Etheostoma spectabile (orangethroat darter): 116671191
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Entry
116671191 CDS
T08457
Symbol
nlrc3
Name
(RefSeq) NLR family CARD domain-containing protein 3 isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
esp04054
]
116671191 (nlrc3)
Pattern recognition receptors [BR:
esp04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116671191 (nlrc3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
CARD
Ferritin_2
AAA_16
ATPase_2
LRR_12
Motif
Other DBs
NCBI-GeneID:
116671191
NCBI-ProteinID:
XP_032358117
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Position
21:21509649..21523032
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AA seq
1134 aa
AA seq
DB search
MERKAHYDSILDRSKRIMWQDDCYVDLQSTSSSVSSQAGTEDLGWIQKHQDQLQRFITSS
FLEGMLTHLRKVDVLSSADEIKIKEAGRLQDQVNMLTTIVTDKDTQGSDALRGFIESSDS
QVAKLIINHDSMAKEHKEMLLRQYEQYRDRDSVSCPKLNIFSRTLLLVDGLSDIQQKEHD
LMQVGATRGRKRNHLRQLGLTKLLEPLTRVSLPPRVSLTLGVAGIGKTTWVRHFIRQWSQ
GAICTDVSFVLPFTFCELNSLEKVSAERLVKMAFPHLTDPSLVLSSSCRTLLILDGLDEF
RCTLNFSDAAPCSDPKKEVAIDDLVTNIIRGNLLPYVAVWVTSRPGVASLIPGGLVDRVT
EIPGFSPKDIQLFLNHHFSERDFASKIWAHLESHKILMVMCYIPCICWIVADTLMYIMQS
ETQESLPKTCTELYAHFCSMKAEVGEPRGREPVKMEQLHGSNRKLLGNLGRLAFYGLLKR
KYTFSEQDLRAYGIDLLLTQCSLGAGVLVREESAIYTTYRFTHLSLLEFLAATFYHISSK
RAIFDLFSESTMSWPKIGFQNHFRSAFQHSQQAEDGHLDVFVRFLTGLLCPMAQKPLAGL
LALGKDDGNQKAWAAGFLQGLLVSGGAVVSLRAVNLAYCLHELQHTELLRSVEEDLQLGS
LAGKLTRAHCVVLGYLLHVSPECSEQTNLTGSLNYTTVKCLLPQLLYCSCLRLENNHFKD
DVMELLGSLLSAKDCHIQKISLAENAISNKGSKALSRALLVNRTLTSLNLRNNNIGSKGA
KFLAEALKMNQVLVSINFQNNSIEEEGAQALAEVLHCNRKLVSLNIRKNKIGAGGAKRIA
EALKTNQTLTKLILCSNQLGDKGAIALAEALTVNHTLLSLQLQSNSISNRGMTALTKALR
LNRGLVSLNLRENSIGVEGAKNMAHALHENNSLQDLDLTANLLHDEGVQAIAGAIKFNRG
LTSLHLQWNFIKSSATKALAHALLSNATMQLLDLQENAIGNEGVIFLAEALKTNASLRTL
CLQGVSSSTSGAMAMAEALMTNRTLQTLDLRGNTVGMEGAKALANALKSNRSLKSLNLQE
NSLGMDGAIFIATALKGNHQLTYINLQGNGIGESGAKVISDAIRADAPGCVVDI
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaaggcacattacgattctatcctggaccgaagcaaacgcatcatgtggcag
gacgactgctatgtggatctacagtctacgtccagttctgtctcttcacaagctggaaca
gaagaccttggctggatccaaaagcatcaagaccagctgcaacgcttcattacttcctcc
ttcctggagggtatgttaacccacctgagaaaggtggatgtgctgagttcagctgatgag
atcaagatcaaagaagcgggccggctgcaggaccaggttaacatgctcacaactattgtc
actgacaaggacactcaaggttctgatgctctccggggcttcatagagagctcagattct
caggtggccaagctcatcatcaatcacgattccatggcgaaggagcacaaagagatgctg
ttacggcaatatgagcagtacagagacagagattcagtcagctgccccaaacttaacatc
ttctcaagaaccttactactggttgatggactttccgacatccagcaaaaggaacatgac
ttgatgcaggtgggggcaactcgaggaaggaaaagaaatcatctcagacagctggggctg
accaaactcttggagcccctgacccgggtcagtttacctccccgtgtctccctcacactc
ggggtggctggaatcggcaagacaacctgggtccgacacttcatcagacagtggagccaa
ggggccatctgcacagacgtgagcttcgtcctgcctttcactttttgcgagctgaactca
