Etheostoma spectabile (orangethroat darter): 116671433
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Entry
116671433 CDS
T08457
Name
(RefSeq) neurexin-1a-like isoform X1
KO
K07377
neurexin
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116671433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116671433
Membrane trafficking [BR:
esp04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
116671433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
116671433
NCBI-ProteinID:
XP_032358578
LinkDB
All DBs
Position
21:complement(14951571..15009041)
Genome browser
AA seq
1506 aa
AA seq
DB search
MSVMAVCVWAAAPLVFLGLCLCSVGGQAQGEVLEFGGVSSQWGRFPVWNACCESVLSFSL
RTHSQEGLLLYLDDEGFCDFLELLLLHGHLRLRFSIFCAEPAELQSGVAVSDGHWHAVRV
KRDWKNTSLEVDGRLEGWAEVKSKRRDMTVFSHTYMGGVTPELHSSPLRLTSPSVREHPA
FRGWITAVSVNGSLATLESSEGVTVTAGCGPDHQCQNGGVCSVVNDQAVCDCSNTGYQGN
DCSEEHIYTPGLAHLMIGDQGKLRAREEYVATFKGSEYFCYDLSPNPIQSSSDEITLSFK
TLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVT
RNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNN
FMGCLKEVVYKNNDVRLELSRLAKQGDPKMKVSGVVSFKCESVATLDPVTFDTPESFVAL
SKWSAKKAGSISFDFRTTEPNGLMLFSHGKPRQQQRKDPRTPPTLKVDFFAIEMLDGHLY
LLLDMGSGTTKTKAIDRKVNDGEWYHVDFQRDGRSGTISVNSVRTAYTAPGDSEILDLDE
TLYLGGLPEDRAGLIFPTEVWTALLNYGYVGCIRDLFVDGQSKDIRRLAEAQRAVGVKPS
CSREPPKQCLSNPCQHNGICREGWNRYVCDCSGTGYLGRSCERDATILSYDGSKFMKVQL
PMAMHTAAEDVSLRFRSQRAYGVLMATTSRNSADTLRLELDGGRVRLTVNLDCIRINCTA
SKGPETIFAGSGLNDNEWHTVRVVRRGKGLKLTVDDLQPVEALTSELTPPPGQMAGDHTQ
LEFHNVETGIVTEKRFMPAVPSNFIGHLQGLTLNGMPYIDLCKNGDIDYCELNAVIGYKS
IVADPVTFRSRSSFVTLPTLQAYYSMHLFMQFKTTSPDGLVLFNRGDGNDFIVVELVKGY
LHYISDLGNGAHLIKGNSNSPLNDNHWHNVHISRDTNNLHTVKIDTKVTTQTTMGAKNLD
LKGDLYIGGVSKEMYRDLPKLVHSREGFQGCLATVDLNGRLPDLLADALATMGQVERGCE
VTLMKADLQGPSTTCQEDSCSNQGVCLQQWEGFTCDCSMTSYAGPLCNDAGTTYIFGRDG
GLVVYTWPPNERPSTRADRLALGFSTQQKHAILLRVDSASGLGDYLQLQIDKGNIRVVFN
VGTDDINIEESSKFVNDGKYHIIRFTRSGGNATLQLDDLPVIERYPSGNIDNERLAIARQ
RIPYRLGRVVDDWLLDKGRQLTIFNSQTTVRVGGGEREGMFQGQLSGLYYNGLRILNMAA
EGHPHIRVEGSARLVGDMPSSSITPQSSAAAGGNRSDSAPSTSDITTTTATNRKQGATQQ
SADDLLVASAECPSDDEDIDPCDPSSARPPLPEVKVFPGPSEVVRESSSTTGMVVGIVAA
AALCILILLYAMYKYRNRDEGSYHVDESRNYISNSATQPNGSAKDKPLGIAKISKNKKNK
DKEYYV
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgatggctgtgtgtgtttgggcggcagcccccctggtcttcctggggctgtgc
ctgtgcagcgtggggggccaggcccaaggggaggtcctggagttcggaggtgtgtccagc
cagtgggggcggttcccagtgtggaacgcctgctgcgagagtgtgctgagcttcagcctg
cggactcacagccaggagggcctcctgctctacctggatgatgagggcttctgtgacttc
ctggagctgctgcttctccatggccacctccgcctgcgcttctccatcttctgtgctgag
ccggcagagctgcaatcaggtgtggcggtgagtgatgggcactggcatgcagtgcgtgtc
aagcgggactggaagaacacctcgttggaggtggatggacgattggagggatgggcggaa
gtgaagagcaagagaagagacatgacagtattcagccacacctacatgggcggggtgacg
ccagagctccactcctcgccacttcgcctcacatccccttcggtacgggagcaccctgcc
tttcgtggctggatcacggcggtgagtgtcaacggctcactggcgacgttggaaagctca
gaaggtgtcaccgtaacagctggctgtgggccggatcaccagtgccaaaacggaggggtg
tgcagcgtggtcaacgaccaggccgtctgtgattgctccaacaccggttaccaaggcaac
gactgcagcgaagagcacatctacactccaggtctggcacacctgatgattggcgaccaa
ggaaaactcagagctcgcgaggagtatgttgccaccttcaagggctctgagtacttctgc
tacgacttgtcgcccaaccccatccagtctagtagcgatgaaatcacgctctccttcaag
acgctgcagcgcaacggcctgatgctgcacactggcaagtcagccgactacgtcaacctg
gcactgaagaatggagctgtgtcacttgtcatcaaccttggctctggggccttcgaggcc
ttggtggagcctgtcaatggcaagttcaacgacaacgcctggcacgacgtgaaggtcacc
cgcaacctgagacagcactcaggcattggacacgctatggtgaccatctctgtggacggc
atcctgaccaccacaggctacacccaagaggactataccatgctgggctctgacgacttc
ttctacgtgggagggagccccagcactgctgacctgcccggttctccagtcagcaataac
