Etheostoma spectabile (orangethroat darter): 116670542
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Entry
116670542 CDS
T08457
Name
(RefSeq) alpha-actinin-1
KO
K05699
actinin alpha 1/4
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04510
Focal adhesion
esp04517
IgSF CAM signaling
esp04518
Integrin signaling
esp04519
Cadherin signaling
esp04520
Adherens junction
esp04530
Tight junction
esp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116670542
04518 Integrin signaling
116670542
04519 Cadherin signaling
116670542
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116670542
04520 Adherens junction
116670542
04530 Tight junction
116670542
09142 Cell motility
04810 Regulation of actin cytoskeleton
116670542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116670542
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
esp04812
]
116670542
04147 Exosome [BR:
esp04147
]
116670542
Membrane trafficking [BR:
esp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116670542
Cytoskeleton proteins [BR:
esp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116670542
Exosome [BR:
esp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116670542
Exosomal proteins of colorectal cancer cells
116670542
Exosomal proteins of bladder cancer cells
116670542
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_8
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
116670542
NCBI-ProteinID:
XP_032357007
LinkDB
All DBs
Position
20:complement(854847..923537)
Genome browser
AA seq
881 aa
AA seq
DB search
MHNMDDYDGEIDYMHQEDDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDF
RDGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFITGKGVKLVSIGAEEIVDGN
AKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGF
CALIHRHRPELIDYGKLRKDDPMTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIM
TYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLATDLLEWIRRTIPWLEN
RLPENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGK
MVSDINNAWGNLEGAEKGYEEWLLNEIRRLERLDHLAEKFRQKAAIHEAWTAGKEDMLQK
HDFETASLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQRI
CDQWDALGALTQKRSEALQRTEKLLETIDQLYLEFAKRAAPFNNWMEGAMEDLQDTFIVH
TIEEIQGLSTAHEQFKATLPDADKERQAILGIHNEIAKIVQTYHVNMAGTNPYTTINPQE
INAKWDKVRQLVPQRDQALIEEHARQQNNERLRRQFANQANVIGPWIQNKMEEIGRISIE
MHGTLEDQLTHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIAGAGSS
YSPPSPADHSGTLGAEEFKACLISLGFDIANDAQKRSGIMDAEDFKTCLISVGYNLGENE
FSRIMSIVDPNRMGIVTFQAFIDFMSRETADTDTADQVMASFKVLAGDKNYILADELRRE
LPPDQAEYCIARMAPYTGPDAVPGALDYMSFSTALYGESDL
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgcataatatggacgactatgatggagaaattgactatatgcaccaggaagacgactgg
gaccgggatctcctcctggatcctgcatgggagaagcagcagagaaagacattcacagct
tggtgtaactctcacctgaggaaagcaggaacgcagatcgagaacatcgaggaggacttc
cgggatgggctgaaactcatgctgctgctggaggtcatctcaggcgaacgcttggccaaa
cccgagagaggcaagatgagagtgcacaagatctccaacgtcaacaaagcgctcgacttc
atcaccggcaaaggagtgaagctggtgtctatcggagcagaggagatcgtagacggcaac
gccaagatgaccctgggaatgatctggaccataatcctccgcttcgccatccaagacatt
tctgtggaagagacgtcggccaaggagggcctgctgctgtggtgccagaggaagaccgcg
ccctacaagaatgtcaacatccaaaactttcacatcagctggaaagatggtctgggtttc
tgtgcgctcattcaccgccaccgtccagagctcatcgactacggaaaactgcgcaaggac
gaccccatgaccaacctgaacacagcctttgacgtggcagagaagtacctggacatcccc
aagatgttggatgcagaagacattgtgggcactgcccgtccggacgagaaggccatcatg
acctacgtctctagcttctaccacgccttctcaggcgcccagaaggcagagacggcggcc
aacaggatctgcaaggtgctggctgtcaaccaagagaatgagcagctgatggaggactat
gagaagctggccactgatctgttggagtggatccggcgcaccatcccctggttggagaac
cgcctgcccgagaacaccatgcaggccatgcagcagaagctggaggacttccgagattac
cgccgcctccacaagccgcccaaagtgcaggagaagtgccagctggagatcaacttcaac
acgctgcagaccaagctgcggctcagcaacaggcccgccttcatgccctcggagggaaag
atggtctcggacattaacaatgcttggggaaatctagagggagcagagaagggctacgag
gagtggctcctcaatgagatccgcaggctggaaagactcgaccacctggcggagaaattc
cgccagaaagcagccatccatgaagcttggactgcaggtaaggaggacatgctgcagaag
catgactttgagacggcctctctgtcagagatcaaggccctgctgaagaaacacgaggcc
ttcgagagcgatctggcggcacatcaggaccgcgtggagcagatcgctgccatcgcacag
gaattaaatgagctggactactacgactcccccagtgtgaacgctcgctgccagcggatc
tgtgaccagtgggacgccctgggagccctgacccagaaacgcagcgaggctctgcagaga
actgagaagctgcttgagaccattgaccaactgtacctcgagtttgccaaaagagcggct
ccgttcaacaactggatggagggcgccatggaggatctgcaggacacctttatcgtccac
accatcgaagaaatccagggattgagcacagcccacgagcagttcaaagccacgctgcca
gacgcggacaaagagcgccaggccatcctgggcatccacaacgagatcgccaagatcgtg
cagacctatcatgtgaatatggctggcaccaacccctacaccaccatcaacccacaggag
atcaacgccaaatgggacaaggtccggcagctggtgccgcagcgcgaccaggctctgatc
gaggaacacgcccggcagcagaacaacgagcgtctgcgccggcagtttgccaaccaggcc
aacgtcatcgggccctggatccagaacaagatggaggagattggccgcatctcgatcgag
atgcacggcaccctggaggaccagctgacgcacctccgccagtacgagaagagcatcgtc
aactacaagccaaagatcgaccagctggagggagaccaccagctcattcaggaggcgctc
atctttgacaacaagcacaccaactacaccatggagcacatcgcgggggctgggagcagc
tactccccaccatcgcccgcagaccactcgggcactctgggcgcggaggagttcaaggcc
tgcctgatcagcctgggcttcgatatcgccaacgatgcacagaagagatcaggaatcatg
gacgccgaagacttcaaaacctgccttatctccgttggttacaacctgggggagaacgag
ttctcccgcatcatgagcatagtggatcccaaccggatgggcatcgtcaccttccaggcc
ttcatcgacttcatgtcccgcgagacggccgacacggacaccgccgaccaagtcatggcc
tccttcaaagtcctggcgggggacaagaactacattttagccgatgagctgcgccgggag
ctgcctccagaccaggcggagtactgcatagcccgcatggccccctacacgggccccgac
gccgtgcccggtgccctggactacatgtccttctccacagctctgtacggagagagcgac
ctctga
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