Etheostoma spectabile (orangethroat darter): 116671445
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Entry
116671445 CDS
T08457
Name
(RefSeq) integrin alpha-X-like isoform X1
KO
K06461
integrin alpha M
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04145
Phagosome
esp04514
Cell adhesion molecules
esp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116671445
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116671445
09142 Cell motility
04810 Regulation of actin cytoskeleton
116671445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116671445
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esp04147
]
116671445
04515 Cell adhesion molecules [BR:
esp04515
]
116671445
04090 CD molecules [BR:
esp04090
]
116671445
00536 Glycosaminoglycan binding proteins [BR:
esp00536
]
116671445
Membrane trafficking [BR:
esp04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
116671445
Exosome [BR:
esp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116671445
Cell adhesion molecules [BR:
esp04515
]
Integrins
Integrin alpha subunits
116671445
CD molecules [BR:
esp04090
]
Proteins
116671445
Glycosaminoglycan binding proteins [BR:
esp00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
116671445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
116671445
NCBI-ProteinID:
XP_032358632
LinkDB
All DBs
Position
21:20284321..20300026
Genome browser
AA seq
1135 aa
AA seq
DB search
MDWIIATTIFSSVLQAALCFNIDPVGWKVLTNPAPGFGYQVVQRQSDLLVSAPLAQFSNK
GRGQIYKCSTESCSELSLPLPDFAVNSSLGLTMTSDPSTQNTLACGPTIPKDCKSITMYS
GICLQIDQHFNSILNYMPSSNKECRSADIAFLLDGSGSVSWMDFGTMKTFVIDLVRSLLS
LDTKLQFAVAQFSSTPSVHFYFDDFFSGTGWEAKVNGIRQQGGTTYTAAAIKYVVNQIFI
PTKGSRSNVKKVLIVITDGASHDRNDLDSAADLAEKQQIVRFAIGVGGAFTDPNAKQELN
TIASNPKESQVFQVENFAALEKIRESLQAKLFAIEGSQSGESLKMEMAQEGFSAVFLPQG
FQMGIVGANEWRGGYLPFTSRGQELRPFTLPIDSDSYLGYSMAVANTYQGPLTIIGAPRH
QHRGAVMVVFRDINQKTIDPFPWQFQSGEYFGAVVCAMDVNRDSYTDLILISAPMYIDTD
REGRVYVCSLSSLNVECHLDDSPLVLRGDASEKGRFGSSLAVLPDLNTDGFSELAVGAPL
ENGGQGSIYIFHGEGGGRINSAYSQRIAGSQVRSGLKFFGMSISQSSFDHSMDNLPDLAV
GSKGAVVLLRSKPIVMVEATVSFSPNQISTQNSDCTKALETTADICFTMTRNSYVDQAKA
MINYTLTLDANRKNSRAYIVVKQREVNGTVSLLLQKPECAKVKFFVEACPEDALNVLSNV
LRFTFDGFPSAQNLRPSLALQAQTTSFHPLGFEINCGTDNKCVDNLKVDFNFTRSSEVKV
GIDELLDVTVSVDNSEENSYNSHVILTYPVGLSYRKFTILQGRIECNSLDSEDGLTRGKT
DCTVDKPILKSNTKAFFIVSYGISTNSQLDRTIYVTANATSGNQEHSSSSVLYKKKEIDV
KYGIFATIESSLSYTNFSFGKNNLQKPFQQSIVVTNDIRAVNYTVVIKVPVKLGDKDIWV
DSSSLRIPHCQRDKDEEPKQTDFVATVQKTKVVDCSVARCSVFKCSKFLGRLVSEKYQIS
ANISSGWIEQIELRNAKFLLTSTGSLEYDRTQYIFFSTGSNNNTLVKKIEAEVEVYPEPN
FTKEIVGGSLGGLALLALLTAGLYKAGFFKSKYKEMINNDEADPGADGDPVTPLE
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggactggataattgctacaacaatattctcgtcagtgttacaagctgcgctttgtttt
aatattgatcctgtgggttggaaggtcctgactaaccctgctcctggttttggataccag
gtggtgcagagacaatcagacttgctggtcagtgctcctcttgcacagttttcaaacaaa
ggacgggggcaaatttacaagtgctccaccgaatcctgcagtgaactatcacttccattg
ccagactttgcagtcaactcgtctcttggtttgacaatgacaagtgatccctccacacaa
aacactttggcatgtggtccaaccatcccgaaagactgcaaaagtattaccatgtacagc
gggatatgcttgcagatagaccagcattttaacagcattttaaactacatgccttcttct
