Etheostoma spectabile (orangethroat darter): 116671118
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Entry
116671118 CDS
T08457
Symbol
itgb4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04382
Cornified envelope formation
esp04510
Focal adhesion
esp04512
ECM-receptor interaction
esp04810
Regulation of actin cytoskeleton
esp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116671118 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116671118 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116671118 (itgb4)
04810 Regulation of actin cytoskeleton
116671118 (itgb4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116671118 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esp04147
]
116671118 (itgb4)
04515 Cell adhesion molecules [BR:
esp04515
]
116671118 (itgb4)
04090 CD molecules [BR:
esp04090
]
116671118 (itgb4)
Exosome [BR:
esp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
116671118 (itgb4)
Exosomal proteins of bladder cancer cells
116671118 (itgb4)
Cell adhesion molecules [BR:
esp04515
]
Integrins
Integrin beta subunits
116671118 (itgb4)
CD molecules [BR:
esp04090
]
Proteins
116671118 (itgb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
PSI_integrin
Ig_DSCAM-DSCAML_C
I-EGF_1
EGF_integrin
EGF_Teneurin
EGF_2
EGF_TEN
vWA_SIBA-E
SEA
Motif
Other DBs
NCBI-GeneID:
116671118
NCBI-ProteinID:
XP_032357993
LinkDB
All DBs
Position
21:complement(3311794..3344791)
Genome browser
AA seq
1940 aa
AA seq
DB search
MGRWTLHLSVGLGILAVLLTCCYTEENYCFASRAKTCSECLQSGKGCAYCSDETFNGPRC
DLYQNIIHYGCSAAAVITAQSSMMIEKEQAINIRLQQSQVSPQQVSMSFLPGEEKLVDVE
VFAPTKGPLDLYILMDFSNSMADDLNNLKSMGKELATLVKQLSDDYTIGFGKFVDKVIEP
QTDMRPSKLAQPWPNSDPPFSFKNVIKLTSDSDAFNRDLQKEKISGNLDAPEGGFDAILQ
AAVCGDKIGWRAHSTHLLVFSTESAFHYEADGANVLSGILQRNDELCHLNADGSYTHDII
QDYPSIPTLVRLLGKHNIIPIFAVTNHSYTHYEKLKEYFPIAEVGLLQEDSSNILQLMDD
AFKNIRSKISIRAEDRPKAFETQFLTTSGSVAQYGAFDFQPGAIGKFQMRLKAQRMINEQ
PVCQMDSDEKQGTMRVKPTTFSNAVNVKASVLCPTCDCEKIVIPRAPRCYGNGDLVCGKC
QCYAGWVSTFCNCSVSASAKDTSQCIEPGMTEPCSGRGDCLECGTCVCYNPEQFEGPYCQ
WDKTQCQRYGGFLCSDRGSCSMGRCVCPEGWEGSACECSKSNQTCLDSKGGVCNGQGKCV
CGRCECTESAIDLTSTCEPNFQPLLGVCEGTRSCVQCQAWKTGEKKEKEECDKCPFKITL
VDELKEREKVLDSCSFRDEDDDCTYYYTVENPKDPLVKVLEVQVLEKKECPPASLLWLLP
LFLFLLLLLALLLLCCWKYCACCKTLCQSCLALLPCCGRGRMVGFKEDEYLLRQSLLTSD
HLDTPMVRTGPPKGTDVVRWKVTDNVHRSPNHPQALIKPNPKESIQFPISLRLNRLFSEN
LSRPDSRDAEQLRKEVADNLNEVYKQIPGAQKVQKTAFRMQRNAGKRQDYAIMDTVLSAP
