Etheostoma spectabile (orangethroat darter): 116671085
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Entry
116671085 CDS
T08457
Name
(RefSeq) neurobeachin-like isoform X1
KO
K24183
neurobeachin
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116671085
Membrane trafficking [BR:
esp04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
116671085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Laminin_G_3
WD40
Neurobeachin
WD40_Prp19
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
SPO22
Motif
Other DBs
NCBI-GeneID:
116671085
NCBI-ProteinID:
XP_032357916
LinkDB
All DBs
Position
3:complement(20134096..20420485)
Genome browser
AA seq
2931 aa
AA seq
DB search
MTSERPPVTMPGSMSLSDRQPPPGHRQHAAAVSAATGETMMMSGSGSVVLPAGIINPSVP
IRNIKMKFAVVIGLIQVGEVNNRDIVETVLNLLVGGEFDLETNFIIQDAESIGCMVELLA
HCDVTCQAEIWSMFTAILRKSVRNLQTSTEVGLIQQVLLKMSSVDDMIADLLVDMLGVLA
SYSITVTELKLLFSMLRGEGGLWPKHAVKMLSVLNQMPQRHGPDAFFNFPGRSAAAIALP
PIAKWPYQNGFTFNTWFRMDPLNNINVDKDKPYLYCYRTSKGIGYSAHFVGNCLIVTSLK
SKGKGFQHCVKYDFQPRKWYMISIVHIYSRWRNSEIRCYVNGQLVSYGDMAWHVNTNDSY
DKCFLGSSETADANRVFCGQLGAVYVFSEALNPAQIFAIHQLGPGYKSTFKFKSESDIHL
AEHHKQVLYDGKLASSIAFTYNAKATDAQLCLESSPKENASIFVHSPHALMLQDVKATVT
HSIHSAIHSIGGIQVLFPLFAQLDYHQLNDSQVEPTVCATLLAFLVELLKSSVAMQEQML
GGKGFLVIGYLLEKSSRGHITRAVLEQFLSFAKYLDGLTHGAPLLRQLCDHILFNAAIWI
HTPAKVQLSLYTYLSAEFIGTATIYNTIRRVGTVLQLMHTLKYYHWAVNPADSSGISPKG
LDGPRPTQKEIISLRAFMLLFLKQLILKDRGVKEDELQSILNYLLTMHEDENLHDVLQLV
AALMSEHPASMIPAFDQRNGIRVIYKLMASKSEGIRVQSLKVLGYFLKHLGHKRKVEIMH
THSLFTLLGERLMLHTNTVTVTTYNTLYEILTEQVCTQVVHKPHPEPDSTVKIQNPMILK
VVATLLKNSTPSPELMEVRRLFLSDMIKLFSNSRENRRCLLQCSVWQDWMFSVGYINPKN
SDEQKITEMVYNIFRILLYHAIKHEWGGWRVWVDTLSIAHSKVTYEAHKDYLAKMYEEYQ
RQEEENIKKGKKGLVSTISGLSAQASGINGAIEIREMDDNSQTPESEKDYESADSHNLLA
EGKGPEMGLRGTEATVDGVRVEVHHLLVDIKAEKVEATEVKLDDMETLGVSENGALVEVD
SLLDNVYCAAVEKLNSNVNSVLLPKGSMVDHNAPPLITLDDEKDSIPNSNNFLFGKVAGS
MGDELLPDLSTVAPLVLPSPEPSVHTSAADELGLLAHMTNSSELGSLPSILEQDEFELQA
AFKGINSMASTEAEVSSESPEVHVVSVSAPSEGDPSAVKTGSAGDSTINTSDTDDGKNKE
MKKIQTTSTTQSLHGRLASQMERDIRVDLGFRGTPMTEEQRQQFSPGPRTTMFRIPEFKW
STMHQRLLTDLLFSLESDVHVWRSHSTKSVMDFVNSNENIIFVHNTIHLISQMVDNIIIA
CGGILPLLSAATSPTTELENIEATQGMSSETAITFLSRLMVMVDVLVFSSSLNFSEIEAE
KNMSSGGLMRQCLRLVCCVAVRNCLECRQRDRGLKYSITNNNKTHENLQNAVTYNKTAIE
TVPSNLSPIKDRDRLLQDVDISRLRAVVFRDVDDSKQAQFLALAVVYFISVLMVSKYRDI
LEPQRETARISQSGRSMRQEINSPTSTETPFDSSKDRPAPSDLHNRSSIHHTDSGIGEEQ
VASVLNGSDLDNSAGVLISTLSSEVKKSQESVSESLSVQVLRPTSSIISISQPKKGINVK
EILKSLVSAPVEGMEAGLEPVSYPDPAANAQAMLPMQFHSFDRSVVVPVKKTSPGSLAVN
TVGSSSTSAGPTAGSTPNIFAATSATPKSMINTTGATDATASTSSSSSFVNGATSKNLPA
VQTVAPMPEDTEESMSAFCEVDQCPLRQGLTPPELKPFSSLTGLQAASRDAGQCLSITTK
