Etheostoma spectabile (orangethroat darter): 116671039
Help
Entry
116671039 CDS
T08457
Name
(RefSeq) LOW QUALITY PROTEIN: crossover junction endonuclease EME1-like
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03440
Homologous recombination
esp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116671039
03460 Fanconi anemia pathway
116671039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esp03400
]
116671039
DNA repair and recombination proteins [BR:
esp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
116671039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EME1-MUS81_C
ERCC4
Motif
Other DBs
NCBI-GeneID:
116671039
NCBI-ProteinID:
XP_032357819
LinkDB
All DBs
Position
21:734095..740494
Genome browser
AA seq
540 aa
AA seq
DB search
MCSSSDSTSDLDEELPVFDFLQPGRRLSQAPQSPPEKPAFSPAKGDVDARTRAPDVMMIS
SDSDDDAPYVPLAQRLKQRQDNVIRASSAVTNGKNAEHSSSSNLASLPLSCQNGFSEIER
PLSIHQGISDGPDEMAAFPRRRLLPTHTSPAKRKPAKRTAEETQGSREEVLGRRLARTGQ
QSNKEVLKQEQERQRAERRALAEAAKALRPEECIKHMVVTVDPALLQLEGGGTLLASVQA
LGCSCAIXKQPLPRSVSWMRRTPCAQPEEAVCVPEAQVVMQMTVDDFITLIHGHVQEERH
GCGPTLTSWVQEQQRRRPGNILSLAVIDLEKYFRSQKSQSQKRFREAVVGEQRGGGNVRR
KRKSGVAALRPEVSRVEVEEAVVHLQLHTGVSVRFLSTWKDFTDHITMTTKAVAEAPFKR
EREETSFSFYLESEWAGGQRVDRAGKGLLQVWKRQIQQLNRVSPDMASAILAAYPSPRRL
HQAYGVCETEGERISLLSDLLIRRGEGVTATTRRVGPELSKRLFLMMTSRDPQQTLDATV
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagctccagtgactccaccagcgacctcgatgaggagttgcctgtgttcgacttc
ctccagccgggtcgacgcctcagccaagccccccagagccccccagagaaaccagccttt
tccccagcgaagggcgatgtggacgcacgtacacgagcgcctgatgtaatgatgataagc
agcgattctgatgacgatgcaccttatgtccctttggcacagagactcaaacagagacaa
gacaatgtgattagggcctcctccgctgtcactaatgggaaaaatgctgagcactcttct
tcatccaacctggccagtttgccgctctcttgccagaatggcttttcagagattgagcgt
ccccttagcatccaccaggggatctcagatggcccagatgagatggcagctttccctcgg
cgacggctgcttcccacccacacctctcctgccaagaggaaacctgccaagcgcacggcg
gaggagacccagggctccagggaggaggttctggggcggaggctggccaggacgggacag
cagagcaacaaggaggtgctgaagcaggaacaagagagacagagagcagaaagaagagct
ctggcagaggctgccaaggccttgaggccagaggagtgtatcaagcacatggtggtgact
gtggacccagccctcttacagctagaaggaggcgggacgctgctggcgtcggtgcaggct
ctgggctgtagctgcgccatanggaaacagcccctcccacgcagtgtcagctggatgagg
aggactccctgtgcacagccagaggaggcagtgtgtgtcccggaggcccaggttgtgatg
cagatgacagttgatgacttcatcactctgatccacggccacgttcaggaagagaggcat
ggctgcggtccgactctgacgtcctgggtgcaggagcagcagaggcgtcgccccggtaac
atcctcagcctggcggtaatcgacctagagaaatacttcaggtcccagaagtcccagagc
cagaagcggtttcgggaggcggtcgtgggtgagcagcgggggggaggaaacgtgaggagg
aaaaggaagagcggtgtagcggcgctgcgacccgaggtgtcccgggtggaagtagaggag
gcagtggtgcatctgcagctacacactggcgtctctgtccgcttcctgtcaacctggaag
gacttcacagatcacatcaccatgacaaccaaagcggttgcagaagcccctttcaagcgt
gagagggaggagacgagcttctccttctacctggagagtgagtgggcgggggggcagcgg
gtggacagagcggggaagggactgctgcaggtgtggaagagacagatccaacagttgaac
agagtgagtccagacatggcctccgccatcctggcagcgtatccctcgccccggcgtctc
catcaggcgtacggtgtgtgtgagacggagggcgagaggatctcgctgctgtcggacctc
ctgatccgcaggggggagggcgtcaccgccacgacccgccgcgtcggccccgagctctcc
aaacgcctcttcctcatgatgacctcgcgtgatcctcagcagactctggacgccaccgtg
tga
DBGET
integrated database retrieval system