RSSYPDIVKLTEKTVQSGNAHDLKVVPGYYTVATDREAAGAIEFQEGVESVDVHVPLFVK
DEDDEKKQLLVEAIDVPMGIAEIGKRLVNITIIKEHATNIFSFLQPAYTYSRQDGVANIP
ISREIIEDGRTQVTYRTRDLTAKDKKDYVAVEGDLSYAPGETQKIVPVRLLELGEKDGLL
EDKQVKQFVMDLSNPREGAKLGRYPRTTITIADQPEPSIMMFKKGTQNFTTSDPTYVIPV
VRTRNQDSPATVKWRTKKAQRFDLAGTLKFSPGETEKNIVIDPRAHNSPIQPETIQLELL
DPSSNASIGDRKTTLVNISDGAPEVAQIQQKGYTNQNLNSPGGHLPSPSNLKAKATGPRS
IRLNWDPLSGNPMGYKVKYWIYGDPEKDAQVLDVKTPQAELTNLYPYCDYEMRVCGYNAV
GDGYDTDMVACQTLEDVPGEPGRLAFNVISPTVTQVSWAEPAETNGNITAYEVIYTPIDD
GRKPVGPAKKVKIDNPKKRMLLIENLQNAQTYQYKVRAMNSIGWGPFKDATINLASQPVR
PLSIPIIPDIPIVDAEAGEEYDSYLMYSNEVLKSPTGSKTPSVSGDDYMINGKWEQNFLF
PGGSATRNLSASSSPMSTLSSNYRGAGGSFTTETSTTYMSGAAGSRRHDMIGGGVHTSEV
IMRKRSENRGYTDENIRDSIVIGDVSSKFPDLGGFGYAGIQSSSQSQFSYNLSQGSRART
ESSDVNDALYNLDRVLLDARLSPGVPDTPSRLVFSALGPTALKVSWQEPHCEKDILGYCV
LYQLLSGGEMKRINVTNPAENSVIIQDLLPNHSYLFKVKGQSQEGWGPEREGVITIESAV
DPKSPLSPMPGSPFTLSTPSAPGPLVFTALSPDSLQLSWEKPRKPNGDILGYVVTCEQLH
GGGDLRTFQVNGDSAETSLTVPNLTENIPYKFKVQARTTQGFGPEREGIITIESQDGSAL
SQYNSQSTRREVFHMPTEVSTRTNVSHTMLNDPYFSADGMMMTTQHSETSGMVTRHVTKE
VVQRSVMGGTTVTKKMFYES
NT seq
5823 nt
NT seq
+upstream
nt +downstream
nt
atggggagatggacgttacatctctcagtggggcttgggattctagccgtcctgttaacc
tgctgttatactgaagagaactactgctttgcttccagggccaagacctgttcagaatgc
ctgcagtcggggaaaggctgtgcatactgctctgatgagacctttaatggccctcgttgt
gacctgtaccagaatataattcactatggctgcagtgctgcagctgtaatcacagctcaa
agcagtatgatgatagaaaaggagcaagcaatcaacattagacttcagcagtctcaagtg
tctccacagcaggtgagcatgagctttctgccaggagaggagaagctggtggatgtggaa
gtgtttgctccaaccaaaggacctcttgacctctatattcttatggacttctccaactcc
atggctgatgatttgaacaacttgaagagcatgggcaaagagctggctacattggttaag
cagctgtcagatgactacaccattgggtttggaaagtttgtggacaaagtgattgagccc
cagacggacatgagaccctccaaacttgcgcagccgtggcccaacagcgaccctcctttc
tcttttaaaaacgtaatcaagctgaccagcgactcggatgccttcaacagggacctccag
aaggagaaaatatctggcaacctggatgctcctgaaggaggttttgatgccatattgcag
gctgcagtttgtggggataagatcggctggcgtgctcacagcacccaccttctggttttc
tccaccgagtcagccttccactatgaggctgatggtgctaacgtgctgtcaggtatcctg
cagcgcaacgacgagctctgccacctgaacgcagacggcagttacacacacgatataatc
caggattacccttcaatacccacactggttcgtctgctgggcaaacacaatatcatccca
atctttgctgtcaccaaccactcctacacgcactatgagaaactaaaagagtacttcccc
attgctgaagtcggtctgttgcaagaagactcttccaatattctgcaactcatggacgat
gccttcaagaatatccgttctaagataagcatccgtgcagaggaccgacccaaggcattc
gagacacagttcttgaccaccagtggaagcgtcgcacagtatggagcctttgattttcaa
