Etheostoma spectabile (orangethroat darter): 116671497
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Entry
116671497 CDS
T08457
Symbol
jmjd1c
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
esp03036
]
116671497 (jmjd1c)
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
116671497 (jmjd1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
JmjC
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
116671497
NCBI-ProteinID:
XP_032358717
LinkDB
All DBs
Position
21:5162751..5301159
Genome browser
AA seq
2884 aa
AA seq
DB search
MRISSCFCWSTSWSGPRGRREPEEREQVEEQEACCKEPRPNTKGPSRAFKPVVGKSLLSS
VTAVEFLLDRQLDFLSDHSAFQPYQDEVDSQNPVLRDNHQLHEEVRGWLKDQKVQEIFMQ
GPYSLNGYRVRVYRQDSATQWFTGIITHHDLFSRNMVVMNDQVLEPQNVDPSMIQMTFLD
DVVHSLLKGENIGITSRRRSRSSQNNNTAHMAGGRPGGTTGNTQSHYTRAQANSPRPIMT
SAGPNPKGSQGTLASQQQSQSQQSQQPASQSHHSPSSSGREQREQRNSRSSRRKGSDSSV
PEEDKDRREETPGRDSKSKAKQALNKRRKGEEEEKKAGLKRLKTDMTSDLSESSDSENPH
NKRTSCSSSSSSSSSSSSSSSSSSSEPNSENELKTRSTDAKQSGVSKKEEEEKPLMQATK
MNNSSSLIGRLSPWVELQVAEDSKKGVVKETGKMTTKEEEELVAVTQITQSPRQQTPVMS
DTVQGGSMENSKNTVKASSRSQTPLLSHLGGSSVIDITDDAQATVHQESSEAVSALLASQ
KAESTALSPYLPLNPSPVSSPPVPPSPSPSEGGRRTDIEPPMQQQQGIMGGGLTAARSLG
NKIEFAPSEVIRPVASMVQNVVLVEKEKTVLPLPLHHHHQQPQQPQHHHHQHTQQHQQQH
YTAIHPSIKSPSLSEETRKHPQQPQQPTPHKMNTVPPPDLTKSRMSPNPAQLDSLKQKPQ
HPNNSQSHPYPNTNPADLLKAKPHPGLLDISKPKPNTSPEVSKHKIQRYPDTSPPPIGRL
SAKVEPAEPPRSGFKPMPARSESGGVGPSVSSSTKSPLIIDKNETFTIYRDPALVRSDAE
NSVSATVSSNHVAAYLHPHLHTLHSPSPHSPCLTSASHSHATSHLLAPPHTSALPHPHLL
PPGVLSAMPPPAASLLGGHPRLDSPSGLGHLALPHAAAAHQQQFLQGQGPPPPPLLAQAH
SGAAGLGLYPILWQYPNGTPTSYPPGLNLPPTAKWVHPENPVTVNSEASLRRNTASPWLH
QGAGSAGDGLGLLSHVPVRPASADAHRPPVKINTHASPPLSKSNMNAHKEDVDKKGFMDP
IRTLTLAQLKQEQTDRCRTPTGKDAQLRRLYLDPNCKARQVNTQEAVQAADRASKYKEEN
RQILKESIEVAPFTAKIQRSSDPGMDRDRERSRDPAFPVRLPALASPGLKAGHIHPHVIQ
SEKSNYYTTLSNSVVNEPPRLYPSKELSSYYEKVSGGVPAVVASVGATVPSQGALSLGSY
SPKASLSKPPPLIKHQPEGGEGLAGKITEQLSQQVTLVQQQHLHHAGIDRIERRSPAISP
SSSTPLSSSSAPNHHHQHQHHHHHHHHQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQ
QLRAMPSLHRAPVFHPPTQHALERREAAEREREREKERERERERAVYGGRLSPPTLTPIQ
PVSLAAAGSKTSVEQQKPPTLLPELRDVKGHRNAAVVTSVASAISGEIMTSSTDAWRVGE
MIQERRGSFSGEKGVSRGKPQSAMASVIVRPSTAIKYNSPPGANKSGAMLPKELPQGRFY
PSKLQGECFRPGESVREAVAGRVIQPNSNLDDMCVQYKNTYMRGMQGTMGASITNSVCRT
AISAASAFSVQSISGTAISELGYSVSSRGEISSHNTGFCGRVPSHSGLGEYQEGLGSRNT
SPGGSLPPSSPAGPPQPSPSLTPTSSSISGSSQPYSSSFVHLKKHKAALAAAQSRSNFST
VPTSIATGNCFLPVESVDKTPIHNSPPPPLSQASSSSIDSSSGSSASGSTTTGKSSPLPN
GQSSGSASTSSGQPSNYHKLKKAWLTRHSEEDRNTTATICSTSTKPEKLPSITTTPTTTT
