Etheostoma spectabile (orangethroat darter): 116671801
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Entry
116671801 CDS
T08457
Name
(RefSeq) LOW QUALITY PROTEIN: VPS35 endosomal protein sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116671801
Membrane trafficking [BR:
esp04131
]
Protein recycling
Others
Retriever complex
116671801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
116671801
NCBI-ProteinID:
XP_032359166
LinkDB
All DBs
Position
21:7209231..7244631
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AA seq
971 aa
AA seq
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MAAVQWRSRGRNYEAELQRCRPEAALVEFGDYHPLKSIMVTDTKTRRGARKGSTSSSSSS
SSSAPPDPLSSMLDGTDPLSMFAAASATETPAMSHSASTGDLGRKKWEKEKEEEVVGPDF
EPWSLKRGEILARFTTTEKLSINLFMGSDRGNAPSPGSTAVSEKVRTRLEELDDLEEGSQ
RELLNLSQQEYANRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVL
ITDILDTFGRLVYDRIWTMCSDPRPLPDSFTVDDVNDTAKETCLNWFFKIASIRELLPRL
YVEAAILKCNRFLNKCGIQETLPRLTAMIRGIGDPLVAAYTRAYLCRVGVEVAPHLKDSL
NRNFFDLLGTFRQISSESVKNQLVLQRVEVPEYLTLYSPAISWILQCIAYRAPEPLLTEM
MERCKKLGNNALLLNSVMRAFRPEFVAARATDFIGMIKDCDEAGFPKHLLFGSLGRSVAC
ADPPESERLTILNEAWKVVTKVRSPQDYVNCAEIWVEFTCRHFTKREVNTVLADIIKHMT
PDRAFEDAYPQLQSVIRKILTYFHDFSVLFSMERFLPFLDMFQKDSVRVEVCRSIMEVFI
RHQVEPTRDPVILNAMLHICKTMHDSVNALTLEDEKRSLXLLIIGFIRMVRRCFGRDFEQ
QLSFCVEARATFNLESVMVQLIHTVNQLAMETNGXDERSHSRKTAAFVRACAAYSFITIP
SLSSIFSRLSLYLLSGQVALANQCLSQADAFLKAAVSLLPEVPRSISVEGKLRASESFLL
DFINNFLATLLVVPDHPEHGVLYLVRGLLNMIQDYTWEENSDAKVRVYVSALPLLAAMSQ
ETYLYSIPKVDSNETLYGGDPKFLLEINKLSETLIGQVLDHLKALGRDEQSTRRQGALAF
SLFAVLLAHGDLRNNKLSQLAVNLWNLSHKHGYCETRVSVRTLESIKQQAQQADMSHLSD
TVQRLVLQSRT
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggtgcagtggcgatccagggggcgcaactatgaggcagagctgcagagatgt
cgtcctgaggctgctctggttgagtttggagactaccatcccctcaaatccatcatggtg
acagatacaaagacccgccgtggggctcgtaaaggcagcacctcctcctcttcgtcctcc
tcctcctcggcacccccggaccccctcagctccatgctggatgggaccgaccctctctcc
atgtttgcagcagcctcggccactgagactcctgccatgtcacacagcgcctccacaggg
gacctggggaggaagaagtgggagaaggagaaggaggaagaggtggtgggtccagacttt
gagccctggtccttaaaacgaggagagatcctggccaggttcaccaccactgaaaaactc
tcaattaatcttttcatgggttctgatcgaggaaatgccccaagtccaggatccaccgct
gtgtcagagaaagttcgaactcgcctagaggaactggatgatctggaggagggttcccag
agagagctgctgaacctctcccagcaggagtacgctaaccgcatcgaggagctgaaccag
tccctgaaggaggcctgggcctcggaccagaaggtcaaagccctgaagatcgtcatccag
tgctcaaagcttctgtcagacacctcggtgatccagttctaccccagcaagtttgttctc
atcaccgatatcctcgacactttcggccgcctggtgtacgatagaatctggaccatgtgt
tcagacccacggcccctaccagactcgttcacagtcgacgatgttaacgacacggccaag
gagacgtgcctcaactggttcttcaagattgcgtccattagagagcttctgcccagatta
tacgttgaggctgctattctcaagtgcaaccgcttcttgaacaaatgcggtattcaggag
acgctccctcggttgacagccatgatcagagggattggagaccccctggtggcagcgtac
accagagcttacctctgcagggtgggcgtggaagtcgctccccacctgaaagacagcctg
aaccgcaacttcttcgacctgctgggcactttccgtcagatcagcagcgagagcgtcaag
aaccagctggtcctgcagagggtggaggtacccgagtacctgacgctttattcccccgcc
atcagctggatcctgcagtgcattgcctaccgagctccagagcctctgctaacggagatg
atggagagatgcaagaagctggggaacaatgctttgctgctgaattccgttatgagggcg
ttcaggccagagtttgttgcagccagagccaccgacttcatcgggatgatcaaagactgc
gacgaggccggcttcccaaagcatctgttgtttggctctttgggccgcagtgtggcctgt
gccgatccgccagaatcggagaggctgacgatcctaaatgaggcctggaaggtggtgacc
aaagtccgcagtcctcaggattacgtcaactgcgctgagatctgggtggagttcacctgc
cgacacttcacaaaacgtgaggtcaacacggttctggctgacatcatcaaacacatgacc
cccgaccgggcgtttgaggacgcttatcctcagctgcagtcagtgatcaggaagatcctc
acttacttccacgacttctccgtcctcttctccatggagcgtttcctgccgttcctagac
atgttccagaaggacagtgtgagggtggaggtgtgcagatccatcatggaagtcttcatc
agacaccaggtggagcccaccagagacccggtcatcctgaacgccatgttgcacatctgc
aagaccatgcacgactctgtcaacgctctcactcttgaggatgagaaaagatctttgngc
ttgctgatcatcggcttcatccgcatggtgagacgttgttttggtcgtgactttgagcag
cagctgagtttctgtgtggaggccagagccacctttaacctggagtcagtgatggtgcag
cttatccacacggtgaaccagctggcaatggagaccaacgggnntgatgagaggagtcac
tcccgcaagacagcggccttcgtcagggcgtgcgctgcctacagtttcatcaccatcccg
tctctcagcagcatcttcagtcgtctcagcctctatctgctgtctggtcaggtcgcgttg
gcaaaccagtgtctctcccaggcggatgctttcctaaaggcggcggtcagtcttctcccg
gaggtccctcgctccatcagcgtggaggggaaacttcgagcgtctgagagcttcctgctg
gacttcatcaacaacttcctggctacgctgctggttgtcccggaccatccagagcatggc
gtgctctaccttgtgcgcggtctgctcaacatgatccaggattacacctgggaggagaac
agcgatgccaaggtgcgggtctacgtcagcgctctgcccctgctggccgccatgagccag
gaaacctacctctactccatccctaaagtggactccaatgagactctttatggaggagac
cccaagttcctattggagatcaacaagctgagcgagactctgattggacaggtgcttgac
catctgaaggcactcggccgggacgagcagagcacgcggcgccagggcgctctggccttc
tccctgttcgccgtactgctggctcacggcgacctgaggaacaacaagctgagccagctg
gccgtcaacctgtggaacctcagccacaaacacggatactgtgagacccgcgtctcggtt
cggaccctggagtccatcaaacagcaggctcagcaggcggacatgagccacctgtcggac
acagtccagcggctggtgctgcagtcccgcacctga
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