Etheostoma spectabile (orangethroat darter): 116671148
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Entry
116671148 CDS
T08457
Symbol
robo1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
esp04515
]
116671148 (robo1)
Cell adhesion molecules [BR:
esp04515
]
Immunoglobulin superfamily
ROBO family
116671148 (robo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Ig_5
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
116671148
NCBI-ProteinID:
XP_032358032
LinkDB
All DBs
Position
3:complement(21364494..21749604)
Genome browser
AA seq
1708 aa
AA seq
DB search
MKAVLDTGETDVSDARTVSIIMRGMWSPLLIMALLRLAQGQEVPVVPETGVAQDGASEGA
TPAPTTEHEDDNSLGYTGSRLRQEDTPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTVE
WYKDGERVETDRDNPRSQRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSHN
ASLEVAILRDDFRQNPADVIVAAGEPAVLECQPPRGHPEPTISWKKDGINIDDRDERITI
RGGKLMITNARKSDAGKYVCVGTNMVGERESEIAELTVLERPSFVRRPGSQVVLVDQSVE
FRCEARGDPVPTVRWRKDDGDLPKGRYEIREDHTLKIRRLTSADVGSYTCVVENMVGKAE
ASATLTVHVMSVPPAFVVRPRNQVVGVGRTVTFQCEATGNPQPAIFWQREGSQNLLFSYQ
PPQPSSRFSVSQSGDLTITDAERSDMGYYSCQAINTAGSVLTKALLEITDVVSDRPPPVI
QQGPTNQSVAVDGTVVLNCVATGNPTPTILWRKDGVLVSTHDSRVKQLDTGALQIRYAKL
GDTGTYTCIASTPSGEASWKAYLEVHEFGVPVQPNRPTDPNLIPSAPSKPEVTDVTRTSV
ALSWKPNLNAGATPTSYVIEAFSHASGSSWQTLAEHVKTESFVLKGLKPSAVYLFLVRAA
NAYGLSDPSPITEAVKTQDIPPTSQGVDHRQIQRELGDVVIHLHNPTILSSSSVRVQWTV
EQQSQYIQGYKVMYRPSPEGLQRSEWAVFEVRTPGEDSAVVPQLRKGVTYEFKVRPFFNE
FQGTDSDVKIGKTLEEAPSAPPREVTVAESGDNGTAIMVSWQPPPEEEQNGVVQEYKIWC
LGNESRYHINRTVDGSTLSVLIPSLAPGIRYSVEVAASTGAGPGVKSDITFFQLDASGRM
TGDEIQENPLSQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLSSSYAGIR
KVPSFTFTPTVAYQRGGEGVSSAGRPGLLNIGESATQPWLADTWPNSCANHNDCSINCCT
AGNGNSDSNLATYSRPADCIANYNNQMENKQTNLMVPESGLYGDVDLSNKINEMKTFNSP
NLKDGRFVGPGGQPTPYATTQLIQSSIMGHSVNPDRGTGGSGGGLGGGEMNEKHCWKPTS
VQQQKQEMGSQLQYNIMEQNKLNKDRYRGGDSPMPATIPYNQTHDSHTGGSYNSSDRGSS
STSGSQGQKKGVRTPKLPKQSTMNWADLLPPPPANPPPSRSTEEYSLSLEESCEPDMQCP
MPPSHMYLQPDELEEEEEMERGPTPPIRGAASSPAAVSYSHQSTATLTPSPQEEMQPMLQ
DSHERRRHAVSPPPPPRPLSPSHTYGYITSPLALDTDGMEEEEEDILEEEEEEGDDTDAE
VAKMHYHHTHPHTHPHHPQMHPRRLLLRGLEQTPASSMGDLESSVTGSMINGWGSASEED
NVSSGRSSAVSSSDGSFFTDADFAQAVAAAAEYSGLRVAKYPNTLGHEVGGASARKYQIN
PSGHRPGSPVSTDSNMSMAAVHRRPPKKQKQHPAGHPGNQRREAYNEDLPPPPVPPPAVL
KSPTHPSKVVPEGRGAISPKAGEGRDKRGGTGGHRPREGSDPRTASTERKDAQERQKTAH
GVKANKHEGSAASKARQHAGSEDIPPYSRPQFPAVNGPRDLSSSSSVSSRGSGGRRRGDG
GRRNQADTGLNATGVFRPGDEELEMAES
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcggtgttagacacaggggagactgatgtcagtgatgccaggacagtgagcatc
ataatgcgtggcatgtggtcgcccctcctcataatggctctgctcaggctggcccagggc
caagaggttcctgtagtcccagagacgggagtcgctcaggatggggccagcgaaggggca