TITSTSNTSAMAEMIKPCTVNLSASTSSEVEMSKDSASKVERERQLEEKVGGGGGGEERK
AAPSSRRGNKRSYESGSESGGDDSDASESKMEGRAKRQPKPTYKKKQNDMAKKKGDNEKE
EDDVKPNGIFRSAREKTKLKLASSNGIPRSVLKDWRKVKKLKQTAESFLQDDSCAEIGPN
LQKCRECRVVRSKKGEEPTHSPVFCRFYYFRRLSFSKNGVIRMDGFSTPDQFDDEALSLW
VPGLMEESHLDQTTAKYILSFIGDKFCQMVVTENTAATWVKKDAKLAWKRAVRGVREMCD
ACEATLFNIHWVCQKCGFVVCLDCYKAKERRSSKDKELYGWLKCVKGQPHDHKHLMPTQI
IPSTVLTELVTSMHSMREKHNIKSHCPCTNKQNLLTKLPATNGVSQVLQNVLNHSNKLSL
VKAEPGSQQNSDQGGTKAETNGGRGGGSSPGSDAGSAPVTPPESQSPLHFLADLAEQKSR
EEKKENKSVLLGKSVKEDKDGDSLEVLQQCKTTSLVANSTEQGSTLRDLLTTTAGKLKLG
STDAGIAFAPVYSTASQTGKGGRTMPNILDDIIASVVENKIPASRQSITTKLSIKQEPVT
PSNNNNVPVPAITEDAKPDRKKSAHVTATGPEESTNQYPDIPHCWLNNRRLLWLKDHSNQ
NNWKLFRECWKQGQPVLVSGIHKRLNGGLWKADSFNQEFADHQGDLLNCKDQVVSNSGIK
EFWDGFEDITKRPKSKDGEPMVYRLKDWPSGEEFMALMPSRYDDLMKNLPLPEYSDPEGN
LNLASHLPSFFVRPDLGPRLCCAYGVAASQDQDFGTANLHVEVSDVVSVLVYVGVAKGNG
VLSKTGVLKRLEEEDLDEGVRRRLKDSSETPGALWHIYLNKDMDKVREFLHKEQGLDVSL
DQDPIREQGLYLSRKQRQRLLDEHGVQGWTVVQFLGDSVLIPAGAMHQVQNLHSCVQVIN
DFVSPEHVANSFHLTQELRPNKEEVNYEDKLQVKNILYHCVKEVVSSLKRAGSEEDDDNE
NENS
NT seq
8655 nt
NT seq
+upstream
nt +downstream
nt
atgaggatttccagctgtttctgctggagcaccagctggtctgggccaagaggaaggagg
gagccggaggagcgggagcaggtggaggagcaggaggcgtgctgcaaggaaccaaggcca
aacacgaaggggccctcccgggcgtttaagccagtggtggggaagagcctgttgtcgtca
gtaacggcggtggaattcttgttagaccgacagctggacttcctgtctgaccattcagcc
ttccaaccctaccaggatgaagtggacagtcagaacccagtgttaagagacaaccaccag
ctccatgaagaagtgaggggctggctcaaagaccagaaggtgcaggaaatttttatgcaa
ggtccctattcattgaatggctaccgcgtgcgtgtgtacagacaagactcggccacccag
tggttcacgggcatcattacacaccacgacctcttcagtcgaaacatggtcgttatgaat
gaccaggtgctagagcctcagaacgtggacccatctatgatccagatgacctttctggat
gacgtggttcactccctgctaaaaggagaaaacatcggcatcacttccagaagaaggtca
cgatccagccagaacaacaacactgcccacatggcgggagggagacccggcgggaccact
ggcaacactcagagtcattacacacgagcccaggccaacagcccccgccccattatgacc
tcagcaggccccaacccgaaaggttcccaggggacgctggcctctcaacagcagagccaa
tcacagcaaagccagcaaccagccagccaatcgcaccactcgcccagcagcagtgggagg
gagcagagagagcagcgcaactctcgctcctccaggaggaaaggatccgacagcagcgtt
ccagaggaggacaaggacaggagagaagagaccccagggagagactccaagtccaaggcc
aagcaggcgctgaacaaacgcaggaagggcgaggaagaggagaagaaggcaggtctaaag
aggttgaaaacagacatgacctctgacctgtcagagagcagcgactcagaaaacccacac
aacaagaggacctcatgctcctcttcctcctcatcgtcatcctcctcctcctcctcgtcc
tcctcgtcctcctcagagcccaactccgagaatgagctaaagactcgcagcactgatgcg
aaacaaagcggtgtttccaaaaaggaggaggaggagaagccgctgatgcaggccaccaaa
atgaataattcttcatctcttattggtcgcctgtccccgtgggtggagcttcaggtagcg
gaggacagcaagaagggcgtggttaaggaaacgggcaaaatgacaacgaaggaggaggag
