Etheostoma spectabile (orangethroat darter): 116670981
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Entry
116670981 CDS
T08457
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116670981 (rnf40)
Enzymes [BR:
esp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116670981 (rnf40)
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
116670981 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
BRE1
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-RING_5
OVT1
zf-rbx1
SpoIIE
Motif
Other DBs
NCBI-GeneID:
116670981
NCBI-ProteinID:
XP_032357669
LinkDB
All DBs
Position
21:21716292..21739087
Genome browser
AA seq
997 aa
AA seq
DB search
MSGAGGGKRPSGGDSPPGPPEKKSKKEEKTTTTLIEPIRIAGVSSTEEMDMKVLQFKNKK
LCERLEQRQTMEDELREKIEKLEKRQATDDTTLLIVNRYWSQLDENVHVLRKRIEPDAPV
TSTPAPPAPPLPEPTPLEEDSVILASPTSSVPPPPLPEAQNEGEQAEQQQEDHQEEQKLP
PPPTGSEELVTPTKLPQDSTTDASPPPAPVSDNAKSFLATLEHSSEEELTLNLQDRMQFS
KEAIACLVCVFDRLHSRIDNMCKQVQAAACEDDSQSDIINVNHTLLEENNRLRDLATLLQ
GRHHKMSMEYNELVDKVTSSETKVSEMETTVEDLQWDIEKLRNREQKLNKHLAEAMEQLK
SGYSSTGSSGGLPGGQITLNIQKFESLNAELEHNQELANSRMAELEKLQVELQEAVRESE
KLKMDLRNIPEEVVKETLEYKCLQSQFSLLYNESLGVKTQLDEARALLLTAKNAHLRQIE
HMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREMRHLIS
SLQNHNLQLKGDVQRYKRKLRETQMEINKLRCQSGDTGVLILEETTSDSIEVKKEEDEDQ
EEEEERRKELERQRAREREREREAERERERERERQRSDELKRKDSDTLKMLRVELKKAQE
SQKEMKLLLDMYKSAPKEQRDKVQLMAAERKSKAEVDELRMRVRELEERERKESKKLADE
DALRKIRVAEETIEHLQKKLAATKQEEEALLSEMDVTGQAFEDMQEQNSRLLQQLREKDD
ANFKLMSERIKSNQIYKLLKEEKEELADQVLTFKTQVDAQLLVVQKLEEKEGVLQSTLAA
LEKELAVRTQALELNKRKAVEAAQLAEDLKVQLEHTQAKLKEIQVSVAENRTARERESSN
LKRAQEDLSRLRRKLEKQKKVEVYSDADEILQEEINQYKAKLRCPCCNTRDKETVLTKCF
HVFCYECLKMRYDTRQRKCPKCNCAFGANDFHRIYIT
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgctgggggaggaaaacgtccctcaggaggggacagcccccctggcccacct
gagaagaaaagcaaaaaagaggaaaagaccaccaccactcttattgagcccatacgcata
gctggagtctcctctacggaggaaatggatatgaaggtcctccagttcaagaataagaag
ctgtgtgagcgcttggagcagaggcagacaatggaggatgagttacgagagaaaattgag
aagctggaaaagagacaagccaccgatgacacaaccctgctgattgtcaaccgctactgg
tcacagttggatgaaaatgtgcacgttctacgcaaacgtattgaaccagatgctcctgtg
acatctacccccgccccaccagcaccccctctccctgaaccaacaccactggaggaagat
agtgtcattttggcgtcgccaacttcttccgtgcctccacccccactcccggaggctcag
aacgagggggagcaggccgaacagcagcaggaggatcatcaagaagagcagaagctgcct
cctcctcctactgggtcagaagagttggtgacacccacaaagctgccacaggactcaaca
acagatgcatcgccgccccctgctcccgtgagtgacaatgccaagagtttcttggctaca