ttcatgggctgtctcaaagaggtggtgtacaagaacaatgatgtacggttggagctgtct
agactggctaaacagggagacccaaagatgaaggtgagtggggtagtgtcttttaagtgc
gagagtgtggccaccctggaccccgtgacttttgacaccccagagtctttcgtggcacta
agcaaatggtcagcgaagaaggctggatcaatctcattcgacttcaggaccacagagcca
aacgggttgatgcttttcagtcatggcaaacccagacagcaacaacgcaaggacccacgc
acgcctcctacactcaaggtggatttctttgccattgagatgctggatgggcacctttac
ttgctgctggacatgggctcaggaaccaccaagaccaaggctatcgacagaaaggtcaac
gatggagaatggtatcatgtggacttccagagggacggccgctcaggaaccatctcggtg
aacagtgtgagaacagcgtacacagctccaggagacagtgagatcctggacctggatgag
actttgtacctcggaggactacccgaagaccgcgctggactcatcttccccacagaggtg
tggacggctctgttgaactatggttatgtgggctgcatcagagacctttttgtggacggg
cagagcaaagacatccggcggctggcggaggcccagagggcggtgggggtgaagccctcc
tgctcgagagaaccgcccaaacagtgcctgtccaacccctgccagcacaatggcatttgc
agggagggctggaatcgctacgtctgcgactgctctgggacgggatacctgggacgctcc
tgtgagagagatgcaactatcctgtcgtacgacggcagtaagtttatgaaggtgcagctg
cctatggcgatgcacactgcggcggaggacgtctcgctacgctttcgctcccagcgggcc
tatggcgttctcatggcaaccacgtcccgtaactctgcagacactcttcgtctggagctg
gatgggggccgtgtcagactcactgtcaacctagactgtatcaggataaattgtacagcc
agtaaaggcccagagaccatctttgcggggtcgggcctcaatgataatgagtggcacacg
gtgagggtagtccggcgtggcaagggcctcaaactcaccgtagatgacctgcagcctgtt
gaagccctcacctctgagcttaccccgccaccaggtcagatggcgggcgaccacacccag
ttggagttccacaatgtggagacgggtattgtgacggagaagcgcttcatgcctgccgtg
ccctctaatttcatcggccatcttcagggcctgacgctgaatggcatgccctacatcgac
ctgtgcaagaacggtgacatagactactgcgagctcaatgctgttattggctataagagc
attgtggctgaccccgtcaccttccgctcgcgctccagtttcgtcacactgcccacgctg
caggcctactactccatgcatctcttcatgcagttcaagacgacgtcacccgatggcctc
gttctcttcaacaggggggacggcaatgacttcatagtggtagagctggttaaaggctac
ctacactacatctctgacctgggcaatggagcacacctgattaagggcaactctaacagt
cccctgaacgacaaccattggcacaatgtgcacatatccagagacactaacaacctccac
acagtcaagattgacaccaaagtcactacgcagaccaccatgggcgccaagaacctcgac
ctaaagggtgacctgtacatcgggggcgtctccaaagagatgtaccgagacctgcctaag
ttggtccactcccgcgagggattccagggttgcctagcaacagttgatctaaatggccga
ctccctgaccttttggctgatgcacttgcaaccatgggacaagtagagagaggatgtgaa
gttacattgatgaaagctgacttgcaaggccccagcactacatgtcaagaagattcttgc
tcaaatcagggagtttgtttgcagcagtgggaaggcttcacctgtgactgcagcatgacg
tcatatgctgggccactatgcaatgatgctgggaccacttatatatttggccgggatgga
ggtttggtggtttacacgtggccccctaatgaacgtcccagcaccagggcagaccggctt
gccctcgggttcagcacccaacagaaacacgccattctgctccgggtggacagcgcgtcg
ggcctgggagattaccttcagctgcagatagacaaaggcaacattagagtagtgtttaat
gtgggcactgatgacatcaacatcgaggagagctccaagtttgtcaacgatggaaagtac
cacataattcggttcacccgcagcggaggcaatgcaaccctccaactggacgacctgcca
gtaatagagcgctatccctcaggcaacattgataacgagcgcctggccatcgccagacag
cgaatcccctatcggctcggtcgagtagttgacgattggctactcgacaaaggtcgccaa
ctgaccatcttcaacagccagacgacggtgcgtgttggtggaggtgagcgtgaaggtatg
ttccagggccagctgtctggactctactacaatggcctccgcattctcaacatggccgct
gaggggcacccccacatcagagtggaaggaagcgcaagactggtcggcgacatgccgtcc
tcttccatcaccccgcagtccagtgctgcagcgggaggcaatcgctctgactccgccccc
tccacaagtgacatcacaaccaccacagccaccaacaggaaacagggggccacacagcag
tcggcagacgacctgctggtggcgtcagctgaatgtcccagcgatgatgaagacattgac
ccctgtgaccccagttcagcccgccctcccctgccagaggttaaggtgttcccaggtcca
tctgaggtggttcgggagagcagcagcactacaggtatggtggtgggcattgtggcggct
gcagccctctgcattctcatcctcctctacgccatgtacaagtaccgcaaccgcgacgag
ggctcctaccacgtggatgagagccgcaactacatcagcaactcagccacacagcccaat
ggcagcgccaaggacaagccgctggggatcgccaagatctccaagaacaagaagaacaaa
gacaaggagtactacgtctga
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integrated database retrieval system