gagttggtcgcggtaacacagatcacccaatcaccgcggcaacagacgcctgtgatgtcc
gacaccgtccagggtggcagtatggagaacagcaagaacactgtgaaagcgtcatctcga
tcccagacgccattgttgtcccacctgggaggcagcagtgtaatcgacatcacagatgat
gcccaggccacggtgcaccaggagagttcagaggcagtgtcagccctgctcgcgtcccag
aaggccgaatccacggccctctccccttacctccccctcaacccctcccccgtctcctcg
cctcccgtccctccgtctccctcaccatcagaaggaggccgcaggacggatattgagcct
cccatgcagcagcagcagggcattatgggaggtggcttgacagcagccaggagcttaggc
aacaagatagagttcgctccctctgaggttatcaggcctgtcgcatcgatggttcaaaat
gtggtgctggtggagaaggagaaaactgtccttcctcttcctcttcatcatcatcatcaa
cagccgcagcagccgcagcatcatcatcatcagcacacacaacaacatcagcagcagcac
tacacagctatccaccccagcattaagagcccgtctctgtctgaggagacgagaaaacac
ccacagcaaccacaacaaccgactccccacaagatgaacacagtccccccccctgactta
accaaatctagaatgagccccaacccagctcagcttgactccctcaaacagaaaccccag
caccccaacaactctcagagccatccctaccccaacacaaatccagctgaccttctcaag
gctaagccccacccgggcctgctggacatctctaaacctaaacccaacacctcccccgag
gtctctaaacataaaatacaaaggtaccctgatacctccccacctccgataggccgtttg
tcggctaaagtagaaccagctgagcctccgcggtctggtttcaagccgatgccggcacgg
tcggagtcggggggagtcggcccaagcgttagcagtagcaccaagagtcctctgatcatc
gataagaacgagaccttcaccatttacagggacccggcgctggtccgctcagacgcagag
aactctgtctcggccaccgtctcctccaaccacgtggcagcctatctccacccccacctg
cacacccttcattccccctcccctcactccccctgtctcacgtccgcatcccactcccac
gccacatcccacctcctcgccccccctcacacctctgccctgccacacccgcatctttta
ccccccggagtgctctcggccatgcctccccctgcagcatctctcctcgggggccaccct
aggcttgactcccccagcgggttgggccacctcgccctgcctcacgcagccgccgcacac
caacagcagttcctacagggtcagggccctcctccaccccctctactagcccaggctcac
agcggggcagcaggcctgggcctttaccccatcctctggcagtaccccaatggaacacca
acctcctaccccccagggctcaacctgccccccacagctaagtgggtccacccggaaaat
cctgtcaccgtgaattccgaggcctctctcaggaggaacacagccagtccgtggctgcac
cagggtgccggtagtgctggcgacggtctgggtttgctgagccacgttcccgttcggcct
gccagcgccgacgcccaccgtcccccggtcaagatcaacacccacgcaagccctccgctg
tcaaagtctaacatgaacgcacataaagaagatgtggataagaagggcttcatggatcca
atcaggacgttgactttggcccagctgaaacaggagcagacagacaggtgtcgaaccccc
acagggaaagacgcccaactacgccgcctctacctggaccccaactgcaaggctcgccag
gtaaatacacaagaagcggttcaggcagcagaccgagccagtaaatacaaagaggagaat
cggcaaatcctgaaagagagcatcgaggtcgctcccttcaccgctaagatccagcgctcc
agtgaccctgggatggatagggaccgagagaggagcagagatccagccttccctgtgcgg
ttaccagctctagcgtccccaggcctcaaggccggccacatccatccccacgtcatccaa
tcagagaagagcaattactacaccacgctgtccaacagtgtagtaaatgagcctccaaga
ctttacccctccaaggagctcagctcttactatgagaaagtgtctggcggagttccagca
gttgtggctagtgtcggggccactgtgccaagccagggagctctgtccctgggcagttat
agccccaaagcatccctctccaagccccctcccctcattaagcaccagccagagggagga