ctggagaaagtctctgctgagaggctggtgaaaatggcttttcctcatttaacagacccc
agtctggtcctgagcagctcctgtcgcacactgctcatacttgatggtttggacgaattc
cgctgcactttaaatttctctgatgcagctccttgcagcgacccaaagaaagaagtggcc
attgatgacctagttactaacatcatccgggggaatctgctaccttacgtagccgtgtgg
gtgacctccaggccaggagtggcctcactcatccctggaggattggttgacagggtgact
gagatcccaggattcagcccgaaggacatccagctcttccttaaccaccacttctctgag
agggattttgccagtaaaatatgggcgcacttggagtcccataagatcttaatggtgatg
tgctacataccatgcatttgctggatagtagctgatactctgatgtatatcatgcagagt
gaaactcaagagagccttccaaagacttgtactgagctatacgctcacttttgttccatg
aaggcagaagtaggtgaaccaagaggcagggagcctgtgaaaatggaacagcttcatggg
agcaatcgtaaactgctggggaaccttggacgactggcgttttatgggctcctgaaacgc
aagtacaccttcagcgagcaagacctcagggcctacgggatagatctactgttaactcag
tgcagtcttggtgctggagttcttgttcgggaggagtctgccatatacacaacataccgg
ttcactcatttgtctttgctagagtttcttgcagctactttttaccatatctcctccaag
agggccatctttgacttattctcagagagcaccatgtcttggccaaagatcggtttccag
aaccactttagaagcgcctttcagcactcacagcaagctgaagacggtcacttggatgtg
tttgtacgcttcctgacaggcctgctgtgcccaatggcccagaaacctctggctgggctt
ctggcccttggaaaagatgatggcaatcagaaggcttgggcagcagggtttttacaaggc
ctcttggtcagcggaggtgcagtggtgtccctgcgtgccgttaacctggcttattgttta
catgagctgcaacacacagagctattgcggagtgttgaggaagatttacagcttggtagc
ctagcagggaaattaacacgggctcactgtgttgtgctgggctacctccttcatgtgtct
ccagagtgcagtgaacagaccaacctaacaggctctctgaactacacaacagtgaaatgt
ctgctcccacagctgctgtactgcagctgtctcaggttagagaataatcacttcaaagat
gatgtcatggagttgctgggaagccttctgagcgccaaagactgccatatccagaagata
agtttggcagagaatgccatcagcaacaaaggatccaaagccctgagtcgagccctcttg
gtgaaccggacgctaacgtctctcaatctccggaacaacaacattggctctaaaggtgca
aagttcctggcagaggcactgaaaatgaaccaagtcctggtatcaatcaacttccagaac
aactcaattgaggaggaaggtgctcaggccctggcagaagtactgcactgtaaccgcaaa
ctggtgtctctgaatataaggaagaataagattggagcgggaggagccaaaaggattgca
gaggcgctgaagacaaaccagactctcacaaagctgattctttgtagcaaccagcttggg
gacaaaggggcaatcgctctggcagaggctttgacagtcaaccacacgctcctctctctt
caacttcagagtaactcaatcagcaacagggggatgacagccttgaccaaagcactcagg
ctgaaccgtggcctcgtctccttgaatttaagggagaactccataggggtggagggagct
aagaacatggctcatgccctccatgagaacaactctctgcaggaccttgatctcacagcc
aacctgttgcacgatgaaggggttcaagctatagcgggcgcaatcaagtttaatcgcggc
ctcacctctctgcatctccagtggaatttcatcaagtcctctgccactaaagctctggcc
catgcactcctctccaatgccacaatgcagctcttggatctacaggagaatgctattggg
aatgaaggcgtcatttttcttgccgaagccctgaaaaccaacgcgtctctgcgtacatta
tgcctccagggagtgtcatcgagcaccagcggtgccatggcaatggcagaggctctaatg
accaaccgaaccctgcaaacattagatctacgtgggaacaccgtggggatggagggagca
aaggctctggctaacgcactgaaaagcaacagaagcctcaagtcgttgaatctgcaggag
aactctctgggtatggatggagccatatttattgcaacagccttgaaaggaaaccaccag
ttgacgtacatcaatttgcagggaaatggcattggagaatcaggagctaaggtcatatct
gatgcaataagagccgacgctccgggctgtgtggtggacatctga
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