cccggagcaataggcaagtttcagatgcggcttaaagcccagcgaatgatcaatgagcag
cctgtctgtcagatggattcagatgaaaaacaggggacaatgagagtcaaacctacaacc
tttagcaacgctgtcaatgttaaagcctcggttttgtgtccaacctgtgactgtgaaaag
attgtcatccctagagcacccaggtgctatggcaacggagacctggtgtgtgggaagtgt
cagtgctatgctggctgggtaagtacattctgtaactgctcagtaagtgcttcagctaag
gataccagccagtgtatagaaccaggcatgacggagccctgttcaggccgtggggactgc
ctggagtgtggaacctgtgtgtgctacaacccggaacagtttgaaggaccatactgtcag
tgggacaagacgcagtgtcaaagatatggaggcttcctctgcagtgaccgtggctcttgc
agtatgggtcgctgtgtgtgtcctgagggctgggagggcagtgcctgtgagtgttccaag
agcaaccagacctgtctggacagcaaaggcggtgtctgcaatgggcaaggtaaatgtgta
tgcggccgctgtgagtgtacagaatctgctattgatctgacttcaacctgtgagccaaat
ttccagcccctgttgggtgtgtgtgagggtacgaggagttgcgtccagtgtcaggcctgg
aagacaggagagaagaaagagaaagaggagtgtgacaagtgtccctttaaaattaccttg
gtggatgaacttaaagaacgggagaaggtgcttgattcgtgcagtttccgggatgaggat
gatgactgtacgtactactacactgttgaaaaccctaaagatcccttagttaaggtcttg
gaggtccaggtgctcgaaaagaaagaatgtccccctgctagcctcctgtggttgctccca
ctcttcttgttcctcttgttactgctggccctgttgctgctctgctgttggaaatactgt
gcctgctgcaaaaccctctgccagagctgtcttgccctgctgccttgctgtggaagaggt
cgtatggttggcttcaaggaagatgagtatttgctccgccagtctctgcttacctccgac
catctggacacaccaatggtgaggaccggcccacccaaaggaaccgatgtggtccgctgg
aaggtcactgataatgtacaccgatcacccaatcacccccaggctctgataaagcccaac
cctaaagagtccatccagttcccaatctccctccggctaaacaggctgttctctgagaac
ctgtctcgccccgattccagagacgccgaacagcttcgcaaggaagtggccgataaccta
aatgaggtgtacaagcagattcccggcgcccagaaagtacaaaaaactgcattcagaatg
cagagaaatgccggaaaaaggcaggactacgccattatggacaccgttttatctgctcct
cgcagcagctaccctgatattgtcaaactcacagagaaaactgtccagtctggaaacgca
catgatctcaaagtggtgcccggctattacactgtggccaccgacagagaggctgcagga
gccatcgagttccaagaaggtgtggaatcagtagacgttcacgtaccactctttgtcaag
gatgaagatgatgaaaagaagcagctgctggtggaggccatagatgtgccaatggggatt
gctgagattggaaaacgtttggtcaacatcaccatcatcaaagagcatgccaccaatatc
ttctcgttcctccagccggcctacacctacagcaggcaggacggagtggccaacattccc
attagcagagagatcatagaagatggacgcacacaggtcacctaccgcacacgggacctc
acagccaaggataagaaggactatgttgctgtggaaggagacttgagctacgctccaggt
gagacccagaaaatagtgcctgttcgtctgctggagctgggcgagaaagatggcctcctg
gaagacaaacaggtcaagcagtttgtcatggatctcagtaacccacgggaaggtgccaag
ctgggacgctacccaagaactactatcaccattgcggaccaaccagagcccagtattatg
atgttcaaaaagggcacccagaacttcaccacatctgacccaacctacgttatccctgtg
gtccgcactcgcaaccaggacagtcccgctacagtgaaatggcgcaccaagaaggcccag
cgctttgacttagccggcactttaaagtttagtcccggggagacggagaagaacatagtg