LERALEKVAPLLREIFVDFAPFLSRTLLGSHGQELLIEGLVCMKSSTSVVELVMLLCSQE
WQNSIQKNAGLAFIELINEGRLLCHAMKDHIVRVANEAEFILNRQRAEDVHKHAEFESNC
AQYAADRKEEEKMCDHLISAAKHRDHVTANQLKQKIVNILTNKHGAWGTLAQSQLHDFWR
LDYWEDDLRRRRRFVRNPFGSTHLDVTCKSLQEYGTEEDKVVKSKKVFRSQTVASQNPET
ELVLEGDEDAVSLLQEKEMDNLGARFLPQVFISRGPVVLSSPAQLVAPVLVARGTLSITT
TEIYFEVDEDDPAFRRAEPEVLAYTEGLHGKWMFSEIRAVFSRRYLLQNTAMEVFMANRT
SVMFNFPDQATVKKVVYSLPRVGVGTSYGLPQARRISLATPRQLFKSSNMTQRWQRREIS
NFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYDSEELDLTLPGNFRDLSKPVGALNPKRA
AFYAERYETWEDDQTPPCHYNSHYSTAASTLHWLVRIEPFTTFLLSANNNKFDHPDRTFS
AIARSWRNCQRDTSDVKELIPEFYYLPEMFVNSNGYHLGMREDRTMVCDVDLPAWAKKPE
DLVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAVRALNVFHYLTYEGSVKLDSITDP
PLREATEAQIQSFGQTPSQLLIEPHPPRSSAMHLCFLPQSPLMFKDQMQQDVIMVLKFPS
NSPVTHVAANTLPHLTIPAVVTVTCSRVFAVNRWHNTVGLRGAPGYSLEQAHHLPIEMDS
LVANNTGSNKRQITDLVDQSIQITTHCFVVTADNRYILVCGFWDKSFRVYSSETGKLTQI
VFGHWDVVTCLARSESYIGGDCYIVSGSRDATLLLWYWSGRHHIIGDNPNNSDYPAPRAV
LTGHDQEVVCVSVCAELGLVISGAKEGPCLVHTITGDLLRALEGPEHYRCPRLISVSSEG
HCIINYERGCFCNFSINGKLLAQMEVNDSTRAILLSSDGHNLVTGGDNGVVEVWQACDFK
QLYVYPGCDAGIRAMDLSHDQRTLITGMASGSIVAFNIDFNRWHYEHQNRY
NT seq
8796 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcgagagaccgccggtgacaatgccggggtcgatgtcgctctcggaccgacaa
cctcctccaggtcacaggcaacacgcggctgcagtctccgctgccaccggcgagacaatg
atgatgtccggttcaggttcagtggtgctcccggctgggattatcaatccatcggttcca
atccggaatattaaaatgaaatttgcagttgtcatcggactgatccaggtcggagaggtt
aacaaccgggatattgttgaaacggtgctgaatttgttggtgggtggtgagtttgatctg
gagacaaacttcatcatccaggatgcggaaagcatcggctgcatggtggagctgttggcg
cactgtgacgtcacctgccaggctgaaatctggagcatgttcaccgccatccttcggaag
agtgttcggaacctgcaaacgagcactgaggtgggcctcatccagcaggtgctgctcaaa
atgagctctgtggacgacatgattgcagacttgctggtggacatgctgggcgtgctggcc
agctacagcatcacagtgacggaactgaaattgctcttcagcatgctacgaggggaagga
ggcctctggccgaagcatgcagtcaaaatgttgtcggtgctgaaccagatgccccagaga
cacggcccagatgccttcttcaactttcctggtcgcagtgcagcagccattgctttacct
ccaattgccaagtggccttatcagaatgggtttacatttaacacctggttcaggatggat
cccttgaataacatcaatgttgacaaggacaaaccatatctctactgctatcggaccagc
aagggcattgggtactctgcacattttgtcgggaactgcttgatcgtgacatcactcaag
tccaaaggaaaaggtttccagcactgtgtgaagtatgattttcagcccaggaagtggtac
atgatcagtatagttcacatctacagccgctggaggaacagtgaaatcagatgctatgtt
aacggacagctcgtttcttacggagacatggcatggcacgtcaacacaaatgatagttat
gataagtgcttcctcgggtcctcggagacagcagatgcaaaccgagtgttctgcggccag
ctaggagctgtctacgtgttcagtgaagccctcaatcctgcgcagatatttgcaattcat
cagctaggaccaggctataagagcacatttaagttcaagtcagagagtgatatccactta
gcggagcatcacaagcaggtgttgtacgacggtaagttggccagctccatcgccttcacc