ttggagcacagcagtgaagaggaactcaccctgaatctccaagaccgcatgcagttcagc
aaggaagctattgcctgtttggtttgtgtttttgacaggctgcacagccgcatcgacaac
atgtgcaagcaagttcaggctgcagcatgtgaagatgatagccagtccgacatcatcaac
gtgaaccacactctactggaggaaaacaatcgactgcgagacctggcgactctcctgcag
ggccgacaccacaagatgtccatggagtacaatgagttagtggacaaggtgaccagctcg
gagaccaaagtgtctgagatggagacaacggtggaggacctgcagtgggacattgagaaa
ctccgcaatagggaacaaaagctcaacaaacatctggccgaagccatggagcagctaaag
tctggatacagcagcaccggcagctcaggtgggcttcctggaggccagattacactgaac
attcagaagttcgagagcctcaatgcagagttggagcacaaccaggagttggctaatagc
cgcatggcagagttagagaagcttcaggtggagctccaggaggctgtgcgggagagtgag
aagctcaagatggacttgcgtaatattccagaagaggttgtgaaggagactctagagtac
aaatgtctgcagtcccagttctccctgctgtataatgagtcccttggggtgaaaacccag
ctggatgaggcacgggcactcctgctcactgccaagaacgcccacctccgacagatcgag
cacatggagagtgatgagctgtcccttcagaagaagctgcggacggaggtcatccagctg
gaggataccctggctcaggtgcgcaaagagtatgagatgctgcgcatcgaatttgagcag
aacctggcagccaacgagcaagcaggaccaatcaacagggagatgcgacacttaatcagc
agccttcagaaccacaacctgcagttgaaaggcgatgtgcagcgctataagaggaagttg
cgggaaacgcaaatggagatcaataagttgcgctgtcaaagtggcgacacaggggttcta
attctagaggagacaacaagtgacagcatcgaagtgaagaaagaggaggatgaggaccag
gaggaggaagaagagaggaggaaggagctggagagacagcgggcccgggagagggagagg
gagagggaggctgaacgagaaagggagcgtgagagagagaggcagcgcagtgacgagctg
aagaggaaggactctgacacgctgaagatgctcagagtagaactcaagaaagcccaagag
tcccagaaagagatgaagctcctgttggacatgtataagtctgctccaaaggagcagagg
gacaaagtgcaactcatggcagctgaacgaaaatctaaagctgaggtggatgagttgagg
atgcgagtgagagagctggaggaaagggagagaaaggaaagcaagaagctggctgatgaa
gatgccctcaggaagattcgagtggcagaagagaccattgagcatctgcagaaaaaactt
gctgccacgaagcaggaggaggaagccctgctgagtgagatggatgtgaccggccaggcc
ttcgaggacatgcaggagcagaacagtcgcttgttgcagcagttgcgggagaaggacgac
gccaatttcaagctgatgagtgagcggatcaaatctaaccagatctacaagctgctgaaa
gaggagaaggaggagttggctgaccaagttctcacattcaaaactcaggtggatgcccag
ctgctagttgtgcagaagctagaggaaaaagagggtgtcctccagagcacacttgccgct
ctggaaaaagagctggctgtccggacacaagcactagaactcaacaagaggaaggcggtg
gaggctgcccagctggcagaggacctgaaggtgcagctggagcacacgcaggccaagctt
aaggagatccaggtctctgtggctgagaaccgcaccgcccgggagagggagagcagcaac
ctaaaacgagcacaggaggatctgtcgaggctgaggcggaagctggagaaacagaagaag
gtggaggtgtactctgatgctgacgagatcctgcaggaggagatcaaccagtacaaggcc
aagctgcgctgcccctgctgcaacacacgagacaaggagacggtgctcaccaagtgtttc
cacgtattttgctacgaatgtctgaagatgcgttacgacacccgacagaggaagtgcccc
aagtgcaactgtgcttttggagccaacgactttcaccgcatctatatcacctaa
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