Etheostoma spectabile (orangethroat darter): 116671094
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Entry
116671094 CDS
T08457
Symbol
tdrd1
Name
(RefSeq) LOW QUALITY PROTEIN: tudor domain-containing protein 1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
esp03036
]
116671094 (tdrd1)
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Gene silencing
piRNA pathway
116671094 (tdrd1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
zf-MYND
MYND_ZMYND11_ZMYD8
zf-HIT
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
116671094
NCBI-ProteinID:
XP_032357920
LinkDB
All DBs
Position
21:18340220..18361102
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AA seq
1189 aa
AA seq
DB search
MCNTXYLRHQHVHSVAAMYRSFSPNLVRPNQPLRKPSSTPVALISTLASPRLPTVPNATP
VRPASGAIGDGISRDQSAVLGSIPPALTVYFCNFCGQQGNFRCKRCKKTPYCSVVCQTED
WKAHRHMCKSIDLEPEKETTKETTVSLVTGDRAGLVESKHGDASSLQRVYLKDLHITKII
KGTDIQATVVEFYSPGRFFLLAQSPELLEALQYISTELQKTNSCPSMRTYVPHVGEVCAV
QFSCDLNWYRGLVQTLAADQKTANILYIDFGNEEHVPVDRIKPLAANIQPYCPCAMECHI
AGVVPVTGNWSGECRVSVKQLLVGKIVTVRLVESLENGRIHAVDILLSMGKKLSTFLLEQ
GYAAEETVNETPTLQEINAMVSASLDNFMRLSDGKDDNTWAQPPEPLKLAVGDSFSVVVT
HLQSPNEIIVQKVENAGVIQELQLKLREHCCQAPAPQNFRPAPGTVCCAQFSEDKQWYRA
KVLAYASEERVCVGYLDFGNSEEVDLGNLQPINTLLLALPMQAMACGLAGVQPVGESWSE
DCLLALQRRVSNRILRLKIQGAHEGKALVAMIDEASDPQANVAELLISAGFAAPAPVPTS
SDQQADKTATAAAEPPGVPAPACEPLVWSFSELPCDGQTVALLASVVENPQEFYCRIDNP
TDHQRLIELGAELKQHCAAEASPFVPKVGEPCCAMFPGNKEWYRAIVNELSRDVSVNFVD
YGYSMKVGKDQIRSITPRLLMLPFQAIRCWLTGVEPLGSEWSSEALLWFQSLVDGKQLSA
RVLCATEQGYGIELESKGQNVAAALISEQLAKVPGAVPKETHATTGSEQKHQENIQGNEN
SQMPVQASDQTGTSSKKIPSEAPSFPVDWKTVELPLNDTFQPCIAAFTSPSLFYLLVPSQ
VDQQKLQEVMMELVAYCSNIRASLSSTVLSRPVPGAACCAQFSADNNWYRAVVLEVGENE
MSVIYADYGNSEKVPFSRVLPITKHLLQLPFQITRCTLTGKEHFPAELPEEVLQMFQSQL
LNGVLATVQSFDDSVNVLSLTLPTERGGGNLSTMILDTLQNQASSKPCSPTTRKADQTDS
STSTASPTVVPDCPPPMVIPETQKGLKHTTATTGITIIPEQEPQTTQQKTNTSAEDPVQK
IIAQMEPPCKIDPQAPGCCCQNLMTKIDHLEHLVQLQLSLIKQLVGQTK
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaacacancttaccttcgccaccaacacgtgcattcagttgccgccatgtaccgc
tcgttttctccaaacctggttcgacctaaccagcccttgaggaaaccatcatcgaccccc
gtggctcttattagcacattggcttctccaagacttcccaccgtgcccaatgcgacacct
gtgcgcccagcgtcaggcgccattggagacggaatcagcagggatcaatctgcagtgtta
ggatccataccaccagcactgactgtatacttctgcaacttctgtggtcagcaaggaaat
tttcggtgcaagcgctgcaagaagactccttactgctctgtggtgtgtcagacagaagac
tggaaggcacacagacacatgtgcaaatccattgatctagaacctgaaaaagagacaact
aaggaaactacagtttcgctggtgacaggagacagagctggcctggttgagtctaagcac
ggcgatgcatccagcctccagagggtctatttgaaggacttgcatataactaaaatcatt
aagggaacagacatccaggcaactgttgtagagttctacagccctggcaggttttttctc
cttgcccaaagtcctgagttgctggaagctctgcaatacatcagcacagagcttcagaaa
actaacagctgcccatcaatgaggacatatgtaccacatgttggtgaggtctgcgcggtt
cagttctcatgtgatctgaactggtacagaggcctggtccaaactttagctgctgaccag
aagacggctaatatcctttacattgactttggcaatgaagagcatgtacctgtggatagg