acaccagctcccaccaccgaacacgaggatgacaactctttgggctacacaggatcccgt
ctgcgccaagaggacaccccaccccggattgtggagcacccctctgacctgattgtctcc
aaaggggagcccgctactctcaactgtaaagcggaggggcggccaaccccgacagtggag
tggtacaaggatggagagcgggtggaaacggacagggacaatccccgttctcagcgcatg
ctgctgcccagtggctccctcttctttctacgcattgtccatggacgacggagcaagccg
gatgaaggttcctatgtctgcgtggcccgcaactacctgggagaggcagtaagccacaac
gcctcgctggaagtagccattctacgtgatgacttcagacaaaaccctgccgatgtgatc
gtggcagccggagagccggcggtcctagagtgtcaacctccacgcggacatcctgaaccc
accatatcgtggaaaaaagatggaataaacattgacgaccgagatgagagaatcactata
cgcggggggaagctgatgatcacaaatgcccggaagagcgatgctgggaagtacgtgtgc
gtcggcaccaacatggtcggagaacgtgaaagtgaaatagctgaacttacagtgcttgag
cgtcccagctttgtgcgtcgcccaggcagccaagtggtgttagtggaccaaagtgtagag
ttcaggtgtgaggcccgtggtgacccagttcccaccgtccgctggaggaaagacgatggc
gacctgcccaaaggaagatatgagattcgtgaggaccacaccctgaagatccgtcgcctg
acctcggctgatgttggctcctacacctgtgtggtagagaacatggtgggcaaggcggag
gcatcggccacgctcaccgtccacgtcatgtctgtgcccccggcatttgtggttagacca
aggaaccaggtggtgggggttggcagaactgtcaccttccagtgtgaggccactggaaac
ccacagccagccattttctggcagcgggaagggagtcagaacctgctcttctcctaccaa
cctcctcaaccctccagccgattttctgtatctcagtctggggacctgaccatcactgac
gctgaacgctcagacatgggctactacagctgccaggccatcaacactgctggaagtgtc
ctcaccaaggctctgctagagatcacagatgtcgtgtcagaccgcccgccaccagttatt
caacagggcccaaccaatcagtcggtagctgtagatggcacagtggtccttaactgtgtg
gcaacagggaaccccacccccaccatcctgtggaggaaggatggtgtcttggtgtccact
catgactccagggtcaaacagctggacacgggcgcgttgcagatacgctatgcaaagctt
ggtgacactggaacctacacctgcatcgcctccacacccagtggagaggcctcatggaaa
gcctacttagaggtccacgaatttggagtcccagtccagccaaacagacctactgaccca
aacctgatccccagtgccccttccaaacctgaggtaactgacgtcacccgcacctctgtc
gccctttcctggaaacctaaccttaacgccggagccacacccacctcctatgtaatagag
gccttcagtcatgcatcagggagcagctggcagaccttggcagagcatgtgaaaactgag
tcatttgtactgaagggcttgaagcccagtgcagtctacctcttcttagtacgggcagct
aatgcctatgggctgagtgatcccagtcctatcactgaagctgtgaaaacacaagatatc
cctcccaccagtcagggtgtggaccatcgtcagatccaaagggagttgggagatgtggtc
atccacctgcacaaccccactattctctcctcctcctctgtcagggtgcagtggacagtg
gagcagcagtcccagtacatccagggctacaaggtgatgtataggccttcaccggagggg
ctgcagaggagtgaatgggcagtgttcgaggtgcgcacccccggggaagacagcgctgtt
gtaccacagctccgtaagggagtcacatatgaattcaaagtccgccccttcttcaatgaa
ttccagggaacagacagcgatgtcaaaattggcaagacgctggaggaagctcccagtgcc
cctcctcgtgaggttacagtggcggagagcggggacaatgggaccgccatcatggtctcc
tggcaaccccctccagaagaggagcagaatggggtggtccaggagtacaagatttggtgc
ttggggaatgagagcaggtatcacatcaaccgtacagttgacggctcaaccttatccgtg
ctgattcccagtctggccccagggatccgctacagcgtggaggtagcagccagcaccggg
gcgggtcccggggtcaagagcgatatcaccttcttccagcttgatgcgtctgggcgaatg
