Etheostoma spectabile (orangethroat darter): 116670686
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Entry
116670686 CDS
T08457
Symbol
pdlim3
Name
(RefSeq) PDZ and LIM domain protein 3
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116670686 (pdlim3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
esp04990
]
116670686 (pdlim3)
Domain-containing proteins not elsewhere classified [BR:
esp04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
116670686 (pdlim3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
DMA
Motif
Other DBs
NCBI-GeneID:
116670686
NCBI-ProteinID:
XP_032357216
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All DBs
Position
2:complement(7070719..7087403)
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AA seq
315 aa
AA seq
DB search
MALSVVLDGPAPWGFRLTGGKDFNQPLTISRVTPGSKAAVANLCAGDVILAIEGVPATDM
LHCEAQNKIKEARNQLGLTVERNDSRLWSPRAVEDGKVHPYKINLEAEHQEYKPIGIAHN
RKAQPFVAAANIDDTHQVVSSAYNTPIGLYSSGNIQDAMEGQIRGLVLPKPESHKTLTSI
KDSDVYQMLQNDQEEPQEPRQSGSFRALQEFIDSDGTRPIVTRTVKAPTTRPTPPTGNLQ
KLPVCDKCGNGIVGTVVKARDKYRHPGCFVCSDCDVNLKQKGYFFVEGQLYCETHARSRM
RPPEGHDLITTFPSA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcactcagcgtcgtgttggatggtccggccccctgggggtttcgcctgacaggagga
aaggactttaaccagcccctgaccatctccagggtcacccccggcagtaaagccgctgta
gccaacttgtgtgccggtgacgtcatcctggccatcgagggagtcccagccacagacatg
ctgcactgtgaagcccagaacaagataaaagaggccaggaaccagctcggtcttactgtc
gaaaggaatgactcaagactgtggtccccgcgagctgtggaggatggaaaagttcaccca
tataaaatcaacctggaagcagaacaccaggaatataaacctattggcatcgctcacaac
cggaaagctcagccgtttgttgcagcagcgaacatcgatgacacgcatcaggtggtcagt
tcagcctacaacacccccataggcctgtactcgtcaggcaacatccaggacgccatggag
ggccagatccgaggcctggttctacccaagcctgagagccacaagactttgaccagtatc
aaggattctgacgtgtaccagatgttgcagaacgaccaggaggagccccaggagcctcgg
cagtctggctccttcagagccctgcaggagtttattgacagtgatggcactcgtcccatt
gtgaccaggaccgtaaaagctcccacaaccaggccaactccgcccacaggaaacctgcag
aaactgcccgtgtgcgacaagtgtgggaatgggattgtcgggacggtggtgaaagcacga
gacaaatatcgtcaccctggttgctttgtgtgctccgactgtgacgtcaacctcaaacag
aagggctatttctttgtggaggggcagctgtactgtgagactcacgctcgctctagaatg
agaccaccggagggacatgacctcatcacaactttcccttctgcatag
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