tataacgccaaggccactgacgcccagctctgcctggagtcctcacccaaagaaaacgcc
tccatctttgtgcactcaccgcacgcccttatgctacaggatgtgaaagccacagtgact
cactccatccacagtgccatccattccattggtgggatccaggtgctcttcccgctcttc
gctcagctggactaccatcagctgaacgacagccaggtggaacccactgtttgtgccact
ctcctagcctttctagttgagctgctgaaaagctctgtggccatgcaggagcagatgctg
ggaggaaagggctttttggtgattggatacctgctggagaagtcatcccgtggacacatc
accagggctgtactagagcagttcctctcctttgcaaagtatctggacgggctgacacat
ggggcaccgctgctgaggcagctgtgtgaccacatcctgttcaatgctgccatctggatc
cacacccccgccaaggtacagctatctctgtacacatacctttctgcggagttcatcggc
acggcaaccatctacaacacaattcggcgagtgggcacagtgcttcagctcatgcatacg
ctaaagtactaccactgggccgtcaaccctgcagacagcagcggcatctcaccaaagggt
ctcgatggtccaaggccgacccagaaagaaatcatttctctgcgggcattcatgcttctc
tttctcaagcaactcatcctgaaggaccggggtgtgaaggaagatgagctgcagagcatc
ctaaactatctgttaacaatgcatgaggatgagaatctgcatgatgtgttgcagctggtg
gcagccctcatgtctgagcatccagcctctatgatccctgcttttgaccagaggaatgga
atacgggtaatctacaagctcatggcctcaaagagtgaaggcattcgagtacaatccctc
aaagtccttgggtacttcctcaagcatttgggccacaagaggaaggtggagatcatgcac
acacacagcctcttcactctcctgggagagaggctcatgctgcacaccaacactgtgacc
gtgacgacctacaacactctgtatgagattctgacagagcaggtgtgcacacaagtagtt
cacaaacctcatcctgaacccgactccactgtcaagattcagaacccaatgatcctcaag
gtggtagccacgttattgaagaactccacccccagcccggagctgatggaagttcgtcgg
ctcttcctttcagacatgatcaaactgttcagcaacagccgggagaacaggcggtgtctg
cttcagtgctccgtatggcaggactggatgttttctgtcggctacatcaaccctaaaaac
tctgatgagcagaagatcactgagatggtgtacaacatctttcgtattctgctctaccat
gccatcaagcatgagtggggaggatggcgcgtgtgggtggacacactctctatagcccac
tctaaggtgacatacgaggcacataaagactacttggctaagatgtatgaggagtaccag
cgtcaggaggaggagaacattaagaaagggaagaagggtttggtcagcaccatctccggt
ctgtctgctcaggcgtcgggcatcaatggcgcaattgagatcagagaaatggacgacaac
tcccagacacctgagagcgagaaggactacgagagcgcagactctcacaacttgctggct
gaaggcaaggggcccgaaatgggtctcagagggactgaggctacggtagatggggtcagg
gtcgaagttcaccaccttctggtggacatcaaggctgaaaaggtggaggctacagaggtt
aagctagatgatatggaaacgctgggagtatctgagaacggagccctggtggaggtggac
tctctgctggataatgtttattgtgctgcagtggaaaagctcaacagcaacgtcaacagt
gtgttgttgccaaagggcagcatggttgaccacaatgcaccccctctcattaccctagat
gatgaaaaggacagcatccccaacagcaacaacttcctgtttggcaaggtggcaggcagc
atgggagacgagcttttgccggatctcagtacagttgcgcctctggtgctgcccagccca
gagccttcagtccacaccagcgccgcggatgaactgggccttctcgctcacatgacaaac
agctctgagctgggctccttacccagcatcctggagcaggacgagtttgaactacaggca
gccttcaagggcatcaactccatggctagtactgaggccgaggtctcctccgaaagccct
gaggtccacgtggtctccgtttccgcgccgtctgaaggggacccctcagctgttaagacc
ggcagtgcaggagattccacaatcaacacctcggataccgatgacggcaaaaacaaggag
atgaagaagattcagacgacttccaccacacagagtctgcatggccgcctagcctctcag
