Etheostoma spectabile (orangethroat darter): 116671377
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Entry
116671377 CDS
T08457
Name
(RefSeq) leucine-rich repeat-containing protein 4B-like
KO
K16360
netrin-G3 ligand
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04514
Cell adhesion molecule (CAM) interaction
esp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116671377
04517 IgSF CAM signaling
116671377
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
esp04515
]
116671377
Cell adhesion molecules [BR:
esp04515
]
Immunoglobulin superfamily
NGL family
116671377
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
ig
LRR_14
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
Ig_6
LRR_NXF1-5
DUF7617
Pam3_Gp34
Motif
Other DBs
NCBI-GeneID:
116671377
NCBI-ProteinID:
XP_032358498
LinkDB
All DBs
Position
21:complement(20767192..20776677)
Genome browser
AA seq
745 aa
AA seq
DB search
MRVVMVTNPCTPSPLLWLVQLLLWFHNHGPQLTEAAPPCPNPCTCSNQASRVICTRKSLD
QVPDSISENTRYLNLQENTIQVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTVVPSQAFEYLSKLRELWLRNNPIETLPAFAFHRVPSLRRLDLGELRKLDFI
SEAAFEGLVNLRFLNLGMCGLKDIPNLTPLVRLEELELSGNQLGLVRPGSFQGLVSLRKL
WLMHSRVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPAIKGKYIGELDQSHFTCFAPVIVEPPTDLNVTEG
MVAELKCRTGTSMTSVNWFTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSASDPSNSYSYFTTVTVETVETVRGDEENSARQYINETFIDFPNP
TVQRGVLEGRPGITISPSLSSLSSLSPRANRATENAVTVSIMDVTNIPGLDDVMKTTKII
IGCFVAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIVNVEDEIGAGAGSGISGGSTM
NSGSGEGTLRIHHPEIVNLPNIGRTDTLNHYYKSHHFNNNVMGLSIGSDGMGQGVILNSK
NQQVQDIPISCTSVPISTSTLLTSSGNGTNINPCSMSPPLPMSLPMPTMGLHGSIKGFMG
HNQNPQMEPLLFKGSSKENVQETQI
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgtcatggtgaccaacccctgtaccccttcccccctcctctggttggtccag
cttttgttgtggtttcacaaccatggaccacagctgacagaggcagcacccccctgcccc
aacccctgtacctgctccaatcaggcgagccgtgtcatctgtacaaggaagagtttagat
caagtcccggacagtatttcagagaacacaagatacctcaatctacaagagaacacaatt
caggtgatcaagtctgacacatttaagcacctgcggcatttggaaatcctccaactctcc
aagaaccacatccgacaaattgaggtgggagctttcaatggccttcccaatctcaacacg
ctggagctttttgacaaccgtctcacagtggtaccgtcacaagcctttgagtacctgagc
aagctaagggaactatggctacgaaacaaccccatagagacattgcccgcatttgccttt
caccgtgttccctctttacgccgtctcgatctaggggaactcagaaagctggatttcatc
tcagaggctgccttcgaaggtctggtcaacttgcgcttcttgaatcttggcatgtgcggc
ttgaaggacattcctaacctcaccccactagtacgactagaggagttggagctgtcaggg
aaccagttgggtttagtcaggcccggatccttccagggtcttgtgtctcttcgcaagctg
tggctaatgcactccagagtgtcagtcattgaacgcaatgcttttgatgacctcaaaaac
ttggaggagctcaacctctcacacaattccctacattccctaccccatgacctcttcacc
cctttgcaccagctggagagggtacatctcaaccacaacccctgggtgtgcaactgtgat
gttctgtggctcagctggtggctgaaagaaacagttcccagcaacactacatgctgcgct
cgatgccatgcgcctccagctataaaaggcaaatacattggggaactagaccagagccac
ttcacctgctttgccccagtgattgttgagccacccactgaccttaatgtcactgagggc
atggttgctgagctcaaatgtcgtactggaacctcgatgacctctgtgaattggttcact
ccaaatggcactctaatgacccacggatcataccgagttaggatctcagtgcttcatgac
ggaacactgaacttcacaaacgtcaccgtgcaagacactgggcagtacacttgcatggta
accaactccgctggaaacaccactgcaaccgctgtgctcaatgtgtccgcttcagacccc
agcaacagctacagctatttcaccactgtcactgtggaaaccgtcgagacagtgagagga
gatgaggagaactcagcaagacagtatattaacgagaccttcatagatttccctaatcct
actgttcaaagaggggtgttagaaggtcgacctggcatcactatttcaccttctctctcc
tctctttcctcactgtccccacgagccaacagagctactgaaaatgcagtgactgtgtcc
ataatggatgtaactaacattccaggcttggatgatgtaatgaaaacaactaagataatc
attggttgcttcgtggccattacctttatggcagctgtaatgttggtggtcttctataaa
cttcggaagcagcaccagctacacaagcatcacggcccggccagagccatcgaaattgtc
aatgtggaagatgagatcggagctggggccgggagtggcatctcaggtggttcaacgatg
aattctggcagtggagaaggaaccctaaggatacatcatccagaaatagtcaaccttccc
aacattggccgtacagatactctcaaccattactacaagagccatcatttcaacaacaac
gtgatgggtcttagtattggctccgacgggatgggacaaggagtgatcctcaatagcaag
aaccagcaagtccaggatatccccatctcctgtacctcagtcccaatctctacatctact
ttgctcacctcatcaggcaatggcaccaacatcaacccttgttctatgtccccaccgctg
ccgatgtctctccccatgcctaccatgggcttacatggatcgatcaagggtttcatgggc
cataaccagaatccccaaatggagcctcttctcttcaaggggagctcgaaggaaaacgtc
caagagactcagatctaa
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