atcaagcctctggctgctaatatccagccatattgtccatgcgcaatggagtgccatatc
gctggggtggtcccagtgactggcaactggtcaggcgagtgccgtgtatcagtgaaacag
ctgttggtcggcaagattgtgactgttagactggtagaatcactagaaaatggccgcatc
cacgctgtggatatcctgctttcaatgggaaagaagttgagcacattcctccttgagcaa
ggttatgcagcagaggaaacagtcaatgaaacaccaactctgcaagaaataaatgccatg
gtaagtgcatccttggataacttcatgcgtctctctgatgggaaggatgacaacacctgg
gctcagccaccagagcccctgaaactggcagtaggggactccttctctgttgtggttact
catcttcagtcacccaatgaaattattgtacagaaggtggagaacgctggagtgattcag
gagttgcagctgaagctgagggaacactgctgccaggcaccagcccctcagaactttagg
ccagcccccggcacagtttgctgtgcccagttctcagaggacaagcagtggtacagggct
aaagttctggcttatgcatcagaggaacgcgtctgtgtcggctaccttgattttggcaac
tctgaggaggtggatttaggcaatctgcagcctatcaacactttactactggccctgccc
atgcaggctatggcttgtggtttagcaggggtacagcctgttggggagagctggtcagag
gactgcctgctggccctgcagcgaagggtatcgaaccgaatactgcgccttaagatccag
ggagcacatgagggcaaggctttggtagccatgattgatgaggccagtgatcctcaggcc
aatgtagccgagctgttgatctctgcaggcttcgctgcacctgctcctgttcccaccagt
agtgaccagcaggctgacaagacagcaactgctgctgcggaaccacctggtgtgccggcc
ccagcttgtgagcctctggtgtggtcttttagtgagcttccttgtgacggccagacagtg
gcactgctagccagtgttgtggagaaccctcaagagttttactgccgcatcgacaatcct
acagaccatcagcggctgatagaactcggggctgagttgaaacagcattgtgcggcagaa
gcctcaccttttgtgcccaaagtgggggagccgtgttgtgccatgtttccaggtaataaa
gagtggtatcgggctatagtaaacgagctgtctagagacgtgtctgtaaacttcgtggac
tatggttatagcatgaaagtgggaaaggaccaaattcgatccattacaccccgactcctg
atgctacccttccaggcaattcgctgctggctcacaggtgtggagcccctgggatcagag
tggagcagtgaagccctgctgtggttccagagtctggtggatggcaagcagctctctgct
cgtgtcctttgtgccactgaacaaggctatggtattgagctggagagcaaagggcagaat
gtggcagctgccctcatttctgagcaactagccaaagttcctggagcggttcccaaagag
acacatgcaaccacaggctctgaacaaaaacaccaagagaacatacagggaaatgaaaac
agccaaatgcctgtgcaagcctccgaccagacaggaaccagttccaaaaagattccatca
gaagccccatcttttccagtggactggaagactgtggagctgcctctcaacgacaccttt
cagccttgcattgcagccttcactagtccttccctcttctacctgctcgttcccagccag
gtggaccagcaaaagcttcaggaggtgatgatggagctggttgcctattgcagcaacatt
cgtgcttctttatcctccactgtcctgagcagaccagttcctggagctgcctgctgtgcc
cagttttctgctgacaataactggtaccgtgcagtggtcctggaggtcggtgagaatgag
atgagtgtcatctatgcagattacggcaacagtgagaaggtgccattctcccgtgtcctg
cccatcaccaagcacctgctgcagctcccctttcagatcactcgctgcaccctcactggt
aaggaacacttccctgcagagttgccagaggaagtgctgcagatgtttcaaagccagttg
ttgaatggcgtcctcgccactgtccagtccttcgacgactctgttaacgtgctatcactc
actcttcccactgagaggggaggagggaacctcagcaccatgatcttggatacactacag
aaccaggccagtagtaaaccttgctcccccaccacccggaaggctgaccaaactgacagc
agcacatctactgccagccctacagttgttcctgactgccccccgcccatggtcataccg
gaaacccaaaaggggctgaaacatacaactgctaccaccggcataaccataatcccagag
caggaaccccagactacccagcagaagacaaacacctctgctgaagatcccgtacagaag
attattgcgcaaatggagcctccatgcaaaattgatcctcaggcccctggctgctgttgt
caaaacctgatgactaagattgaccacctggagcatttggtgcagctgcagctttctctc
ataaagcagttagtgggacagacaaaataa
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