atggagagggacattcgtgtggatttgggcttccgggggactccgatgaccgaagaacag
cgacagcagttcagccccggcccacgcaccaccatgttccgcatcccagagttcaaatgg
tccaccatgcaccagagactgctcactgatctgctgttttcactggagagcgacgttcac
gtctggaggagccactccaccaaatctgtcatggactttgtgaatagtaatgagaacatc
atatttgtccacaacaccatccacctcatctcccaaatggtagacaacatcattatcgct
tgtggagggatcttgccccttctctcggctgccacctctcctactacggagttggagaac
atcgaggcaacacagggcatgtcctcagagacggccatcacgttcctctcccgtctcatg
gtgatggtagacgtgttggtgttctccagctccctcaacttcagtgagattgaggctgag
aagaacatgtcctccgggggcctgatgcgtcagtgcctcagacttgtgtgttgtgtggct
gttaggaattgtctcgagtgcaggcaaagagacagaggactcaagtattccattaccaac
aacaacaagactcatgaaaacctgcaaaatgctgtgacttataacaagacagccatagag
actgtccctagtaacctgtctcccatcaaggaccgtgatcgccttttgcaggatgtggac
atcagtagactgcgcgccgtggtgtttcgcgatgtggatgacagcaagcaagcccaattc
ctggctttagctgtggtgtacttcatctctgtcctcatggtctccaagtaccgcgacatc
ctggaaccccaacgagagactgccaggataagccaatcaggccgcagcatgcgtcaggag
atcaactcgccaacaagcacagaaacaccatttgacagcagtaaggaccgtcctgcgcca
tcagaccttcacaacagaagctccattcaccacacagactctggtatcggagaggagcag
gtagccagcgtcttgaacgggtctgacctggataacagcgcgggagtgctcatatctacg
ctgtcctcagaggtgaagaagtcccaggagagtgtgtctgaatcactcagcgtgcaggtg
ctgagaccaacctcctccattatcagcatcagccagcccaaaaagggcatcaatgtcaag
gagatactgaagagcctggtgtcagctccagtggagggcatggaggccgggctggagcct
gtgtcctacccagaccctgctgccaacgcccaggccatgctgcccatgcagtttcactcc
tttgacaggagtgtggtggtgcctgtgaagaaaacctcccctggcagcctcgcagtcaac
acagtgggaagcagcagcacatctgctgggccgacagctggcagcacccccaacatcttt
gctgccacctctgccacccccaaaagcatgatcaacaccacgggagcaactgatgcaacc
gcctccacctcctcttcctccagttttgtcaacggagccaccagtaagaacctaccggcc
gtgcagacggtggcccccatgcctgaagacacagaagaaagcatgagtgccttttgtgaa
gtggaccagtgtccactgcgccagggactgacacctcccgagctcaaaccctttagctcc
ctgacaggattacaggcagcctccagagatgcaggccagtgtcttagcattactacgaag
ctagagagggctttggagaaggtggcacccctgctgagagagatcttcgtggactttgca
cccttcctgtcacgcaccctgctgggcagccatgggcaggagctgctcatagaaggtctt
gtgtgtatgaagtcaagcacctcagtggtggagctcgtcatgctgctttgttctcaggaa
tggcagaactccattcagaagaacgctggcctggctttcattgagctaatcaacgaagga
aggttgctttgccacgccatgaaggaccacatagttcgggtagccaacgaggccgagttc
atcctgaacagacagcgagccgaggacgtccacaaacacgcagagtttgagtccaactgt
gcccaatatgctgctgacagaaaagaagaagagaagatgtgtgaccacctgatcagtgct
gctaaacacagggaccatgtgacagccaaccagttaaagcagaaaatcgtcaacatcctc
accaacaagcatggtgcctgggggacgctggcccagagtcagctgcacgacttctggcgt
ctcgactactgggaagatgacctgcggcggaggcggagatttgtcagaaacccatttggc
tccacccacttagatgtcacatgcaagtcactgcaggagtatggcacagaggaggacaag
gtggtcaagtctaagaaagttttccgcagccaaactgtggccagccagaaccccgagaca
gagctggtgctggagggagacgaagatgccgtcagcctgctgcaggagaaggagatggac
