Etheostoma spectabile (orangethroat darter): 116671719
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Entry
116671719 CDS
T08457
Symbol
sec24c
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec24C
KO
K14007
protein transport protein SEC24
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116671719 (sec24c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116671719 (sec24c)
Membrane trafficking [BR:
esp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
116671719 (sec24c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
116671719
NCBI-ProteinID:
XP_032359021
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All DBs
Position
21:complement(14523079..14546179)
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AA seq
1259 aa
AA seq
DB search
MNVNQHTPMASPYGQPQPGYGQPGYAPLDGGYPSPYAPYNGPSSAYQPGAPPQGYSPFTN
FPSKAVVANPVSDLSSPLDLGPARGPPTSGAPPGSAPQSYNQYSQGDMQNGPPPMTQAPP
RPAASQLYNQGAVNLSGPQPSYPQNYGPQPSVQQVTSQMTGMQITSGAPAPTGPGYAPPR
SSQHLASTAYSAAPPPSFTQAPPLASSALTQPPPPSGPAASQQYYGGPPPPSQQPFNSSF
PPTSQRQFPSPGPPPSSSQQTFPPSSYSGPVSPPSQAPAPSVSQSQQSFPPSQPPFSSAP
PPVSQPAFVAGPPPPTQGSFPPRAPPPSSQPGSFPHPGLPPTSVSSGQYPGPMPPQQQSP
PSQPHPYQSGPPLTRTQMPPTSMAQSNHLPPGPQGPPGPPGPMQQPPSQPGMQGGYPPQQ
NGAFGQGRGPQPGYAGPYPGQPNYGAPAPAPAPGPPAQKRLDPDAIPSPIQVIEDDRAKC
TEPFTTGVRGQVPPLVTTNFQAKDQGNASPRFVRCTAYNVPCTADMAKQSQVPLAAVIKP
LATLPPDETPPYLVDHGEAGPVRCNRCKAYMCPYMQFIEGGRRFQCGFCSCVTEVPPHYF
QHLDHTGKRVDCYDRPELSLGSYEFVATVDYCKNNKIPQPPAFIFLIDVSYNAVKSGMVN
IVCQELKTLLDYLPRENPEMDSVVRVGFVTYNKVLHFYNVKASLAQPQMLVVSDVSDMFV
PLLDGFLVNVNESRLVIESLLDQIPEMFADTRETETVFGPVIQAGLEALKAADCSGKLFV
FHTSLPIAEAPGKLKNREDKKLVGTDKEKSLFQPQVSFYNTLAKECVAQGCCVDLFLFPN
QYVDVATLGVVPVSTGGSIYKYTYFQAQSDTERFLNDLRRDVQKLVGFDAVMRVRTSTGI
RATDFFGSFFMSNTTDVELAGLDCDKAITVEFKHDDKLSEETGALMQCAVLYTSCSGQRR
LRVHNMAVNCCSQLADLYRNCETDTIINFFSKYAFRGLLTNPTKAVRDTLINQCAQILAC
YRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLMPGADVSLDDRAYLRQLISGMDVT
ESHIFFYPRLLPLTKLESGSLPVALRDSEERLSKGGVYLLETGLHLFLWVGASVQQELLL
NIFGTQSFSQIDPSLTSLPVLDNPFSQRLRDIIESFRAQRSRYMKLMVVEQEDKAELIFR
HFLVEDKSASGGASYVDFLCHMHKEIRQLSVGQKPPSFTSMTQTLTHPPPPPPPVHPSL
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaaaccagcacactccaatggcctctccatatggccagccccagcccggctat
ggccagcccggctacgcacccctggatgggggatacccctcaccttacgcaccctacaac
ggcccttcttcagcctatcagcctggggctccaccgcaaggttattctcctttcacaaac
tttccctctaaggctgtggttgccaacccagtctctgacctctcctctcctcttgactta
ggtcctgccaggggtcctcccacatctggcgcccctccaggctcagcgcctcaatcatat
aatcagtatagtcaaggggacatgcagaatggacccccacctatgacacaggccccacct
aggcctgctgcgtctcagctgtacaaccagggagctgtgaacctgtcagggccacaaccc
tcctatccccaaaactacggcccccaaccctcagtgcagcaggtcactagccagatgact
gggatgcagatcacctctggagcgccagcccctacagggccaggatatgctccacctcgc
agctcacagcatcttgccagtaccgcctactcagccgcacctccaccatctttcacccaa
gccccaccccttgcttcctctgccctgactcaaccaccacctcccagtggccctgcagca
tcccaacaatactacggaggcccaccacctccttctcaacagccatttaactcttctttt
ccccccacctctcaacggcagttcccctctcctgggccaccaccttcttcctctcagcaa
acctttcctccctcctcctactcgggccctgtgtctccacccagccaggcacctgctccc
tcagtgtcccagtcccagcagtcattccctcccagccagccgcccttctcctcagcacct