atcgacccgagggctcacaatagcccaatccagccagagaccatacaattggagctgttg
gacccaagtagcaacgcttctattggagacagaaagaccacccttgtcaatatatctgac
ggagctccagaagttgcccagatacagcagaagggctacacaaaccagaatctcaactcc
cctggtggtcatcttccctctccaagcaaccttaaggccaaagcaactggacccagaagc
attcgcctcaactgggacccactgtctggtaacccaatggggtacaaggtaaagtattgg
atctatggcgacccagagaaagatgcccaggtcttagatgtgaagactcctcaagctgag
ttgaccaacttgtacccctattgtgattacgagatgcgagtgtgcggctacaatgcagtg
ggagatggatacgatacagacatggttgcctgtcaaacactggaggatgtgcctggtgaa
cctggacgtctggcctttaatgtcatcagcccaactgtcactcaggtcagctgggcagag
cctgcagagaccaatggcaacattacggcttatgaggtcatctacacacccatcgatgat
ggaaggaagccagtgggccccgctaagaaagtaaagattgacaaccccaagaagcgaatg
ctgttgatcgagaaccttcagaatgcccagacctaccagtacaaggtccgtgccatgaac
agcataggctggggccccttcaaagatgccaccataaacctggcatcacagcctgtcaga
cctctatccattcccatcattccagatatccccattgtggatgcagaggcaggagaagag
tatgacagctacctgatgtacagcaatgaggtgctgaagtcccctacaggctccaagacg
cccagcgtctctggtgatgattacatgatcaatgggaagtgggaacagaacttccttttc
ccagggggatcagcaacacgcaacttgtcagcatcatcctctcctatgtccactctgagc
tcaaactacagaggggcaggcggctccttcaccacagaaacatccaccacatacatgtcc
ggagcagcaggctctcgtagacatgacatgataggaggaggagtacacacatcagaagtt
atcatgaggaagcgttcagagaacaggggttacacagatgaaaacatccgggactcaatc
gtcattggagatgtgtcaagcaagttcccagatttaggtgggttcggctacgctgggata
cagagcagctctcagagccagttcagctacaacctgtctcagggttccagggccaggact
gagtcttcagacgtcaatgacgccctatataatctggacagggtgctcctggatgctcga
ctgtctccgggcgtaccagacacccccagcagactggtgttttctgctcttggtcccact
gccctcaaagtgagctggcaggagccccactgtgagaaagacatcctgggctactgtgtt
ctctaccagctgctcagtggaggggagatgaagcgtatcaatgtgaccaacccagcagag
aactctgtaatcatccaggacctgctgcccaaccactcctatctatttaaggtgaagggt
cagagccaggagggctggggtccagagagagagggagtcatcaccatcgagtcggcagtg
gaccccaagagtcccctcagccccatgccaggctcaccatttactctgagcactcccagt
gccccgggccccctggtcttcactgctctgagccccgactccctacagctcagctgggag
aaaccccgtaaacccaacggagacatcctgggctatgtagtcacctgcgaacaactgcat
ggtggaggagacctgcggaccttccaggtgaacggggacagtgctgagaccagtttgacc
gttccaaacctgactgagaatattccctacaagtttaaagttcaggctcgaactacacag
ggcttcggccctgagagggagggcatcatcaccattgagtctcaggatggaagcgctttg
tctcagtacaacagccaatcaacgaggagggaagttttccacatgccaacagaggtcagc
acgcggaccaacgtctcccacaccatgctcaacgacccctacttctcagcagatgggatg
atgatgactacacagcactcagagaccagcggcatggtgacccgtcacgtcaccaaggaa
gtggttcagaggagcgtcatgggaggaaccaccgtcacaaagaagatgttttacgaatct
taa
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