aacctgggtgcacggttccttcctcaagtgtttatctccagaggcccagtggtcctgagc
agcccggcccagctggtggcccccgtgctggtggcccgggggactctgtccatcaccacc
acggagatctacttcgaggtggacgaggatgaccccgccttcaggagggccgagccagag
gtcttggcatacactgagggtttacatgggaagtggatgttcagtgagatccgggcggta
ttctccagacgctacctcctgcagaacacagcgatggaggtctttatggccaacagaaca
tcagtcatgttcaactttcctgaccaggccacagtaaagaaagtggtctacagtcttcct
cgagtgggggtgggcaccagctatggacttccacaagcaaggcgcatatccctggccact
cctcgccaacttttcaaatcctccaacatgacccagcgctggcagaggagagagatctcc
aactttgagtacctcatgtttctcaacactattgcagggaggacatacaacgacctgaac
cagtacccggtctttccctgggtcctcaccaactatgactcagaggagctggacctaacc
ctgccagggaacttcagagatctctcaaagcctgttggtgctctgaatccgaagcgtgca
gcattctacgctgaacgttacgagacttgggaagatgaccagacgccaccttgtcattac
aactcccactactccacagctgcctccaccctgcactggcttgtcagaatagagcccttc
accacgttcctcctaagtgccaataacaacaaattcgaccaccctgaccgcaccttttca
gccatcgcccgctcctggagaaactgtcagagggacacctccgacgttaaggaactgatt
cctgagttctactacctcccggagatgttcgttaacagcaacggctaccatctgggaatg
agggaggacaggaccatggtctgtgacgtggacttgccagcctgggccaagaagcctgaa
gaccttgttaggatcaacaggatggccctggaaagcgagtttgtgtcatgtcagctgcat
cagtggattgaccttattttcggctacaagcagcgaggcccggaggcggtgcgtgccctc
aacgtctttcactacctgacttacgagggctccgtcaagctggacagtatcaccgaccct
ccgctcagagaggccacagaggcccagatccagagctttggacagacgccatctcagttg
cttattgagccacatcctccacgcagctctgccatgcacctgtgtttccttccacagagt
cctctcatgttcaaggaccagatgcagcaggacgtcatcatggtgttgaagtttccgtcc
aattcgccggtaacgcacgtggccgccaacaccctgccccacctcaccatacctgccgtg
gtcaccgtcacctgcagccgcgtattcgctgtcaaccgatggcacaacaccgtcggtctc
cggggagcaccaggctactctcttgagcaggcccatcacctgcctatagagatggactct
ctggttgccaacaatactggaagcaacaagcgccagatcacagacctagtggaccagagc
atccaaatcaccacacactgttttgtggtgacagctgacaaccgctacatactggtgtgt
ggcttctgggacaagagctttcgtgtgtactcctccgagacaggcaagctgacccagata
gtttttggccactgggacgtagtgacatgtctggccagatccgagtcttacatcggagga
gactgctacatcgtctctgggtccagggatgctacacttctgctgtggtactggagtgga
cggcaccatattatcggcgacaaccccaataacagtgactacccagcaccacgagcagtt
ttgacgggccatgaccaagaagttgtgtgtgtgtcagtctgcgcagagctgggcctggtc
atcagcggagccaaagagggtccatgtctggtccacaccatcacaggggacctgctgcgg
gctctggaggggccagagcactatcggtgcccacggctcatctcagtgtccagtgagggc
cactgcatcatcaactatgagaggggctgcttctgcaacttcagcattaatggaaagctg
ctggcacagatggaagtcaatgattccaccagggctattctcctgagcagtgatggccac
aacctggtcacaggtggggataatggcgtggtggaggtgtggcaggcctgtgacttcaaa
cagctctacgtctaccctggctgtgatgctggcatccgagccatggacctatcacacgat
caaaggactttgatcacaggcatggcctctggcagtatcgtggcatttaacattgatttc
aaccggtggcactacgagcatcaaaacaggtactga
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integrated database retrieval system
