Etheostoma spectabile (orangethroat darter): 116670895
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Entry
116670895 CDS
T08457
Name
(RefSeq) antigen peptide transporter 2-like
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp02010
ABC transporters
esp04145
Phagosome
esp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116670895
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116670895
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116670895
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
esp02000
]
116670895
Enzymes [BR:
esp01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
116670895
Transporters [BR:
esp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
116670895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_30
AAA_21
SMC_N
AAA_22
AAA_16
AAA_29
AAA_15
RsgA_GTPase
nSTAND1
NTPase_1
AAA_PrkA
DUF6659
DEC-1_N
Motif
Other DBs
NCBI-GeneID:
116670895
NCBI-ProteinID:
XP_032357493
LinkDB
All DBs
Position
21:complement(10020329..10031793)
Genome browser
AA seq
713 aa
AA seq
DB search
MNQVSACGLFIIVFDAVLCLALWAGLVLLRCSSCGGLAGVWAFGAAKWAILHVFTSALTD
GKPQAVLRRLVALLCLLSPVFESGRIFTAPPSEAYTGPSPDLSVLLLGLVSSSLACVVWE
KGLGGDATKKKYNPKQDAWPLLMRMLKYFKPDTLYLIAAFGFLILGVICDTYIPLYQGNV
IDMLRGELLQTSFFYAVGQLALVSLGSALFSGCRGGIFMCTLTRLNRRLKHLLFHTLLQQ
DMHFFEENNPGRLSSRLHSDVDRMGRTVALNANVLVRSSVKTGLMLTVMLGLSWELTVLT
CIEMPLLAFLQNKYITLSKELKDQMQDCHAQNKDLAFQTFSGIHTVRSFKAEKDELRRFK
ESLDRMCAVQRRSRIYSSVFCLIRRLVSLGIKILMLVQARGLILSGHLSTGSLVSFFLYQ
KPMSINLKELLYCCGDTMSTVGVISKVFSYLDRTPQCETAGELAPEKLEGRVVFQNVTFT
YPSASEDKPALKSVSIELRPGQMTALVGPSGSGKSSCVSLLKRLYEPQGGQILLDGEPLH
HYNHKYLHQKMALVSQNPVLFSGSLIYNITYGLKDCPIEKVKEAAEKANADDFISKLEKK
YDTDIGECGGKLSEGQRQSIAIVRALVREPQVVILDEATSKLDVKVQHAVLQEVLARGRT
VLVVTHQLQTVEKADHIVFLEKGAVVEEGTHQELMAKRGRYHRLKEELFSELS
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagtgtcagcatgtggattattcattattgtgttcgacgcagtgctttgtttg
gcactgtgggccggactggtgttgctgaggtgctccagctgtggtggactggcaggtgtg
tgggcctttggagcagcaaagtgggccattctccatgttttcacatccgcgctgacggat
gggaagccccaggctgtgctccgccggttggtggccctcctctgccttctctctcctgtg
tttgaaagcggacggatctttacggcgcctccctcggaggcgtacacaggaccatctcct
gacctcagcgtactgctcctgggcctggtgtcctcgtcgctggcctgcgtggtttgggaa
aagggcctcggtggtgatgcaacaaagaaaaagtataaccctaaacaggatgcctggccg
ctccttatgagaatgctgaaatacttcaaaccagacaccctttaccttattgcagctttc
ggtttcctcatcttaggtgtcatctgtgatacatacatcccactgtatcaggggaacgtc
attgatatgctcagaggtgaactacttcaaaccagcttcttttacgcagttggccagctg
gcacttgtctctcttggaagcgctctgttctccggctgtagaggaggcatatttatgtgc
accctgaccagactgaacaggagactgaaacatctgctgtttcacaccctcctgcagcag
gacatgcacttctttgaggagaacaatcctggacgtctttcctcccgcctgcactcggac
gtggacaggatgggccgcacagttgcactgaacgccaacgtgctggtccgcagctcagtc
aaaaccggcctcatgctcacagtgatgctgggcctgtcctgggagctcactgtgctcacc
tgcatagagatgccgcttttggccttcctgcagaacaaatacatcaccttgtccaaggag
ctgaaagatcagatgcaggactgccacgctcagaacaaagacctggccttccagaccttc
agcgggattcacacggtccgaagctttaaggcagagaaagacgaactgagaaggtttaag
gagtctctggaccgcatgtgcgccgtgcagagacgttcacgcatctacagctcagtcttc
tgcttaatacgcaggctggtgagtctggggataaagatcctgatgctggtccaggcccga
ggtctcatcctgtcgggtcacctcagcactggtagtctcgtctccttcttcctgtaccag
aagcccatgtcaatcaatttaaaggagcttctgtattgctgcggagatacgatgtccacc
gtcggagtcatctccaaagtgttcagttatcttgacagaacaccacagtgtgagacggcg
ggagagttagctcctgagaagctggagggaagagttgttttccaaaatgtcaccttcacg
tatccctccgcttctgaagacaaaccagctttgaagtcggtgtctatagaacttcggccg
ggacagatgaccgccctggtgggtccctccggcagtgggaagtcttcctgtgtcagcctc
ctgaagaggctttatgaacctcagggggggcagatcctgctggacggagaaccgctgcac
cactacaaccacaagtaccttcatcaaaagatggccctggtatcccagaatcccgtgctg
ttttctggttcgctgatatacaacatcacgtacggcctgaaggactgccccattgagaag
gtgaaggaagctgcagagaaggccaacgctgacgacttcatctccaaactggagaagaaa
tatgacacagatataggtgaatgtggcggcaaactttcagagggacagaggcagagcatc
gccatcgtccgagctctggttcgagagccgcaggtcgtcattctggacgaggctaccagc
aaactggatgttaaagtgcagcacgccgtgctgcaggaggttctggctcgggggcggacc
gtcctggtggtgactcatcagctgcagactgtggagaaggcggatcacatcgtcttctta
gagaagggagccgtcgtggaggaggggacgcaccaggaactcatggccaagagaggacgc
taccatcgtctgaaagaggaactcttctctgaactcagctga
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