Etheostoma spectabile (orangethroat darter): 116670487
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Entry
116670487 CDS
T08457
Symbol
lef1
Name
(RefSeq) lymphoid enhancer-binding factor 1 isoform X1
KO
K04492
lymphoid enhancer-binding factor 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04310
Wnt signaling pathway
esp04520
Adherens junction
esp04916
Melanogenesis
esp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
116670487 (lef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116670487 (lef1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
116670487 (lef1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116670487 (lef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116670487 (lef1)
Transcription factors [BR:
esp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
116670487 (lef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116670487
NCBI-ProteinID:
XP_032356940
LinkDB
All DBs
Position
2:10899330..10939282
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AA seq
376 aa
AA seq
DB search
MPQLSGGGGDPELCATDEMIPFKDEGDPHKEQIFAELSHSEEEGDLADIKSSLVNESESS
PNSHDAARQSQIQQDSYHEKHRDHSEDGKLQDLYSKGHPYQGYPGYIMMSNMNDSYMNNG
SLSPPMPRTSNKVPVVQPSHAVHPLTPLITYSDEHFAPGSHSGLHPQDINNKQGMPRHHP
GPDMTNFYSLSPGGVGQITPPLGWFSHHMVPGPPGPHATGIPHPAIVNPQVKHEPPHETD
IMHMKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWH
ALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKMQESAPGGKRNNFSTC
KAKAAATGPLLEMEAC
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgccacagttatcaggcggcggcggagacccggagctttgcgccacagacgaaatgatc
ccgttcaaagacgaaggagacccgcataaggagcagatcttcgccgagctcagccactcg
gaggaagagggagacctggcagacatcaagtcatctctggtcaacgagtcagagagcagc
cccaacagccacgatgcagctagacagtcccaaatacagcaagattcatatcatgaaaaa
cacagagaccattctgaagacggaaaactccaagacctgtacagtaaaggccatccgtac
cagggctacccgggctacatcatgatgagcaacatgaacgactcctacatgaacaatggc
tccctgtcgccgcccatgcccagaacgtccaacaaagtccccgtggtgcagccgtctcat
gcagtccacccactcaccccactgatcacgtacagcgacgagcacttcgccccaggatcc
cattctggtcttcatccccaggatatcaacaacaaacaaggaatgccaaggcatcaccct
ggaccagacatgaccaacttctactccctgtctcctggaggagtcggacagatcacgcca
ccgctgggctggttctcacaccacatggtgcccggccccccaggtccccacgccacaggg
atcccccacccggccatcgtcaacccacaggtcaaacacgagccaccgcatgaaacagac
atcatgcacatgaaaccccagcacgaacagagaaaggagcaggagcccaaaagaccgcac
atcaagaagccgctaaacgccttcatgctctacatgaaagaaatgcgtgcgaatgtggtc
gccgagtgcacgctgaaggagagcgctgccatcaatcagatcctgggacgaaggtggcat
gctttatctcgggaagagcaagctaagtattatgagttagcccgcaaggaacggcagctc
cacatgcagctctacccaggctggtccgctcgagacaattatggaaagaagaagaagcgg
aagagggagaagatgcaggaatccgccccaggaggaaaacggaacaacttctccacatgc
aaagcgaaggcagcagctacgggccctctgctagagatggaggcctgttag
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integrated database retrieval system