gagggtttagcagggaaaatcactgagcagctcagccagcaggtgacacttgtccaacag
cagcatttgcaccacgcaggtatagacaggatagaacgccgcagccctgccatttcccct
tcctcctctacgcctctctcttcctcctcagcacccaaccaccaccaccaacaccaacac
caccaccaccaccaccaccaccaacaacaacaacaacaacaacaacaacagcagcagcag
cagcagcagcagcagcagcagcagcagcagcagcagcatcagcagcagcagcagcagcaa
cagctcagggcaatgccatctctccaccgagcacctgtgttccatccgcccacacagcac
gcactagaacgcagggaggctgcagaacgagagagggagcgggagaaggaaagagagcga
gagagggaaagagcagtttatggtggacgcctgtctccgccaacactcacacccatccag
ccagttagcttagcggcagctggtagcaaaacttcagtggagcagcagaagccccccacg
ctgctgccggaactcagggacgtcaaaggtcatagaaacgctgccgtcgtcacctctgtg
gcctcggccatcagtggggagatcatgacttcatctacagacgcgtggagagttggagag
atgattcaggaaagacgaggctcattctctggtgagaaaggagtgtcaaggggcaagccc
caatccgcaatggcatccgtcattgtgcgtccatcgacagctattaagtataacagtcct
cctggtgctaacaaatctggtgctatgctccctaaagagctccctcaggggaggttctac
ccatccaagcttcagggggaatgcttcagaccaggggagagtgttagagaagctgtagct
ggcagggttatccaacctaactcgaacctggacgacatgtgtgtccagtataaaaatact
tatatgcgtggcatgcagggaactatgggggccagtatcacaaactctgtgtgcagaact
gcgatttcagccgcatcagcttttagtgtacagagtatcagtgggacagccatctctgag
ctgggctactctgtctcatctcgaggagagatctcatcccataacactggcttttgtggc
cgggtgcctagccactcaggactaggagagtaccaggaagggttaggctcacgcaacaca
tcaccaggggggtctctgcctccctctagtccagcagggccaccccaaccgagtccaagt
ctcaccccaacatcttcctccatttctggctccagtcagccttactcctcctcctttgtc
caccttaagaagcacaaagcggccttggctgccgcccagtccagaagcaacttctccact
gttccaacatccatcgcaactggaaactgcttcctacctgtggagtcagttgacaaaacc
cccatacacaattcaccccctccacccctcagccaagcctcatcgtcttcgatcgacagc
agtagcggcagctcggcaagcgggagcacaacaacgggcaagtctagtcccctgcccaac
ggccagagctctggatcagcctcgacaagcagcgggcagcccagtaactaccacaagctg
aagaaagcctggttaacccggcactcagaggaggacaggaacacaactgccactatatgc
tccaccagtactaaaccggagaaactgcccagcatcaccaccacccccaccaccaccact
accatcaccagcacaagtaacacctcagccatggcggaaatgatcaaaccctgtacagtc
aatctcagcgcctccacctccagtgaggtggagatgagcaaagacagtgcaagcaaggtg
gagcgagagaggcagctggaggagaaggtgggaggaggaggagggggggaggagaggaaa
gcagctccctcatctaggcgaggaaacaagcggtcgtacgagtcgggttcagagagcggg
ggagatgactccgacgccagtgagagcaaaatggaaggcagagccaagcgtcagcccaaa
cccacctacaagaagaagcagaatgatatggccaaaaagaaaggagacaacgaaaaggag
gaagatgacgtgaagcccaacggcatcttcagatcggcccgagagaagaccaaactcaaa
ctagccagcagcaatgggatcccccgctctgtcctgaaggactggaggaaggtgaagaag
ctgaagcagaccgcggagtctttcctgcaggatgactcgtgtgctgaaattggacccaac
ctgcagaagtgtcgggagtgcagggtggtccgcagcaagaagggagaggagccgacacat
tcccctgtcttctgtcgcttctactatttcagacggctttccttcagtaaaaatggggtc
