Etheostoma spectabile (orangethroat darter): 116670828
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Entry
116670828 CDS
T08457
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116670828 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116670828 (gspt1)
03012 Translation factors [BR:
esp03012
]
116670828 (gspt1)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
116670828 (gspt1)
Translation factors [BR:
esp03012
]
Eukaryotic type
Release factors
116670828 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
116670828
NCBI-ProteinID:
XP_032357403
LinkDB
All DBs
Position
21:8109077..8120661
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AA seq
597 aa
AA seq
DB search
MDPRDTAPDSWELEEDAEAPAAAAELPTAFAALNVNAKPFVPNVNAPVFVPSFLQASAVE
ITASDGATDPIASMEVAETAGMHPHCIPGTACSAPVENGGTEADMTTEEETWEQKEEPGG
GGGGGDEDLSLGGACEEGAARNEDEEMMEEEEEEMPMPKVAPALPDAPKKEHVNVVFIGH
VDAGKSTIGGQIMYLTGMVEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEV
GRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTRE
HAMLAKTAGVKHLIVLVNKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCS
GLTGANLKEPVTECPWYTGLAFIPHLDSLPNFTRSNDGPVRLPIVDKYKDMGTVILGKLE
SGCISKAQQLVMMPNRHTVEVLSLLSDDVETDDATPGENLKLRLKGIEEEEILPGFILCS
PDNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVQISALICLVDKKTGEKSKT
RPRFVKQDQVCIARLRAAGVICLETFKEFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacacagccccggattcgtgggagctggaggaggatgccgaggccccg
gctgccgcggcagagctcccaactgccttcgccgcactcaacgtcaacgccaagccgttt
gtccccaacgttaacgccccggtgtttgtaccaagcttccttcaagcaagtgccgtagaa
atcacggcttcagacggtgccactgacccaattgccagcatggaggtggcagaaacagcc
ggtatgcatccacattgtattccaggcactgcatgttcagctccagtggagaatggaggc
acagaggcagacatgaccacagaggaagagacgtgggagcagaaggaggagccgggggga
ggaggaggcggaggagacgaggacctgagtttaggaggagcctgtgaggagggcgcggcg
aggaacgaggacgaggagatgatggaggaggaagaggaggagatgcccatgcccaaagtg
gctccggcactgccagatgcccccaagaaagaacatgtgaacgtggtctttattggtcac
gtggatgctggaaagtcaactattggaggacagatcatgtacttaactggaatggtggaa
aagcgaaccctggaaaaatatgaaagagaagcaaaagaaaagaacagggagacatggtac
ctgtcgtgggctctggacacaaaccaggaggagagagacaaggggaagacggtcgaggtc
gggagagcttactttgagacggagaagaaacatttcaccatcctggatgcccccgggcac
aagagcttcgtccctaacatgattggtggagcgtcacaagccgacctggccgtcctggtg
atttcagcgagaaagggggagtttgagaccggctttgagaagggtggacagacacgggaa
catgccatgctggctaaaacggcaggagtcaagcatctcattgtcctggtcaacaagatg
gatgaccccactgtcaactggagcctagaaaggtatgaagagtgtaaggagaagctggtt
ccatttctaaagaaggtgggctttaaccccaagaaggacatccactttatgccttgctcc
ggactcacaggtgccaacctcaaggagcccgtaacggaatgcccctggtacacgggtttg
gcatttattccccatctggacagtttgccaaatttcaccagatccaacgatggaccggtc
agactacctattgtagacaaatacaaggacatgggcaccgttatcctggggaagctggag
tctggatgcatcagtaaagcccagcagctggtcatgatgccaaaccggcacacagtggaa
gtattgagcctgctgagcgatgatgtggagacagacgatgctactcctggggagaatctg
aagttgaggctgaagggcatcgaggaggaagaaatcctccctgggttcatcctctgtagc
cctgacaacctctgccactccggtcgcacctttgacgcacagatcgtcattattgagcac
aaatcaatcatttgtcctggttacaatgcagtccttcacatccacacctgcattgaagaa
gttcaaatctcagccttaatctgtctggtggacaaaaagacgggggagaaaagcaaaaca
cgaccacgctttgttaagcaggaccaggtgtgtattgccaggctccgggcagctggagtc
atctgcttagagaccttcaaagaattcccccagatgggacgattcacactgagagacgaa
ggcaaaactatcgccatcggcaaagtgctgaagctggtgccagaaaaggactaa
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