acaggggacgagatccaggagaaccccctgtcccagcagatctccgatgtggtcaagcag
ccggcctttatagcaggcataggagccgcgtgctggatcatcctcatggtcttcagcatc
tggctgtaccgacaccgaaagaagaggaatggcctctccagcagctatgcaggcatacgc
aaggtgccatcttttactttcacaccaacagtggcatatcagagaggaggagaaggtgta
agcagcgctggaaggcctggtttgctaaacattggggaatctgccactcagccttggctg
gcagacacgtggccaaactcctgcgccaaccacaatgactgcagcatcaactgctgcact
gcaggcaatggcaacagcgacagcaacttggcaacatacagccgcccagccgactgcatc
gccaattataacaaccagatggaaaacaagcagaccaacctcatggtgccagagtcaggg
ctctatggagatgtagacttgtccaacaagatcaatgagatgaagaccttcaacagtcca
aacctgaaagatggccgctttgtgggtccagggggccagccgacaccgtacgccaccacc
cagctcatccagtcctccatcatgggacacagcgttaaccctgacagaggaaccggaggg
agtggaggaggactgggtggaggggagatgaatgaaaaacactgctggaagccaacctca
gtccagcagcagaaacaggagatgggctcccagctgcagtacaacatcatggagcaaaat
aagctgaacaaggaccgctacagaggaggtgacagccctatgccagccaccatcccctac
aaccagacccacgatagccacactggaggctcctacaacagctccgaccgaggcagcagc
agtacctccgggagtcagggtcagaagaagggagtgcgcacccccaaactacccaaacag
agcacaatgaattgggctgaccttctgccccctccccctgcaaacccacccccaagtcgg
agcacagaggagtactctctatcattggaagaaagctgtgaaccagacatgcagtgcccc
atgcccccctctcacatgtacttgcagcctgatgagctggaggaggaagaggagatggag
agggggcccactcctcccatccgaggagcagcctcttcccctgcagctgtatcttatagt
caccagtccacagccaccctcaccccctcaccgcaggaggagatgcagccgatgctccag
gacagccatgaacgcaggcgccacgctgtgagccccccaccccctccaaggcccctctct
ccttcacacacatatggttacatcaccagcccgttggccttggacactgatggtatggag
gaggaggaggaggatatattggaggaagaggaggaggagggtgacgacacagatgcagag
gtggccaagatgcactaccaccacacccacccccacacacacccccaccatccccagatg
catccgcgaaggttgctgctacgagggcttgaacagacgcctgcgtccagcatgggcgac
ctggagagctcggttaccggctccatgatcaacggatggggctcggcttctgaagaggat
aatgtctcttcagggaggtccagtgccgtcagctcatcagatggatccttcttcactgat
gctgactttgctcaagcggttgccgcagccgcagagtactcaggcctgagggtggccaaa
tatcccaacacactgggccacgaagtgggaggagcttcagcacgaaaataccaaataaac
ccatcaggacaccgtcctggcagcccggtgtctacagacagtaacatgagtatggcagct
gtacacaggaggcctcccaagaagcagaaacagcatcccgcaggtcacccagggaaccag
cgacgtgaagcctataatgaagatctcccacctcctcctgtcccacctccggctgtgctc
aagtcgcctacgcacccctccaaggtggtcccggagggccggggagcgatttcccctaaa
gcgggcgagggtcgagacaagagaggaggaacggggggccatcggcccagagaaggctcg
gaccccagaaccgcctcgacagaacgcaaagacgcccaagagagacagaagacagcccac
ggggtgaaagcgaacaaacatgagggtagcgccgccagcaaagcacgccaacatgcaggt
tcagaggacattccaccctacagccgaccacagttccctgcggtcaacggcccccgggac
ctaagctcctccagctccgtgtcttccaggggctcggggggccggcggagaggagacgga
ggccgcagaaaccaggcagacaccggcctcaatgccacgggggtcttccgaccgggagac
gaagaactagagatggcagaaagctga
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integrated database retrieval system
