Etheostoma spectabile (orangethroat darter): 116670822
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Entry
116670822 CDS
T08457
Symbol
ercc4
Name
(RefSeq) DNA repair endonuclease XPF isoform X1
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03420
Nucleotide excision repair
esp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
116670822 (ercc4)
03460 Fanconi anemia pathway
116670822 (ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
esp03032
]
116670822 (ercc4)
03400 DNA repair and recombination proteins [BR:
esp03400
]
116670822 (ercc4)
DNA replication proteins [BR:
esp03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
116670822 (ercc4)
DNA repair and recombination proteins [BR:
esp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
116670822 (ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
116670822
NCBI-ProteinID:
XP_032357393
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All DBs
Position
21:8569904..8583219
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AA seq
897 aa
AA seq
DB search
MAGPLLEFETEMFLSLFGCDGLLVAAEGMGIDRILLQFMRVYSEQGSLVLLLNTTTPEQE
YFTEQLRAEGVTHLPRTVTSDVQSTERYNVYTEGGVLFVTSRILVVDFLTDRIPAHLISG
ILVYRAHKIIESCQEAFILRLFRQKNKTGFIKAFTDKATSFSSGFCQVERVMRNLFVKKL
YLWPRFQASVNTALDRHKPEVVELHVSLTPAMRAIQSSILDIMSACLKELKRYNPTLEAE
DLSVENTLGNAFEKTIRHYLDPLWHQLGAKTKALVQDLKVLRVLLLYLTQYDCVTFLNLL
ESLRSSQKIFGSNSGWLFLDSSTSMFMNARGRVYRIPDSKKKAKVGAEAEKPKSSSALEV
KRELVLEKSPKWDALTEVLQEIEKENQRSEHEPGRVLICASDDRTCAQLQQYIRHGSDWM
LNRLYARTIGKRDSAAAAAFELDLHKKGNCWPKKRAKGKEPAQKKSAKSKKRPSLTLTQM
VGKEEMDEAAAMGSSGDEDELMGEDGGEEEQLKLDLSSDAYYGVLKEPLTVIHPLKGLTD
PHSLTRVLHEVEPGFVVLYDAELSFVRQLEIYKASRPGKALRVYFLIYGGSTEEQKYLTT
LSKEKKAFEHLIREKATMVVPEEREGREDTNLDLARNLEPANATTNTRKAGGQDQPKEPS
RVIVDMREFRSELPSLLHRRGLDIEPVTLEVGDYILTPDTCVERKSVSDLIGSLQTGRLY
TQCLSMTRYYKKPVLLIEFDPAKPFSLTARSDYRHEISSYDISSKLTLLTLHFPRLRILW
CPSPHATAELFLELKQGRSEPDAAAAQAVTAESDMVAESADLYNPGPYDFLLKMPGVNTK
NYRVLIKNADSLADLAKLSQDKLAEILGNASNAKLLYEFLHNVADVPAPVQKARQTS
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggcggggccgctgctggagttcgagactgagatgtttctgagcctgttcggctgtgac
gggctgctggtagcggcggaggggatggggatagaccgcatcctgctgcagttcatgcgg
gtttactcggagcagggcagcctggtccttctgctcaacacaaccacaccagaacaggaa
tatttcacggagcagttgcgagcggagggtgtgacccacctacccaggacagtgaccagc
gacgtgcagagcactgagcgctataacgtttacactgaaggaggagtgctgttcgtcacc
agcagaatcctggtggtcgacttcctcactgaccgcatccccgctcatctcatatcgggc
atcctggtgtatcgtgctcataaaatcatcgagtcgtgtcaggaggccttcattcttcgt
ctgttcagacagaagaacaagacaggcttcattaaagccttcactgacaaggccacgtcc
ttctcctcgggcttctgccaggtggagcgtgtgatgaggaacctcttcgtcaagaagctc
tatctgtggcccaggtttcaagcatcagtaaacacagcgctggacaggcacaaacccgag
gtggtagagctccatgtgtcactgacgccggctatgagggccatccagagctccatcctg
gatatcatgagcgcttgtctgaaggagctgaaacgctacaaccccaccctggaggccgag
gacctctccgtggagaacactcttggcaacgcctttgaaaagaccatccgtcactacctg
gaccccttgtggcaccagctgggagcaaagaccaaggccctggtccaggacctgaaagtg
ctgagggttctcctgctctacctcacccagtacgactgcgtcaccttcctcaatctgctc
gagtcgctgcgctccagccaaaagatctttgggtccaactcagggtggttgttcctcgac
tccagtacctccatgtttatgaatgccagaggtagagtgtaccgcatccctgacagcaag
aaaaaagccaaagtgggagcggaggcagagaaaccgaagtcctcctctgccttagaggtg
aagcgagaactagtgctggaaaagagcccaaagtgggatgctctgacggaggtactgcag
gagattgagaaggagaaccagcgctctgaacatgaaccaggtcgggtgctgatctgtgcc
agtgatgacaggacttgtgcccagctgcagcagtacatcaggcacggctctgactggatg
cttaaccgactatatgcccgcacaatcggtaaacgggactctgctgcagccgctgccttt
gaacttgacttgcacaaaaagggcaactgctggcctaaaaaaagagccaagggaaaggag
cctgcacagaaaaagtctgcaaagagtaaaaaaaggccatccctgaccctgacccagatg
gtggggaaagaggagatggatgaagcagctgcgatgggcagcagtggagacgaggatgaa
ctgatgggggaggatggaggggaggaagaacagctgaagctggatttgtcatcagacgcc
tactatggtgtcttaaaggagccgctgaccgtcatccacccactgaaaggcctcactgac
ccccacagcttgacgagggtgctgcatgaggtggagcccggttttgtggtgctgtacgat
gctgaactcagtttcgtccgccagctggagatctacaaagctagccggcccggaaaggcg
ctgagggtgtatttcctcatctacggaggctcgacagaagaacagaagtacctgacgacg
ctgtctaaggaaaagaaagcttttgaacacctgatcagggaaaaggctactatggtcgtc
ccagaggagagggaggggcgggaagacaccaacctggaccttgctagaaatttagagcct
gccaatgccaccactaacacccgcaaagcaggaggccaggatcagcccaaagagccctcg
cgagtcattgtggacatgagggagttccgcagtgaactgccctccttgctgcaccgccgt
gggctggacatcgagcctgtcaccctagaagtaggtgactacatcctgaccccggacaca
tgcgtcgagcgcaagagcgtcagtgatctgattggctcgttgcagaccggccgcctctac
acccagtgtctctccatgacccgctactacaaaaaaccagtgcttctcattgagtttgac
ccagcaaaaccgttttccttaacggcccgatcagattaccgtcatgagatatcgtcctat
gatatttcttcaaaactcaccttactcaccttgcatttcccccggctccgtatactctgg
tgcccctcaccacatgccacagctgagctcttcctggaactgaagcaaggtcgctctgaa
cccgatgctgcagcagctcaggcagtcacagccgagtcagacatggtggctgaatcggca
gacctctacaaccccggaccgtatgacttcctgttgaaaatgcctggggttaatacaaaa
aactatcgggttctcataaaaaatgcagacagtctggcagatttggccaaactcagtcag
gacaagctagcagaaatactcgggaatgccagcaacgctaagttgctgtatgagtttctg
cataatgtcgctgacgttcctgctcctgtgcagaaggccagacagacatcatag
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