atccggatggatggcttctccactccggaccagtttgatgatgaagcactgtccctgtgg
gtccctggactgatggaggagagccacctggaccaaaccacagccaagtacatcctcagc
ttcataggagacaagttctgtcaaatggttgtgactgagaatactgcagccacctgggtc
aagaaggatgccaagctggcgtggaagcgagcggtgaggggggtgagggagatgtgtgat
gcctgcgaggcaacactcttcaacatccactgggtctgtcagaaatgtggcttcgttgtc
tgcttggactgctacaaggccaaggagagaaggagctccaaagataaggaactatacggc
tggcttaagtgtgtgaaaggccaaccccacgatcacaaacacctgatgcccacacagatc
atacctagcacagtgctgacagagttggtgacttccatgcactctatgagagagaaacac
aacatcaaatcccactgcccctgcaccaacaagcagaacctccttaccaaactaccagcc
accaacggagtctcacaggttctgcagaacgtcctgaaccacagtaacaaactgtccctg
gtgaaagctgagccgggctctcagcagaactctgaccagggtggaaccaaggcggagact
aacggagggcgcggtggaggaagcagtccaggcagcgacgcgggaagcgctcctgtcacc
ccgcctgagtcccagtcccctctgcacttcctggctgacctggcagagcagaaatccagg
gaggagaagaaagaaaacaagtctgtgctgcttggtaaatcggtcaaggaggacaaggac
ggggacagcctggaggtcctgcagcagtgtaaaaccacttcactggtggcaaatagtaca
gagcagggctccacactcagagatctgctcaccaccacagcagggaagctgaagctgggc
tccacggatgcaggaattgcctttgcaccagtctactccactgcgtcacagactgggaaa
ggtgggaggaccatgcccaatatccttgatgacatcattgcttcagtagttgagaataaa
atccctgccagccgccagagcatcaccaccaaactgtcaatcaagcaggagcctgtcacc
ccaagcaacaacaacaacgtccctgtccctgctattactgaggatgccaaaccagacagg
aagaagtcagcgcatgttactgcaacagggccagaagaatcaaccaatcagtatccagat
attccccactgctggttaaacaacaggcggttactgtggctcaaagatcacagcaaccag
aacaactggaagctgttcagagagtgctggaaacaaggacagcctgtgttggtgtcaggg
atccataagcgactgaatggcggcctgtggaaagctgactccttcaaccaggagtttgca
gaccatcagggagacctcctgaattgtaaagaccaggttgtgtccaactctgggatcaag
gagttctgggacggatttgaggacatcactaagcggcccaagtccaaggatggagaacct
atggtctacagactgaaggactggccgtctggagaggagttcatggccctcatgccctca
aggtatgatgacttgatgaagaacctgcccctgccagagtactcggatccagagggcaac
ctcaacctggcctcccacctgccatctttctttgtcaggccggatctggggccgagacta
tgctgtgcctacggtgtagctgcatctcaggaccaggactttgggactgccaacctccat
gtggaagtctcagatgtcgtctctgtgctggtctatgtaggagtggccaaaggcaatgga
gtcctgtccaaaactggagtgttgaagcgcctagaggaggaggatctagatgagggggtc
agaagaaggctcaaagactccagtgagacaccgggggctctgtggcacatctacctcaac
aaagacatggacaaagtccgagagttcctgcacaaggagcagggattggacgtgtcgctg
gaccaggacccaatcagagagcagggcctgtacctgagcaggaagcagcggcagcggctg
ctggatgaacacggagtccagggctggactgtagttcaattcctgggagactctgtactt
ataccagcaggggccatgcaccaggtccagaacctccacagctgtgtccaggtcatcaat
gactttgtgtctcccgagcacgtggccaactccttccacctgacccaggagctccggccc
aataaagaggaggtcaactacgaggataaactacaggtgaagaacatcctgtaccactgt
gtgaaggaggtggtgagctccctgaagagggccggctctgaggaggacgatgacaacgag
aacgagaactcatga
DBGET
integrated database retrieval system
