Etheostoma spectabile (orangethroat darter): 116670483
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Entry
116670483 CDS
T08457
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
esp03036
]
116670483 (msh4)
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Meiosis-specific proteins
Others
116670483 (msh4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
KTI12
nSTAND_NTPase5
nSTAND3
Med31
PPDFL
ATPase_2
Motif
Other DBs
NCBI-GeneID:
116670483
NCBI-ProteinID:
XP_032356934
LinkDB
All DBs
Position
20:10351810..10358952
Genome browser
AA seq
922 aa
AA seq
DB search
MFRSSTDEVGDTPECGQTWGVSPMDRSGLNETTSYGPASTSSGSSHQSLDDGSTIFNHGA
SLPRVASGQFHHSLRLGRNNSSLFASTSDSSSHRSRGGTPKQRRTPGSAGATGTHPARTP
VTDHTVTTCSSATTTSGASVIVAVVEGRGLARGEIGMASLNLKYPELILSQFADTGTYAK
VITKIHILVPLEILMPDTASEKGKGTKLFNLITENFPGVAFTAIQRKYFNERKGLEYIQQ
LCAPEFATVLMEVQAKYYCLAAAAALLKYLEFIQNSVYAAKSLKVSFKGSEQTAMIDSAS
AANLELVVNNRDHRSEHSLLGVLNHTKTPGGARRLRSNILEPLVDVDTINIRLDTIQELL
QDEELFFGLKNAIGHFLDIDQLLSVLVQIPKQETVQVAEAKITHVIQLKHTLDLVPRLRM
VLKNCKTALLKAYYTSLEDNRFDMILEQIKTVINDDTTYLKGSLNMRTQKCYAVRPNINE
FLDIARRAYTEIVDDIAGLVNQMGERYGFPMRTSFSTARGFFIQMKLEGVVLPEGKLPSE
FIKVTKHKNNYGFTIADLMKMNDRCDEALREIFHMSYVVICKLLSTIHEHIHCLYKLSDA
VSMLDMLLSLANTCTISDYVRPEFTDTLAIKQGRHPILERIVGQQPISNNSYISEGSNFV
IITGPNMSGKSTYLKQVALCQIMAQIGSFVPAEYASVRVADQVFTRIGVDDDFETNSSTF
MLEMKEISYIIHNVSDRSLIIIDELGRGTSAEEGIGICHSVCEFLLSHKAFTLFATHFME
LCQLESLYPNVENQHMEVQHTRSGDTGTESVVYTYLLNRGCSEERHYGLRAAEMTALPSN
IIQEAKIIASKVSQQLLAKHHSDPETQRQRAVYHLATRLLQTARNSRLDPDSLRMYLKGL
KKQYEAELQAAGEPASIDTEEE
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtagcagcacagatgaggtaggtgacactccagaatgtggacaaacatggggc
gtgtccccaatggacagaagcggactaaatgaaaccacctcgtacggtcccgcatcaacg
tcctccggttcatcccatcaaagtttagatgatggcagtacgatcttcaaccatggtgca
tcactcccccgagtggcctcaggtcagttccatcacagcctcaggttaggcaggaacaat
tcatcactatttgcatctacctcggatagctcttcccaccgcagccgtggaggaacaccg
aaacaaaggaggacccccgggtctgctggagctactggcacacacccagcacggacacca
gtgactgatcacactgtaacaacttgctcctctgcgaccacaacctctggtgcatctgtg
attgtggcagtagttgaagggcgtggtttggccaggggagagattggcatggccagtctc
aacttgaaatatccagagcttatactctcacagtttgcagacactgggacctatgccaag
gtcataaccaagattcacatcttggtgccactggaaatactgatgccagacacagccagt
gaaaaggggaaagggacaaagctgttcaacctcatcacagaaaactttccgggagtagct
ttcactgctatccaaagaaaatattttaatgaaaggaaaggactggagtacattcagcag
ctgtgtgctccagaatttgccaccgtccttatggaagtacaagctaagtattattgccta
gcagcagcagctgctttgctgaaatatttagagttcatccagaactctgtctacgctgcc
aagtctctcaaagtgagctttaaggggagtgaacagacagcaatgattgactcagcatct
gccgctaatttggagttggtggtcaataatagagaccacaggagcgagcattccctttta
ggagtactaaatcacaccaaaacacctggtggtgctagaaggttgcgctccaatattctg
gagcctctggtggatgtggacaccatcaacatacgcttggacaccatacaagagttgctg
caggatgaggagctcttttttggcctgaagaatgccataggtcatttccttgacattgac
cagctgctttctgttcttgtccagatcccaaagcaggaaacagttcaagtggctgaagca
aaaattacacacgtcattcagctgaaacacacattggacctggtgccacggttaaggatg
gtgttaaagaactgcaagacagctctgctcaaggcatactacacctcactggaagacaac
aggtttgacatgatcctagagcagatcaagacggtaattaatgatgacactacctacttg
aaggggagcctgaacatgcgcacccagaagtgttatgctgtccgcccaaatatcaacgag
ttcctcgacattgcacgcagagcttacactgagatagtagacgacattgcagggctagtg
aatcagatgggggagagatacggtttcccaatgcgcaccagcttcagcacagctcgaggt
ttcttcatccagatgaagcttgaaggagtggtcttgcctgaagggaaacttccctctgag
tttattaaggtcacaaagcacaagaacaactatggcttcactattgctgacctgatgaag
atgaatgaccgctgtgatgaggccctgagggagatctttcacatgtcctatgtggtgata
tgtaaactgctcagcactatccacgaacacattcactgcctatacaagctctctgatgcc
gtatccatgctcgacatgttgctgtcactggccaatacttgcaccatctcagactatgtg
cgcccagagttcacagacacactggccatcaagcagggtcgtcaccccattctggagaga
attgttggacagcagcctatatcgaacaatagctacatctccgagggcagcaactttgtc
attatcactggacccaacatgagcggcaaatccacctacctcaaacaggtggcgctgtgt
cagatcatggctcagataggttcttttgtccctgccgagtatgcctctgttcgtgttgct
gatcaggttttcaccagaattggtgtggatgatgattttgaaactaactcctccaccttc
atgttggaaatgaaggagatctcttacataattcacaacgtaagtgacaggtccctgatc
atcatagacgagttgggccgtggtaccagtgctgaggagggcattggcatctgtcactca
gtttgtgagttcctccttagccacaaggcgttcaccctgtttgccacacactttatggag
ctgtgccaactcgagtcactttatcccaatgtggagaaccagcacatggaggttcagcac
acacgcagtggtgacactggcacagagagtgtggtgtatacatacctgctgaatcgagga
tgctctgaagaaagacactatggtctgagagcagcagaaatgactgcacttccttcaaac
ataatccaagaggcaaagataattgcctctaaagttagccagcagcttttggccaaacat
cacagtgatccggaaacacagaggcaaagagctgtgtaccacctggccacccgcctcctg
cagactgctaggaactccagactggaccccgacagcttgcggatgtatctgaagggcctg
aagaagcagtatgaggcagagctgcaggcagcaggggagccagcgtccattgacacagag
gaggaatga
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