ccacctgtcagccagcctgcctttgtcgccggcccgcctcctcccacccagggctccttc
ccacctagagcaccccctccttcctctcagcctgggtcttttcctcatcctggtcttcct
ccaacctcagtttcctctggccagtacccaggccccatgccaccccaacagcagtcccct
ccatcacagccacacccctaccaatcaggccccccacttaccagaactcagatgcctcca
acttccatggcccagagcaaccacctgcctccgggaccacagggcccaccaggccctcct
gggcccatgcagcagcctccatctcagcctggcatgcagggaggataccctcctcagcag
aatggtgcgtttggacagggtagaggtcctcagcctggctatgcaggtccttatcccggg
caaccaaactacggagcccctgcacctgcccctgctcctggtccccctgcacagaaaaga
cttgacccagatgccattcctagcccgatccaggtaattgaagatgacagggctaagtgc
acggagccattcaccacaggggtcagaggtcaagtcccaccgctggtcaccaccaacttc
caggccaaagaccaagggaatgccagtcctaggtttgtccgctgtacggcctacaacgtg
ccttgcacagctgatatggccaagcagtctcaggtgcctctggccgctgtcatcaagccc
ctcgccacgctgccgccagatgagacccctccatacctggtggaccatggcgaggctggt
ccagtccgctgcaaccgttgcaaggcctacatgtgtccatacatgcagttcatcgaggga
ggtcggcgcttccagtgtggcttttgcagctgcgtcacagaggtgcctccacattacttc
cagcatctggaccacactggtaagagggtggactgctatgataggccggagctgtcactg
ggcagctacgagtttgtggccactgtcgactactgtaagaacaacaagattccacagcct
ccagcctttatcttccttattgatgtgtcctacaacgctgtgaagagcgggatggtcaac
attgtctgccaggaactcaagaccctcctagactacctgcccagggagaacccagaaatg
gactctgtagtgcgggtgggttttgtcacctacaacaaggttttgcacttctataacgtc
aaggcgagcctggcccagccccagatgttggtggtgtcagatgtatcagacatgtttgtg
cccctgctcgacggcttccttgtcaacgtaaacgagagccggcttgttattgagagtttg
ctggaccagatcccagagatgtttgcagacaccagggagacagagacagtctttggacct
gttatccaggcaggactggaggcactcaaggctgcagactgctcagggaagctgtttgtg
tttcacacctctctgcccatcgcagaggctcctggaaaactaaagaacagagaagacaag
aagctggttgggacagataaggagaagtctttgtttcagccccaggtgagtttctacaac
accctggctaaggagtgtgtagcccaaggctgttgtgtggatctcttcctcttccccaac
cagtatgtggacgttgccacattaggggtggttcctgtctccactggaggttctatctac
aaatacacctacttccaggctcagtctgacacggagcgattcctgaacgacctcagacga
gacgttcagaaactagtaggctttgatgccgtcatgagggtgcgaactagcacaggtatc
cgggcgacggacttcttcggctccttcttcatgagtaacaccacagatgtggagctggca
ggcctggactgtgacaaggccatcactgtcgagttcaaacacgacgacaagctcagcgag
gagacgggggcactcatgcagtgcgccgtgctttacaccagctgcagcggccaaaggcgt
ctccgcgtccacaacatggcggtcaactgctgctctcagctggctgacctctaccgcaac
tgtgagacggacacaatcatcaacttcttctccaaatatgctttccgaggcctcctgacc
aaccccactaaggcagtaagagacactctgatcaaccagtgtgctcagattctggcctgc
taccgaaagaactgtgcaagcccctcatcagctggtcagctgatccttccagagtgcatg
aagctgctaccggtctacctgaactgtgtgctgaagagtgacgtgctgatgccgggagca
gacgtctcgttggacgaccgggcttacctgaggcagctgatcagtggcatggacgtcaca
gagagccacatcttcttctacccccgcctgctgccactgacgaagttggaaagcgggtcg
ttgcctgtggcgttgagggactcggaggagaggctgtctaaaggcggagtttacctcttg
gaaacgggactgcacctcttcctgtgggtgggagccagcgttcagcaggagctgctgctc
aacatcttcggcacgcagagcttcagccagatagacccgagcttgacaagtctgccagtg
ctggacaaccccttctctcagagactccgagacatcatcgaatccttcagagcacagcga
tcacgatacatgaagctgatggtggtggaacaggaagacaaagctgagctgatatttagg
cacttcttggtcgaggacaaaagcgccagcggaggagcgtcatacgtggacttcttgtgt
cacatgcataaggagatccgccagctctcagtaggccaaaagccaccaagcttcaccagt
atgacccaaacactgacgcacccccccccccccccccccccggttcacccttccttgtga
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