aataaagagtgccgatcagctgacatagcatttctgttggatggttctggcagtgtatcc
tggatggattttgggacaatgaagacttttgtgatagatctggtccgctcactcctgtcg
ctagacacaaagttacagtttgctgttgcccagttctccagcactcccagtgtccatttt
tactttgatgattttttctctggaactggatgggaagctaaagttaacggcattaggcaa
caagggggaacaacttacacagctgcagccatcaaatatgtggtcaatcagattttcata
ccaacaaagggttccaggtcaaatgtgaagaaggtcttgatagtcattaccgatggagcg
tcacacgaccggaatgacttagattctgctgcagacttagctgagaagcaacaaattgtt
cgatttgctattggagtggggggtgcatttacggatccgaatgcaaaacaggaactgaac
accattgcgtcaaatcccaaagaaagtcaagtgtttcaagtggagaactttgccgcactt
gaaaaaataagggagagcttacaggccaagctctttgcaattgaaggatcgcaaagtgga
gagtcacttaaaatggaaatggctcaagagggattcagtgcagtttttttgcctcaggga
tttcagatgggcattgtcggtgctaacgagtggaggggaggctacctgccatttacaagt
agaggccaagagctgagaccctttacgcttcctatagatagtgacagttatctgggttac
tccatggcagtcgcaaatacgtaccaaggcccattgacaattattggcgctccaagacat
caacaccgaggagctgtgatggtagtttttcgagacataaatcagaaaacgattgatccc
tttccatggcagtttcagagcggtgaatattttggagctgttgtttgtgcgatggacgtg
aatcgcgacagctacaccgacctgatcctcatatctgccccgatgtatatcgacactgac
agagaaggaagagtttacgtttgcagcttaagtagtttgaacgtggagtgtcacttagat
gattctccgttagtattaagaggggatgcatctgaaaaaggaaggtttgggtcttctctt
gctgttctgcctgatctgaacacggacggtttcagtgagctggcggttggagcgccgttg
gagaatggcggccaaggcagcatctacatattccacggcgaaggaggaggaagaatcaat
tctgcttactcccagagaattgctggctctcaagtccggtcaggactaaagttctttggc
atgtcgatcagtcagtcgtcttttgaccatagtatggacaatctgcctgacttagctgtt
ggttcaaagggtgcagttgtcctactcagatcaaagcctatagtaatggtagaagctacg
gtgtcattcagcccaaaccaaatttctactcaaaactcagactgcacaaaagctttggag
accacagctgatatctgctttaccatgaccagaaactcttacgtggaccaagctaaagcg
atgattaactatacattaactctggatgccaaccgcaaaaacagccgagcttacattgtt
gtgaaacaacgagaggtgaatggcacagtcagtcttcttttacaaaagcctgaatgcgcc
aaggtgaaattctttgttgaggcctgtccagaagatgctctcaatgtactttccaatgta
ctcagattcacctttgacggttttccttccgcccaaaatctccgtccgagtctcgccctg
caggcgcagacaacaagctttcatcctttagggtttgaaatcaactgcggcacggacaac
aaatgtgtagataatctgaaagtggatttcaactttaccagatcctcagaagttaaagtg
ggcattgatgaactgttggatgtcaccgtctcggtagataacagcgaggaaaactcctac
aacagtcatgtcattctcacatacccagtcggcctctcctataggaagttcacaattctg
cagggaagaattgagtgcaactccttggacagtgaagatggcttaacacgaggaaagaca
gactgcactgttgacaagcctattttaaagagcaatactaaggctttcttcattgtctcc
tatgggatctccaccaatagtcaacttgacagaacgatttatgtcactgccaatgctacc
agtgggaatcaggagcactctagttcaagcgtgctctacaaaaagaaagagattgatgtg
aagtatggcatttttgccacaattgaaagttccctcagctacaccaatttctctttcgga
aagaataatttgcagaaaccatttcaacaatcaattgtggtaacaaatgatatcagagca
gtaaattacactgtggtgataaaggtgccagtgaagctcggtgataaagacatctgggtg
gattcaagcagtttgcggattccacactgccaaagagacaaagatgaagaacctaaacaa
acagattttgttgctacggtacagaaaactaaggtagtggactgctctgtagccaggtgc
agtgtgttcaagtgcagtaagttcctgggaagactagttagtgaaaaataccaaatctct
gccaacatcagttctggatggatagagcagattgaacttcgtaatgccaaattcctcttg
accagcacaggcagtctggagtatgacagaacccagtacatcttcttttcaacagggtct
aataacaacactctggttaaaaagattgaagcagaggtcgaagtgtatcctgaaccaaac
ttcactaaagagatagtcggaggatccctgggaggcttggctctactggctttactcacc
gctggcctgtacaaggctggatttttcaagagcaaatacaaggagatgattaacaacgat
gaagcagatccaggagctgatggagacccagttacaccactagaataa
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