQEDQEQEQQTATSTAVDSGVSL
GYPSSGLGPLAPPGKDSIPLSVLVLSLLVLFVSAFFAAAALIAYALRRRDKLPFRRQGEV
DLAGIQMECGIFTEQTHHHHHHHHHHGLPETPPLPPAEHNHVYDTILPPEAASKAPGPAS
APHMCSNPIYKEEQDASVKQRPPHPQQQTFAASKESEAGYCSAAEKEREWTLEVSSSPIN
TVTGAMGPLPGLHGNGILCPTVIDSQGPTPKVELVDCLFRLPAPEFRDLPDRYARPPPRY
PHPQDSKQDARPDQTLVVTTASSTSGSGNSSQSEQGAGEQRTRLRTTPDYMEVLDRSYQF
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgggtcactctgacagtggccctggggtgtgtgtgtctgtccagggcgtcacac
acccccacccctacccccacctccacacacacccctctagtggacaactctgaggaggaa
gtggacgagccgtgctttgagccgtgcacgtgcgaggtcaaagaaggcgtgctgcacgtg
cactgcgatggacggagcttcactaatgtcagccaggtgtcacagtcgtgggtccgccct
ttcaaactcaacctccagaggaactctctgaggcgtctctatagcaacgggtttcagcac
cttggcaacgcagtgtcgataaaccttggaaacaatgcactacaggacatcaaagtagga
gctttccacgggttggccaaactaagacgcctgtacctccacgagaacaagctggaggtc
ttcagaaatgataccttcgctggcttagaggctctggaatacctccaggccgactacaac
gtgatcaaacgaattgacagcggtgctctgaggttcctctacaagctccgggttctcatc
cttaatgacaacctgatcccggtcctacctgctcatcttttcagatctgtgtctctgact
catctggacctgcggggaaaccgtctgaagagcctggcatatgctgggaccctggagtat
gttggtcgttccctaatggagctacagctggaggagaatccctggaactgtggctgtgag
tcagtgcagctacagcagtggctgggtcagatcccctacacggctgtagtcggggacgtt
acttgcgaatatcccttccatcttcacggcaaggacctgagggaaatcccacgcaaggag
ctgtgtgctgacctcccggacaaagagctacaagcagaggggggtggtccatcagcagga
tcacagccccaacatgtacccccaaactctaaacccaactcccaccctgggcatgtcagg
ccgactaaaccctcctccatggttcacggctcccgccagaacacacatccctcctccact
tcgtcgtcctcatcctcagcggagcgtaaagacagggagaggcaaccaaggccgactaaa
aggcctcgaccgtccagaacatcccccacacctcgcagtctgatgcccaaccagaacccc
cccgtggctggctaccaaacacgaccccccatccccatcatttgtcccctgggctgcact
tgcaacctgcacattatagacctcggcctgaccgtcaactgcaaggagaacggcttcctc
aatgtgtcccagctcacacctcggcctctcaacggccgcaagctgtacctgagtggaaac
ttaatccagaggatctatcgcacagacttctggaatttctccagccttgacctgcttcac
ctggggaacaaccggatctcgtacctccaggacggggctttctccagcctcacgagcctg
aggagcctctacctgaatgggaacaacctggagatgctcagtccccacatgttcctgggg
ctgcagaacctgcggtacctttattttgagtacaacgagatccatgaggtagatcccggg
accttcaactccatgccgtccctccagctgttgttcctcaacgccaacctgttgcggagc
ctccctcttggtgttttttctggagttaatctggctcggctcaatctacgaaacaaccac
cttttgcagcttccgctggtcggcgtgctggagcacctcaccggactggtacaggtggac
ctgcagcagaacccctgggagtgcaactgtgaagcagctccactcaagcgttggctggag
gggctcagcgcggtggtggtggtgggagaggtggtctgtcattccccggaaaagaccaaa
ggagtagacctccgctccctctccatggagttgctctgccctgagctggagccccaggag
gaccaggagcaggagcagcagacagccacctccacagccgtagacagcggcgtttcgctt
ggctaccccagctcagggctgggccccctggcccctccggggaaggattcaatccctctg
tcggtgttagtgctcagcctgctggtgttgtttgtgtctgcattctttgcggcagcggca
ctaatcgcctacgcccttaggaggagggacaagctgccgtttcgtcgccaaggagaggta
gacttggcgggcatccagatggagtgtggaatcttcactgagcagacgcaccaccaccac
caccaccaccatcaccacggcctccccgagacgccgcccctacctccggctgaacacaac
cacgtctacgacaccatcttgcccccggaggctgcgtcgaaagctcccggccctgcttca
gccccacacatgtgtagcaaccccatctacaaagaggagcaggatgcgtcggtgaaacag
cggccgccgcacccacagcagcagacgtttgcagcttccaaagagagcgaggcaggatac
tgctctgcagcagagaaggagagggagtggactctggaagtgtcctcatcacccatcaac
accgtcacaggagcaatgggaccgctccccggtctccacgggaacggcatcctctgcccc
acagtgatcgacagccagggccccacccctaaggtcgaactggtggactgcctcttcaga
cttcctgcccccgagttcagagacctgccagacaggtacgcgaggccgccgccccgctac
cctcacccccaagactccaaacaggacgccagacccgaccaaacgctcgtggtcaccacc
gccagctccacatccggcagtggtaacagcagccagagtgagcagggagcgggagagcag
agaaccagactgaggaccacaccagactacatggaggtgctggaccggtcttaccagttt
taa
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